RNA–Protein interactions for RNA: ENST00000534532.6

NCAPD3-213, Transcript of non-SMC condensin II complex subunit D3, human

TSL 2

Gene NCAPD3, Length 5,539 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCAPD3-213	ENST00000534532	OR10K2	Q6IF99	312 aa		14.05	□□□□□ -0.16
NCAPD3-213	ENST00000534532	RHOU	Q7L0Q8	258 aa		14.05	□□□□□ -0.16
NCAPD3-213	ENST00000534532	CALHM3	Q86XJ0	350 aa		14.05	□□□□□ -0.16
NCAPD3-213	ENST00000534532	TINAGL1	Q9GZM7	467 aa	Predicted RBP	14.05	□□□□□ -0.16
NCAPD3-213	ENST00000534532	RYDEN	Q9NUL5	291 aa	Known RBP	14.05	□□□□□ -0.16
NCAPD3-213	ENST00000534532	PLPP3	O14495	311 aa		14.04	□□□□□ -0.16
NCAPD3-213	ENST00000534532	GOSR1	O95249	250 aa		14.04	□□□□□ -0.16
NCAPD3-213	ENST00000534532	COX6B1	P14854	86 aa		14.04	□□□□□ -0.16
NCAPD3-213	ENST00000534532	PCMT1	P22061	227 aa		14.04	□□□□□ -0.16
NCAPD3-213	ENST00000534532	CASP3	P42574	277 aa		14.04	□□□□□ -0.16
NCAPD3-213	ENST00000534532	KIAA0040	Q15053	153 aa		14.04	□□□□□ -0.16
NCAPD3-213	ENST00000534532	HMGN3	Q15651	99 aa		14.04	□□□□□ -0.16
NCAPD3-213	ENST00000534532	HIST2H3PS2	Q5TEC6	136 aa		14.04	□□□□□ -0.16
NCAPD3-213	ENST00000534532	TMEM104	Q8NE00	496 aa		14.04	□□□□□ -0.16
NCAPD3-213	ENST00000534532	C4orf45	Q96LM5	186 aa		14.04	□□□□□ -0.16
NCAPD3-213	ENST00000534532	ZNF75A	Q96N20	296 aa		14.04	□□□□□ -0.16
NCAPD3-213	ENST00000534532	PUS1	Q9Y606	427 aa	Known RBP eCLIP	14.04	□□□□□ -0.16
NCAPD3-213	ENST00000534532	ASCC3	Q8N3C0	2202 aa	Known RBP	14.04	□□□□□ -0.16
NCAPD3-213	ENST00000534532	ZBTB25	P24278	435 aa		14.04	□□□□□ -0.16
NCAPD3-213	ENST00000534532	OR2T6	Q8NHC8	308 aa		14.04	□□□□□ -0.16
NCAPD3-213	ENST00000534532	TMEM56	Q96MV1	263 aa		14.04	□□□□□ -0.16
NCAPD3-213	ENST00000534532	DDO	Q99489	341 aa		14.04	□□□□□ -0.16
NCAPD3-213	ENST00000534532	MS4A5	Q9H3V2	200 aa		14.04	□□□□□ -0.16
NCAPD3-213	ENST00000534532	OR2M7	Q8NG81	312 aa		14.04	□□□□□ -0.16
NCAPD3-213	ENST00000534532	OR8B3	Q8NGG8	313 aa		14.04	□□□□□ -0.16
NCAPD3-213	ENST00000534532	OR8B2	Q96RD0	313 aa		14.04	□□□□□ -0.16
NCAPD3-213	ENST00000534532	OR5B21	A6NL26	309 aa		14.04	□□□□□ -0.16
NCAPD3-213	ENST00000534532	HRAS	P01112	189 aa		14.04	□□□□□ -0.16
NCAPD3-213	ENST00000534532	KCNJ3	P48549	501 aa		14.04	□□□□□ -0.16
NCAPD3-213	ENST00000534532	RAB7A	P51149	207 aa		14.04	□□□□□ -0.16
NCAPD3-213	ENST00000534532	KRTCAP3	Q53RY4	240 aa		14.04	□□□□□ -0.16
NCAPD3-213	ENST00000534532	SOHLH1	Q5JUK2	328 aa		14.04	□□□□□ -0.16
NCAPD3-213	ENST00000534532	C17orf50	Q8WW18	174 aa		14.04	□□□□□ -0.16
NCAPD3-213	ENST00000534532	GON7	Q9BXV9	100 aa		14.04	□□□□□ -0.16
NCAPD3-213	ENST00000534532	CHST6	Q9GZX3	395 aa		14.04	□□□□□ -0.16
NCAPD3-213	ENST00000534532	SKP2	Q13309	424 aa		14.04	□□□□□ -0.16
NCAPD3-213	ENST00000534532	CBLN3	Q6UW01	205 aa		14.04	□□□□□ -0.16
NCAPD3-213	ENST00000534532	SLC51B	Q86UW2	128 aa		14.04	□□□□□ -0.16
NCAPD3-213	ENST00000534532	TUSC5	Q8IXB3	177 aa		14.04	□□□□□ -0.16
NCAPD3-213	ENST00000534532	MPC1	Q9Y5U8	109 aa		14.04	□□□□□ -0.16
NCAPD3-213	ENST00000534532	TXNL1	O43396	289 aa		14.03	□□□□□ -0.16
NCAPD3-213	ENST00000534532	COX7A1	P24310	79 aa		14.03	□□□□□ -0.16
NCAPD3-213	ENST00000534532	BRS3	P32247	399 aa		14.03	□□□□□ -0.16
NCAPD3-213	ENST00000534532	DDA1	Q9BW61	102 aa		14.03	□□□□□ -0.16
NCAPD3-213	ENST00000534532	DUSP21	Q9H596	190 aa		14.03	□□□□□ -0.16
NCAPD3-213	ENST00000534532	RANGRF	Q9HD47	186 aa	Predicted RBP	14.03	□□□□□ -0.16
NCAPD3-213	ENST00000534532	GPX5	O75715	221 aa		14.03	□□□□□ -0.16
NCAPD3-213	ENST00000534532	WNT3	P56703	355 aa		14.03	□□□□□ -0.16
NCAPD3-213	ENST00000534532	ALKAL2	Q6UX46	152 aa		14.03	□□□□□ -0.16
NCAPD3-213	ENST00000534532	GNPNAT1	Q96EK6	184 aa	Predicted RBP	14.03	□□□□□ -0.16
NCAPD3-213	ENST00000534532	ZNF764	Q96H86	408 aa	Predicted RBP	14.03	□□□□□ -0.16
NCAPD3-213	ENST00000534532	BARX1	Q9HBU1	254 aa	Predicted RBP	14.03	□□□□□ -0.16
NCAPD3-213	ENST00000534532	MTCH1	Q9NZJ7	389 aa		14.03	□□□□□ -0.16
NCAPD3-213	ENST00000534532	NTM	Q9P121	344 aa		14.03	□□□□□ -0.16
NCAPD3-213	ENST00000534532	OR5V1	Q9UGF6	321 aa		14.03	□□□□□ -0.16
NCAPD3-213	ENST00000534532	ARAP2	Q8WZ64	1704 aa		14.03	□□□□□ -0.16
NCAPD3-213	ENST00000534532	FCN2	Q15485	313 aa		14.03	□□□□□ -0.16
NCAPD3-213	ENST00000534532	RTN4IP1	Q8WWV3	396 aa	Predicted RBP	14.03	□□□□□ -0.16
NCAPD3-213	ENST00000534532	TCRBV16S1A1N1	A0A5B0	115 aa		14.03	□□□□□ -0.16
NCAPD3-213	ENST00000534532	SLC17A2	O00624	439 aa		14.03	□□□□□ -0.16
NCAPD3-213	ENST00000534532	MDH2	P40926	338 aa	Known RBP	14.03	□□□□□ -0.16
NCAPD3-213	ENST00000534532	SLC7A6	Q92536	515 aa		14.03	□□□□□ -0.16
NCAPD3-213	ENST00000534532	DPF1	Q92782	380 aa		14.03	□□□□□ -0.16
NCAPD3-213	ENST00000534532	UBR3	Q6ZT12	1888 aa		14.03	□□□□□ -0.16
NCAPD3-213	ENST00000534532	ZFP36L2	P47974	494 aa	Known RBP	14.02	□□□□□ -0.16
NCAPD3-213	ENST00000534532	MNX1	P50219	401 aa	Predicted RBP	14.02	□□□□□ -0.16
NCAPD3-213	ENST00000534532	BTG1	P62324	171 aa		14.02	□□□□□ -0.16
NCAPD3-213	ENST00000534532	IGFBP7	Q16270	282 aa		14.02	□□□□□ -0.16
NCAPD3-213	ENST00000534532	C3AR1	Q16581	482 aa		14.02	□□□□□ -0.16
NCAPD3-213	ENST00000534532	DMRTC1	Q5HYR2	192 aa		14.02	□□□□□ -0.16
NCAPD3-213	ENST00000534532	LYG1	Q8N1E2	194 aa		14.02	□□□□□ -0.16
NCAPD3-213	ENST00000534532	SFT2D1	Q8WV19	159 aa		14.02	□□□□□ -0.16
NCAPD3-213	ENST00000534532	ISG20L2	Q9H9L3	353 aa	Known RBP	14.02	□□□□□ -0.16
NCAPD3-213	ENST00000534532	CCL3	P10147	92 aa		14.02	□□□□□ -0.16
NCAPD3-213	ENST00000534532	HRH1	P35367	487 aa		14.02	□□□□□ -0.16
NCAPD3-213	ENST00000534532	GNG10	P50151	68 aa		14.02	□□□□□ -0.16
NCAPD3-213	ENST00000534532	MLF1	P58340	268 aa		14.02	□□□□□ -0.16
NCAPD3-213	ENST00000534532	CCDC71	Q8IV32	467 aa	Predicted RBP	14.02	□□□□□ -0.16
NCAPD3-213	ENST00000534532	OR10V1	Q8NGI7	309 aa		14.02	□□□□□ -0.16
NCAPD3-213	ENST00000534532	TSPAN32	Q96QS1	320 aa		14.02	□□□□□ -0.16
NCAPD3-213	ENST00000534532	ZNF416	Q9BWM5	594 aa		14.02	□□□□□ -0.16
NCAPD3-213	ENST00000534532	ZNF225	Q9UK10	706 aa		14.02	□□□□□ -0.16
NCAPD3-213	ENST00000534532	SPTA1	P02549	2419 aa		14.02	□□□□□ -0.17
NCAPD3-213	ENST00000534532	EML2	O95834	649 aa		14.02	□□□□□ -0.17
NCAPD3-213	ENST00000534532	MPG	P29372	298 aa		14.02	□□□□□ -0.17
NCAPD3-213	ENST00000534532	CLDN23	Q96B33	292 aa		14.02	□□□□□ -0.17
NCAPD3-213	ENST00000534532	NIPSNAP3B	Q9BS92	247 aa		14.02	□□□□□ -0.17
NCAPD3-213	ENST00000534532	C3orf80	F5H4A9	247 aa		14.02	□□□□□ -0.17
NCAPD3-213	ENST00000534532	PIGP	P57054	158 aa		14.02	□□□□□ -0.17
NCAPD3-213	ENST00000534532	FABP5	Q01469	135 aa		14.02	□□□□□ -0.17
NCAPD3-213	ENST00000534532	ACOT6	Q3I5F7	207 aa	Predicted RBP	14.02	□□□□□ -0.17
NCAPD3-213	ENST00000534532	SVBP	Q8N300	66 aa		14.02	□□□□□ -0.17
NCAPD3-213	ENST00000534532	PTP4A1	Q93096	173 aa		14.02	□□□□□ -0.17
NCAPD3-213	ENST00000534532	SOX7	Q9BT81	388 aa		14.02	□□□□□ -0.17
NCAPD3-213	ENST00000534532	SAP30L	Q9HAJ7	183 aa		14.02	□□□□□ -0.17
NCAPD3-213	ENST00000534532	PCYT1B	Q9Y5K3	369 aa	Predicted RBP	14.02	□□□□□ -0.17
NCAPD3-213	ENST00000534532	GPR31	O00270	319 aa		14.01	□□□□□ -0.17
NCAPD3-213	ENST00000534532	CCS	O14618	274 aa		14.01	□□□□□ -0.17
NCAPD3-213	ENST00000534532	FABP7	O15540	132 aa		14.01	□□□□□ -0.17
NCAPD3-213	ENST00000534532	DGCR2	P98153	550 aa		14.01	□□□□□ -0.17

Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms