RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 MPC1Q9Y5U8 109 aa8.67□□□□□ -1.02
CAPN1-225ENST00000533704 A0A1B0GW55 424 aa8.66□□□□□ -1.02
CAPN1-225ENST00000533704 SAC3D1A6NKF1 404 aa8.66□□□□□ -1.02
CAPN1-225ENST00000533704 PRR32B1ATL7 298 aa8.66□□□□□ -1.02
CAPN1-225ENST00000533704 ZNF879B4DU55 563 aa8.66□□□□□ -1.02
CAPN1-225ENST00000533704 MAGEB4O15481 346 aaPredicted RBP8.66□□□□□ -1.02
CAPN1-225ENST00000533704 ATP5HO75947 161 aa8.66□□□□□ -1.02
CAPN1-225ENST00000533704 TOX4O94842 621 aa8.66□□□□□ -1.02
CAPN1-225ENST00000533704 PLATP00750 562 aa8.66□□□□□ -1.02
CAPN1-225ENST00000533704 LHBP01229 141 aa8.66□□□□□ -1.02
CAPN1-225ENST00000533704 DUX4L2P0CJ85 424 aa8.66□□□□□ -1.02
CAPN1-225ENST00000533704 DUX4L3P0CJ86 424 aa8.66□□□□□ -1.02
CAPN1-225ENST00000533704 DUX4L4P0CJ87 422 aa8.66□□□□□ -1.02
CAPN1-225ENST00000533704 DUX4L5P0CJ88 424 aa8.66□□□□□ -1.02
CAPN1-225ENST00000533704 DUX4L6P0CJ89 424 aa8.66□□□□□ -1.02
CAPN1-225ENST00000533704 DUX4L7P0CJ90 424 aa8.66□□□□□ -1.02
CAPN1-225ENST00000533704 PPIAL4GP0DN37 164 aa8.66□□□□□ -1.02
CAPN1-225ENST00000533704 PRTN3P24158 256 aa8.66□□□□□ -1.02
CAPN1-225ENST00000533704 EPHA2P29317 976 aa8.66□□□□□ -1.02
CAPN1-225ENST00000533704 CFHR2P36980 270 aa8.66□□□□□ -1.02
CAPN1-225ENST00000533704 MAP2K3P46734 347 aa8.66□□□□□ -1.02
CAPN1-225ENST00000533704 RIDAP52758 137 aaKnown RBP8.66□□□□□ -1.02
CAPN1-225ENST00000533704 ARF6P62330 175 aa8.66□□□□□ -1.02
CAPN1-225ENST00000533704 ESRRGP62508 458 aa8.66□□□□□ -1.02
CAPN1-225ENST00000533704 IKZF1Q13422 519 aa8.66□□□□□ -1.02
CAPN1-225ENST00000533704 ZSCAN26Q16670 478 aa8.66□□□□□ -1.02
CAPN1-225ENST00000533704 AWAT1Q58HT5 328 aa8.66□□□□□ -1.02
CAPN1-225ENST00000533704 DMRTC1Q5HYR2 192 aa8.66□□□□□ -1.02
CAPN1-225ENST00000533704 WDR38Q5JTN6 314 aa8.66□□□□□ -1.02
CAPN1-225ENST00000533704 CEP78Q5JTW2 689 aa8.66□□□□□ -1.02
CAPN1-225ENST00000533704 METTL11BQ5VVY1 283 aa8.66□□□□□ -1.02
CAPN1-225ENST00000533704 DUX4L9Q6RFH8 374 aaPredicted RBP8.66□□□□□ -1.02
CAPN1-225ENST00000533704 BTN2A1Q7KYR7 527 aa8.66□□□□□ -1.02
CAPN1-225ENST00000533704 MEPCEQ7L2J0 689 aaKnown RBP8.66□□□□□ -1.02
CAPN1-225ENST00000533704 THAP5Q7Z6K1 395 aa8.66□□□□□ -1.02
CAPN1-225ENST00000533704 ZDHHC13Q8IUH4 622 aa8.66□□□□□ -1.02
CAPN1-225ENST00000533704 SLC35F2Q8IXU6 374 aa8.66□□□□□ -1.02
CAPN1-225ENST00000533704 FGFRL1Q8N441 504 aa8.66□□□□□ -1.02
CAPN1-225ENST00000533704 GALNT4Q8N4A0 578 aa8.66□□□□□ -1.02
CAPN1-225ENST00000533704 FAM216BQ8N7L0 139 aa8.66□□□□□ -1.02
CAPN1-225ENST00000533704 PNLDC1Q8NA58 520 aaKnown RBP8.66□□□□□ -1.02
CAPN1-225ENST00000533704 OR5T2Q8NGG2 359 aa8.66□□□□□ -1.02
CAPN1-225ENST00000533704 OR51E1Q8TCB6 317 aa8.66□□□□□ -1.02
CAPN1-225ENST00000533704 LRTOMTQ8WZ04 291 aa8.66□□□□□ -1.02
CAPN1-225ENST00000533704 OR5P3Q8WZ94 311 aa8.66□□□□□ -1.02
CAPN1-225ENST00000533704 OR8B4Q96RC9 309 aa8.66□□□□□ -1.02
CAPN1-225ENST00000533704 IL4I1Q96RQ9 567 aa8.66□□□□□ -1.02
CAPN1-225ENST00000533704 PBOV1Q9GZY1 135 aa8.66□□□□□ -1.02
CAPN1-225ENST00000533704 SEMA6AQ9H2E6 1030 aa8.66□□□□□ -1.02
CAPN1-225ENST00000533704 ABCB9Q9NP78 766 aa8.66□□□□□ -1.02
CAPN1-225ENST00000533704 DNAJB11Q9UBS4 358 aa8.66□□□□□ -1.02
CAPN1-225ENST00000533704 DUX4Q9UBX2 424 aa8.66□□□□□ -1.02
CAPN1-225ENST00000533704 TMEM14AQ9Y6G1 99 aa8.66□□□□□ -1.02
CAPN1-225ENST00000533704 ZNF816-ZNF321PA0A0X1KG74 233 aa8.65□□□□□ -1.02
CAPN1-225ENST00000533704 NKX6-3A6NJ46 265 aa8.65□□□□□ -1.02
CAPN1-225ENST00000533704 TMEM210A6NLX4 147 aa8.65□□□□□ -1.02
CAPN1-225ENST00000533704 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.65□□□□□ -1.02
CAPN1-225ENST00000533704 TNFRSF13BO14836 293 aaPredicted RBP8.65□□□□□ -1.02
CAPN1-225ENST00000533704 AKR7A2O43488 359 aa8.65□□□□□ -1.02
CAPN1-225ENST00000533704 NDUFB3O43676 98 aa8.65□□□□□ -1.02
CAPN1-225ENST00000533704 CST4P01036 141 aa8.65□□□□□ -1.02
CAPN1-225ENST00000533704 TFF1P04155 84 aa8.65□□□□□ -1.02
CAPN1-225ENST00000533704 FCGR1AP12314 374 aa8.65□□□□□ -1.02
CAPN1-225ENST00000533704 MUC1P15941 1255 aaPredicted RBP8.65□□□□□ -1.02
CAPN1-225ENST00000533704 GPM6AP51674 278 aa8.65□□□□□ -1.02
CAPN1-225ENST00000533704 CXCR4P61073 352 aa8.65□□□□□ -1.02
CAPN1-225ENST00000533704 MFGE8Q08431 387 aaPredicted RBP8.65□□□□□ -1.02
CAPN1-225ENST00000533704 DEFB112Q30KQ8 113 aa8.65□□□□□ -1.02
CAPN1-225ENST00000533704 ZNF829Q3KNS6 432 aaPredicted RBP8.65□□□□□ -1.02
CAPN1-225ENST00000533704 SLX4IPQ5VYV7 408 aa8.65□□□□□ -1.02
CAPN1-225ENST00000533704 TEX36Q5VZQ5 186 aa8.65□□□□□ -1.02
CAPN1-225ENST00000533704 ZNF322Q6U7Q0 402 aaPredicted RBP8.65□□□□□ -1.02
CAPN1-225ENST00000533704 PLEKHG7Q6ZR37 379 aa8.65□□□□□ -1.02
CAPN1-225ENST00000533704 MOB3CQ70IA8 216 aa8.65□□□□□ -1.02
CAPN1-225ENST00000533704 SLC36A1Q7Z2H8 476 aa8.65□□□□□ -1.02
CAPN1-225ENST00000533704 PDZD9Q8IXQ8 264 aa8.65□□□□□ -1.02
CAPN1-225ENST00000533704 ZNF679Q8IYX0 411 aa8.65□□□□□ -1.02
CAPN1-225ENST00000533704 SCCPDHQ8NBX0 429 aa8.65□□□□□ -1.02
CAPN1-225ENST00000533704 TMEM163Q8TC26 289 aa8.65□□□□□ -1.02
CAPN1-225ENST00000533704 ASB17Q8WXJ9 295 aa8.65□□□□□ -1.02
CAPN1-225ENST00000533704 H1FXQ92522 213 aaKnown RBP8.65□□□□□ -1.02
CAPN1-225ENST00000533704 TAF15Q92804 592 aaKnown RBP eCLIP8.65□□□□□ -1.02
CAPN1-225ENST00000533704 LHX4Q969G2 390 aa8.65□□□□□ -1.02
CAPN1-225ENST00000533704 PPP1R14AQ96A00 147 aa8.65□□□□□ -1.02
CAPN1-225ENST00000533704 SLC25A28Q96A46 364 aa8.65□□□□□ -1.02
CAPN1-225ENST00000533704 C1orf147Q96MC9 270 aaPredicted RBP8.65□□□□□ -1.02
CAPN1-225ENST00000533704 WDFY2Q96P53 400 aa8.65□□□□□ -1.02
CAPN1-225ENST00000533704 TBX5Q99593 518 aa8.65□□□□□ -1.02
CAPN1-225ENST00000533704 APOL4Q9BPW4 351 aa8.65□□□□□ -1.02
CAPN1-225ENST00000533704 FGF23Q9GZV9 251 aaPredicted RBP8.65□□□□□ -1.02
CAPN1-225ENST00000533704 WDR13Q9H1Z4 485 aa8.65□□□□□ -1.02
CAPN1-225ENST00000533704 RIBC2Q9H4K1 309 aa8.65□□□□□ -1.02
CAPN1-225ENST00000533704 GPR84Q9NQS5 396 aa8.65□□□□□ -1.02
CAPN1-225ENST00000533704 FAM206AQ9NX38 181 aa8.65□□□□□ -1.02
CAPN1-225ENST00000533704 ONECUT1Q9UBC0 465 aa8.65□□□□□ -1.02
CAPN1-225ENST00000533704 ZNF391Q9UJN7 358 aa8.65□□□□□ -1.02
CAPN1-225ENST00000533704 ACOD1A6NK06 481 aa8.64□□□□□ -1.03
CAPN1-225ENST00000533704 SLC22A31A6NKX4 558 aa8.64□□□□□ -1.03
CAPN1-225ENST00000533704 ZAR1LA6NP61 321 aa8.64□□□□□ -1.03
CAPN1-225ENST00000533704 SRRM5B3KS81 715 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms