RNA–Protein interactions for RNA: ENST00000532600.1

SSH3-209, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 555 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-209ENST00000532600 FAM3AP98173 230 aa15.76■□□□□ 0.11
SSH3-209ENST00000532600 TMED1Q13445 227 aa15.76■□□□□ 0.11
SSH3-209ENST00000532600 TAF13Q15543 124 aa15.76■□□□□ 0.11
SSH3-209ENST00000532600 SFRP4Q6FHJ7 346 aaPredicted RBP15.76■□□□□ 0.11
SSH3-209ENST00000532600 C11orf53Q8IXP5 236 aa15.76■□□□□ 0.11
SSH3-209ENST00000532600 OR11L1Q8NGX0 322 aa15.76■□□□□ 0.11
SSH3-209ENST00000532600 FBLIM1Q8WUP2 373 aa15.76■□□□□ 0.11
SSH3-209ENST00000532600 RFKQ969G6 155 aa15.76■□□□□ 0.11
SSH3-209ENST00000532600 UPRTQ96BW1 309 aa15.76■□□□□ 0.11
SSH3-209ENST00000532600 LGALS12Q96DT0 336 aa15.76■□□□□ 0.11
SSH3-209ENST00000532600 FN3KRPQ9HA64 309 aa15.76■□□□□ 0.11
SSH3-209ENST00000532600 CLN6Q9NWW5 311 aa15.76■□□□□ 0.11
SSH3-209ENST00000532600 RNF7Q9UBF6 113 aa15.76■□□□□ 0.11
SSH3-209ENST00000532600 LAMP5Q9UJQ1 280 aa15.76■□□□□ 0.11
SSH3-209ENST00000532600 hCG_38984A0A1B0GV85 526 aa15.75■□□□□ 0.11
SSH3-209ENST00000532600 PSMD9O00233 223 aa15.75■□□□□ 0.11
SSH3-209ENST00000532600 XRCC2O43543 280 aa15.75■□□□□ 0.11
SSH3-209ENST00000532600 PLATP00750 562 aa15.75■□□□□ 0.11
SSH3-209ENST00000532600 PPIAL4GP0DN37 164 aa15.75■□□□□ 0.11
SSH3-209ENST00000532600 DBTP11182 482 aaKnown RBP15.75■□□□□ 0.11
SSH3-209ENST00000532600 IRF2P14316 349 aa15.75■□□□□ 0.11
SSH3-209ENST00000532600 EGR1P18146 543 aa15.75■□□□□ 0.11
SSH3-209ENST00000532600 MTNR1AP48039 350 aa15.75■□□□□ 0.11
SSH3-209ENST00000532600 ZNF121P58317 390 aaPredicted RBP15.75■□□□□ 0.11
SSH3-209ENST00000532600 GRB2P62993 217 aaKnown RBP15.75■□□□□ 0.11
SSH3-209ENST00000532600 IL18R1Q13478 541 aa15.75■□□□□ 0.11
SSH3-209ENST00000532600 LRRN1Q6UXK5 716 aa15.75■□□□□ 0.11
SSH3-209ENST00000532600 GCSAMQ8N6F7 178 aa15.75■□□□□ 0.11
SSH3-209ENST00000532600 PLPP7Q8NBV4 271 aa15.75■□□□□ 0.11
SSH3-209ENST00000532600 GCDHQ92947 438 aaPredicted RBP15.75■□□□□ 0.11
SSH3-209ENST00000532600 DUX5Q96PT3 197 aa15.75■□□□□ 0.11
SSH3-209ENST00000532600 TBX5Q99593 518 aa15.75■□□□□ 0.11
SSH3-209ENST00000532600 C1orf123Q9NWV4 160 aa15.75■□□□□ 0.11
SSH3-209ENST00000532600 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.75■□□□□ 0.11
SSH3-209ENST00000532600 A0A1W2PQL4 384 aaPredicted RBP15.74■□□□□ 0.11
SSH3-209ENST00000532600 DNAJC9-AS1A6NH13 148 aa15.74■□□□□ 0.11
SSH3-209ENST00000532600 C3orf80F5H4A9 247 aa15.74■□□□□ 0.11
SSH3-209ENST00000532600 LGALS8O00214 317 aa15.74■□□□□ 0.11
SSH3-209ENST00000532600 PHYHO14832 338 aa15.74■□□□□ 0.11
SSH3-209ENST00000532600 TBX1O43435 398 aa15.74■□□□□ 0.11
SSH3-209ENST00000532600 LHBP01229 141 aa15.74■□□□□ 0.11
SSH3-209ENST00000532600 ANXA2P07355 339 aaKnown RBP15.74■□□□□ 0.11
SSH3-209ENST00000532600 VHLP40337 213 aa15.74■□□□□ 0.11
SSH3-209ENST00000532600 ROM1Q03395 351 aa15.74■□□□□ 0.11
SSH3-209ENST00000532600 C9orf139Q6ZV77 190 aa15.74■□□□□ 0.11
SSH3-209ENST00000532600 FAM57BQ71RH2 274 aa15.74■□□□□ 0.11
SSH3-209ENST00000532600 BOLLQ8N9W6 283 aaKnown RBP15.74■□□□□ 0.11
SSH3-209ENST00000532600 REEP6Q96HR9 211 aa15.74■□□□□ 0.11
SSH3-209ENST00000532600 NUDT16L1Q9BRJ7 211 aaKnown RBP15.74■□□□□ 0.11
SSH3-209ENST00000532600 VCX3BQ9H321 246 aa15.74■□□□□ 0.11
SSH3-209ENST00000532600 OPA3Q9H6K4 179 aa15.74■□□□□ 0.11
SSH3-209ENST00000532600 SMURF1Q9HCE7 757 aa15.74■□□□□ 0.11
SSH3-209ENST00000532600 CLN8Q9UBY8 286 aa15.74■□□□□ 0.11
SSH3-209ENST00000532600 EXOGQ9Y2C4 368 aaKnown RBP15.74■□□□□ 0.11
SSH3-209ENST00000532600 GRPP07492 148 aa15.73■□□□□ 0.11
SSH3-209ENST00000532600 SLC15A1P46059 708 aa15.73■□□□□ 0.11
SSH3-209ENST00000532600 CXCR4P61073 352 aa15.73■□□□□ 0.11
SSH3-209ENST00000532600 ZNF85Q03923 595 aa15.73■□□□□ 0.11
SSH3-209ENST00000532600 POU4F2Q12837 409 aa15.73■□□□□ 0.11
SSH3-209ENST00000532600 ZNF684Q5T5D7 378 aa15.73■□□□□ 0.11
SSH3-209ENST00000532600 ZNF322Q6U7Q0 402 aaPredicted RBP15.73■□□□□ 0.11
SSH3-209ENST00000532600 BTNL3Q6UXE8 466 aa15.73■□□□□ 0.11
SSH3-209ENST00000532600 NLRC3Q7RTR2 1065 aa15.73■□□□□ 0.11
SSH3-209ENST00000532600 FAM90A1Q86YD7 464 aa15.73■□□□□ 0.11
SSH3-209ENST00000532600 C8orf59Q8N0T1 100 aaPredicted RBP15.73■□□□□ 0.11
SSH3-209ENST00000532600 SETD9Q8NE22 299 aa15.73■□□□□ 0.11
SSH3-209ENST00000532600 OR10H4Q8NGA5 316 aa15.73■□□□□ 0.11
SSH3-209ENST00000532600 Q96MT0 163 aa15.73■□□□□ 0.11
SSH3-209ENST00000532600 OR8B4Q96RC9 309 aa15.73■□□□□ 0.11
SSH3-209ENST00000532600 RASSF4Q9H2L5 321 aa15.73■□□□□ 0.11
SSH3-209ENST00000532600 MRM2Q9UI43 246 aaKnown RBP15.73■□□□□ 0.11
SSH3-209ENST00000532600 NOP16Q9Y3C1 178 aaKnown RBP15.73■□□□□ 0.11
SSH3-209ENST00000532600 LRP12Q9Y561 859 aa15.73■□□□□ 0.11
SSH3-209ENST00000532600 HSPE1-MOB4S4R3N1 261 aa15.73■□□□□ 0.11
SSH3-209ENST00000532600 TRAV40A0A0B4J280 105 aa15.72■□□□□ 0.11
SSH3-209ENST00000532600 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.72■□□□□ 0.11
SSH3-209ENST00000532600 H2BFMP0C1H6 154 aa15.72■□□□□ 0.11
SSH3-209ENST00000532600 OR2T7P0C7T2 308 aa15.72■□□□□ 0.11
SSH3-209ENST00000532600 HSD11B1P28845 292 aa15.72■□□□□ 0.11
SSH3-209ENST00000532600 GSK3AP49840 483 aa15.72■□□□□ 0.11
SSH3-209ENST00000532600 FGF12P61328 243 aa15.72■□□□□ 0.11
SSH3-209ENST00000532600 AWAT1Q58HT5 328 aa15.72■□□□□ 0.11
SSH3-209ENST00000532600 RHOUQ7L0Q8 258 aa15.72■□□□□ 0.11
SSH3-209ENST00000532600 THAP5Q7Z6K1 395 aa15.72■□□□□ 0.11
SSH3-209ENST00000532600 SPERTQ8NA61 448 aa15.72■□□□□ 0.11
SSH3-209ENST00000532600 OR2T27Q8NH04 317 aa15.72■□□□□ 0.11
SSH3-209ENST00000532600 MNTQ99583 582 aa15.72■□□□□ 0.11
SSH3-209ENST00000532600 ZNF649Q9BS31 505 aa15.72■□□□□ 0.11
SSH3-209ENST00000532600 FGF23Q9GZV9 251 aaPredicted RBP15.72■□□□□ 0.11
SSH3-209ENST00000532600 BRD7Q9NPI1 651 aa15.72■□□□□ 0.11
SSH3-209ENST00000532600 MRPS18AQ9NVS2 196 aaKnown RBP15.72■□□□□ 0.11
SSH3-209ENST00000532600 MYRFQ9Y2G1 1151 aa15.72■□□□□ 0.11
SSH3-209ENST00000532600 RHBDD3Q9Y3P4 386 aa15.72■□□□□ 0.11
SSH3-209ENST00000532600 TMEM14AQ9Y6G1 99 aa15.72■□□□□ 0.11
SSH3-209ENST00000532600 IGHV3OR15-7A0A075B7D8 119 aa15.71■□□□□ 0.11
SSH3-209ENST00000532600 MDFIC2A0A1B0GVS7 189 aa15.71■□□□□ 0.11
SSH3-209ENST00000532600 A0A1B0GW55 424 aa15.71■□□□□ 0.11
SSH3-209ENST00000532600 OOEPA6NGQ2 149 aa15.71■□□□□ 0.11
SSH3-209ENST00000532600 ZNF670-ZNF695F2Z2N8 137 aa15.71■□□□□ 0.11
SSH3-209ENST00000532600 GYPAP02724 150 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms