RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 CTSZQ9UBR2 303 aa14.33□□□□□ -0.12
PHRF1-204ENST00000532550 COPS3Q9UNS2 423 aa14.33□□□□□ -0.12
PHRF1-204ENST00000532550 IGHV3OR16-10A0A075B7F0 116 aa14.32□□□□□ -0.12
PHRF1-204ENST00000532550 TMEM210A6NLX4 147 aa14.32□□□□□ -0.12
PHRF1-204ENST00000532550 M0R129 80 aa14.32□□□□□ -0.12
PHRF1-204ENST00000532550 TMPRSS2O15393 492 aa14.32□□□□□ -0.12
PHRF1-204ENST00000532550 IGHV4-38-2P0DP08 117 aa14.32□□□□□ -0.12
PHRF1-204ENST00000532550 EGR1P18146 543 aa14.32□□□□□ -0.12
PHRF1-204ENST00000532550 CFHR2P36980 270 aa14.32□□□□□ -0.12
PHRF1-204ENST00000532550 CXCR4P61073 352 aa14.32□□□□□ -0.12
PHRF1-204ENST00000532550 ZNF322Q6U7Q0 402 aaPredicted RBP14.32□□□□□ -0.12
PHRF1-204ENST00000532550 CCDC121Q6ZUS5 278 aa14.32□□□□□ -0.12
PHRF1-204ENST00000532550 THAP5Q7Z6K1 395 aa14.32□□□□□ -0.12
PHRF1-204ENST00000532550 GID4Q8IVV7 300 aa14.32□□□□□ -0.12
PHRF1-204ENST00000532550 SLC35F2Q8IXU6 374 aa14.32□□□□□ -0.12
PHRF1-204ENST00000532550 ZDHHC23Q8IYP9 409 aa14.32□□□□□ -0.12
PHRF1-204ENST00000532550 ZDHHC22Q8N966 263 aa14.32□□□□□ -0.12
PHRF1-204ENST00000532550 PNLDC1Q8NA58 520 aaKnown RBP14.32□□□□□ -0.12
PHRF1-204ENST00000532550 TTTY10Q9BZA0 68 aa14.32□□□□□ -0.12
PHRF1-204ENST00000532550 TLNRD1Q9H1K6 362 aa14.32□□□□□ -0.12
PHRF1-204ENST00000532550 KAAG1Q9UBP8 84 aa14.32□□□□□ -0.12
PHRF1-204ENST00000532550 OAZ3Q9UMX2 235 aa14.32□□□□□ -0.12
PHRF1-204ENST00000532550 ZNF816-ZNF321PA0A0X1KG74 233 aa14.31□□□□□ -0.12
PHRF1-204ENST00000532550 C22orf46C9J442 243 aa14.31□□□□□ -0.12
PHRF1-204ENST00000532550 ZNF670-ZNF695F2Z2N8 137 aa14.31□□□□□ -0.12
PHRF1-204ENST00000532550 DVL1O14640 695 aa14.31□□□□□ -0.12
PHRF1-204ENST00000532550 ECDO95905 644 aaPredicted RBP14.31□□□□□ -0.12
PHRF1-204ENST00000532550 ATP6V1B1P15313 513 aa14.31□□□□□ -0.12
PHRF1-204ENST00000532550 MTNR1AP48039 350 aa14.31□□□□□ -0.12
PHRF1-204ENST00000532550 FGF12P61328 243 aa14.31□□□□□ -0.12
PHRF1-204ENST00000532550 RIPPLY1Q0D2K3 151 aa14.31□□□□□ -0.12
PHRF1-204ENST00000532550 BAMBIQ13145 260 aa14.31□□□□□ -0.12
PHRF1-204ENST00000532550 FAM76BQ5HYJ3 339 aa14.31□□□□□ -0.12
PHRF1-204ENST00000532550 ASRGL1Q7L266 308 aa14.31□□□□□ -0.12
PHRF1-204ENST00000532550 DOK3Q7L591 496 aa14.31□□□□□ -0.12
PHRF1-204ENST00000532550 SLC36A1Q7Z2H8 476 aa14.31□□□□□ -0.12
PHRF1-204ENST00000532550 SCCPDHQ8NBX0 429 aa14.31□□□□□ -0.12
PHRF1-204ENST00000532550 OR10Z1Q8NGY1 313 aa14.31□□□□□ -0.12
PHRF1-204ENST00000532550 OR51E1Q8TCB6 317 aa14.31□□□□□ -0.12
PHRF1-204ENST00000532550 RPL3LQ92901 407 aaKnown RBP14.31□□□□□ -0.12
PHRF1-204ENST00000532550 APOL4Q9BPW4 351 aa14.31□□□□□ -0.12
PHRF1-204ENST00000532550 RBM4BQ9BQ04 359 aaKnown RBP14.31□□□□□ -0.12
PHRF1-204ENST00000532550 OSBPL10Q9BXB5 764 aa14.31□□□□□ -0.12
PHRF1-204ENST00000532550 RIBC2Q9H4K1 309 aa14.31□□□□□ -0.12
PHRF1-204ENST00000532550 ADGRL4Q9HBW9 690 aa14.31□□□□□ -0.12
PHRF1-204ENST00000532550 ESM1Q9NQ30 184 aa14.31□□□□□ -0.12
PHRF1-204ENST00000532550 GPR84Q9NQS5 396 aa14.31□□□□□ -0.12
PHRF1-204ENST00000532550 CLN6Q9NWW5 311 aa14.31□□□□□ -0.12
PHRF1-204ENST00000532550 HAO2Q9NYQ3 351 aa14.31□□□□□ -0.12
PHRF1-204ENST00000532550 GTF2A1LQ9UNN4 478 aa14.31□□□□□ -0.12
PHRF1-204ENST00000532550 TMEM89A2RUT3 159 aa14.3□□□□□ -0.12
PHRF1-204ENST00000532550 SAC3D1A6NKF1 404 aa14.3□□□□□ -0.12
PHRF1-204ENST00000532550 PRR32B1ATL7 298 aa14.3□□□□□ -0.12
PHRF1-204ENST00000532550 ZNF879B4DU55 563 aa14.3□□□□□ -0.12
PHRF1-204ENST00000532550 MTRF1O75570 445 aaKnown RBP14.3□□□□□ -0.12
PHRF1-204ENST00000532550 POLR2IP36954 125 aaKnown RBP14.3□□□□□ -0.12
PHRF1-204ENST00000532550 GMFBP60983 142 aa14.3□□□□□ -0.12
PHRF1-204ENST00000532550 UBA52P62987 128 aaKnown RBP14.3□□□□□ -0.12
PHRF1-204ENST00000532550 C11orf91Q3C1V1 193 aa14.3□□□□□ -0.12
PHRF1-204ENST00000532550 BTN2A1Q7KYR7 527 aa14.3□□□□□ -0.12
PHRF1-204ENST00000532550 OR51G2Q8NGK0 314 aa14.3□□□□□ -0.12
PHRF1-204ENST00000532550 PYDC1Q8WXC3 89 aa14.3□□□□□ -0.12
PHRF1-204ENST00000532550 PPP1R14AQ96A00 147 aa14.3□□□□□ -0.12
PHRF1-204ENST00000532550 C12orf43Q96C57 262 aaKnown RBP14.3□□□□□ -0.12
PHRF1-204ENST00000532550 FAM71F1Q96KD3 344 aaPredicted RBP14.3□□□□□ -0.12
PHRF1-204ENST00000532550 CCL13Q99616 98 aa14.3□□□□□ -0.12
PHRF1-204ENST00000532550 PCGF1Q9BSM1 259 aa14.3□□□□□ -0.12
PHRF1-204ENST00000532550 SMURF1Q9HCE7 757 aa14.3□□□□□ -0.12
PHRF1-204ENST00000532550 DNAJB11Q9UBS4 358 aa14.3□□□□□ -0.12
PHRF1-204ENST00000532550 WARS2Q9UGM6 360 aaKnown RBP14.3□□□□□ -0.12
PHRF1-204ENST00000532550 NUFIP1Q9UHK0 495 aaKnown RBP14.3□□□□□ -0.12
PHRF1-204ENST00000532550 TRAV40A0A0B4J280 105 aa14.29□□□□□ -0.12
PHRF1-204ENST00000532550 SRRM5B3KS81 715 aa14.29□□□□□ -0.12
PHRF1-204ENST00000532550 ZNF732B4DXR9 585 aa14.29□□□□□ -0.12
PHRF1-204ENST00000532550 LOC110117498-PIK3R3F6TDL0 507 aa14.29□□□□□ -0.12
PHRF1-204ENST00000532550 MAGEB4O15481 346 aaPredicted RBP14.29□□□□□ -0.12
PHRF1-204ENST00000532550 TOX4O94842 621 aa14.29□□□□□ -0.12
PHRF1-204ENST00000532550 PLATP00750 562 aa14.29□□□□□ -0.12
PHRF1-204ENST00000532550 PRTN3P24158 256 aa14.29□□□□□ -0.12
PHRF1-204ENST00000532550 ATP6V1E1P36543 226 aa14.29□□□□□ -0.12
PHRF1-204ENST00000532550 GPM6AP51674 278 aa14.29□□□□□ -0.12
PHRF1-204ENST00000532550 BPIFB3P59826 476 aa14.29□□□□□ -0.12
PHRF1-204ENST00000532550 EGR3Q06889 387 aa14.29□□□□□ -0.12
PHRF1-204ENST00000532550 TUSC1Q2TAM9 212 aa14.29□□□□□ -0.12
PHRF1-204ENST00000532550 CEACAM21Q3KPI0 293 aa14.29□□□□□ -0.12
PHRF1-204ENST00000532550 WDR38Q5JTN6 314 aa14.29□□□□□ -0.12
PHRF1-204ENST00000532550 GPR157Q5UAW9 335 aa14.29□□□□□ -0.12
PHRF1-204ENST00000532550 C9orf139Q6ZV77 190 aa14.29□□□□□ -0.12
PHRF1-204ENST00000532550 MOB3CQ70IA8 216 aa14.29□□□□□ -0.12
PHRF1-204ENST00000532550 KRT74Q7RTS7 529 aa14.29□□□□□ -0.12
PHRF1-204ENST00000532550 OR5T2Q8NGG2 359 aa14.29□□□□□ -0.12
PHRF1-204ENST00000532550 OR8J1Q8NGP2 316 aa14.29□□□□□ -0.12
PHRF1-204ENST00000532550 ST8SIA4Q92187 359 aa14.29□□□□□ -0.12
PHRF1-204ENST00000532550 SEH1LQ96EE3 360 aa14.29□□□□□ -0.12
PHRF1-204ENST00000532550 PIGLQ9Y2B2 252 aa14.29□□□□□ -0.12
PHRF1-204ENST00000532550 FBN3Q75N90 2809 aa14.28□□□□□ -0.12
PHRF1-204ENST00000532550 P2RY10O00398 339 aa14.28□□□□□ -0.12
PHRF1-204ENST00000532550 AKR7A2O43488 359 aa14.28□□□□□ -0.12
PHRF1-204ENST00000532550 NDUFB3O43676 98 aa14.28□□□□□ -0.12
PHRF1-204ENST00000532550 COMPP49747 757 aaPredicted RBP14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms