RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 ZNF485Q8NCK3 441 aa10.94□□□□□ -0.66
SMPD1-202ENST00000526280 OR14K1Q8NGZ2 314 aa10.94□□□□□ -0.66
SMPD1-202ENST00000526280 OR52N1Q8NH53 320 aa10.94□□□□□ -0.66
SMPD1-202ENST00000526280 MYDGFQ969H8 173 aa10.94□□□□□ -0.66
SMPD1-202ENST00000526280 MUL1Q969V5 352 aa10.94□□□□□ -0.66
SMPD1-202ENST00000526280 PIMREGQ9BSJ6 248 aa10.94□□□□□ -0.66
SMPD1-202ENST00000526280 ADAT1Q9BUB4 502 aaKnown RBP10.94□□□□□ -0.66
SMPD1-202ENST00000526280 TMUB1Q9BVT8 246 aa10.94□□□□□ -0.66
SMPD1-202ENST00000526280 PAPOLGQ9BWT3 736 aaKnown RBP10.94□□□□□ -0.66
SMPD1-202ENST00000526280 REG4Q9BYZ8 158 aa10.94□□□□□ -0.66
SMPD1-202ENST00000526280 PPP1R3EQ9H7J1 279 aa10.94□□□□□ -0.66
SMPD1-202ENST00000526280 ZNF275Q9NSD4 429 aaPredicted RBP10.94□□□□□ -0.66
SMPD1-202ENST00000526280 PAK1IP1Q9NWT1 392 aaPredicted RBP10.94□□□□□ -0.66
SMPD1-202ENST00000526280 MPC1Q9Y5U8 109 aa10.94□□□□□ -0.66
SMPD1-202ENST00000526280 CACNG2Q9Y698 323 aa10.94□□□□□ -0.66
SMPD1-202ENST00000526280 V9GYS6 101 aa10.94□□□□□ -0.66
SMPD1-202ENST00000526280 ACANP16112 2415 aa10.94□□□□□ -0.66
SMPD1-202ENST00000526280 DYSFO75923 2080 aa10.93□□□□□ -0.66
SMPD1-202ENST00000526280 ZNF816-ZNF321PA0A0X1KG74 233 aa10.93□□□□□ -0.66
SMPD1-202ENST00000526280 LOC100289279A0A1B0GTE1 492 aa10.93□□□□□ -0.66
SMPD1-202ENST00000526280 A0A1B0GVI7 797 aa10.93□□□□□ -0.66
SMPD1-202ENST00000526280 DHRS7CA6NNS2 312 aa10.93□□□□□ -0.66
SMPD1-202ENST00000526280 RNF223E7ERA6 249 aa10.93□□□□□ -0.66
SMPD1-202ENST00000526280 SYT7O43581 403 aa10.93□□□□□ -0.66
SMPD1-202ENST00000526280 NOL3O60936 208 aaKnown RBP10.93□□□□□ -0.66
SMPD1-202ENST00000526280 PTBP3O95758 552 aaKnown RBP10.93□□□□□ -0.66
SMPD1-202ENST00000526280 SLC25A16P16260 332 aa10.93□□□□□ -0.66
SMPD1-202ENST00000526280 GNALP38405 381 aa10.93□□□□□ -0.66
SMPD1-202ENST00000526280 NR4A2P43354 598 aa10.93□□□□□ -0.66
SMPD1-202ENST00000526280 GATA4P43694 442 aa10.93□□□□□ -0.66
SMPD1-202ENST00000526280 TMBIM6P55061 237 aa10.93□□□□□ -0.66
SMPD1-202ENST00000526280 PRDX4Q13162 271 aa10.93□□□□□ -0.66
SMPD1-202ENST00000526280 CCDC58Q4VC31 144 aa10.93□□□□□ -0.66
SMPD1-202ENST00000526280 TMEM244Q5VVB8 128 aa10.93□□□□□ -0.66
SMPD1-202ENST00000526280 RNLSQ5VYX0 342 aa10.93□□□□□ -0.66
SMPD1-202ENST00000526280 CIARTQ8N365 385 aaPredicted RBP10.93□□□□□ -0.66
SMPD1-202ENST00000526280 CCDC54Q8NEL0 328 aa10.93□□□□□ -0.66
SMPD1-202ENST00000526280 GATAD2BQ8WXI9 593 aa10.93□□□□□ -0.66
SMPD1-202ENST00000526280 PIGCQ92535 297 aa10.93□□□□□ -0.66
SMPD1-202ENST00000526280 CCL17Q92583 94 aa10.93□□□□□ -0.66
SMPD1-202ENST00000526280 DVL3Q92997 716 aaPredicted RBP10.93□□□□□ -0.66
SMPD1-202ENST00000526280 CDCA4Q9BXL8 241 aa10.93□□□□□ -0.66
SMPD1-202ENST00000526280 CCDC90BQ9GZT6 254 aa10.93□□□□□ -0.66
SMPD1-202ENST00000526280 GCM1Q9NP62 436 aa10.93□□□□□ -0.66
SMPD1-202ENST00000526280 BABAM2Q9NXR7 383 aa10.93□□□□□ -0.66
SMPD1-202ENST00000526280 TREM2Q9NZC2 230 aa10.93□□□□□ -0.66
SMPD1-202ENST00000526280 PIGLQ9Y2B2 252 aa10.93□□□□□ -0.66
SMPD1-202ENST00000526280 A0A096LNT2 108 aa10.92□□□□□ -0.66
SMPD1-202ENST00000526280 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.92□□□□□ -0.66
SMPD1-202ENST00000526280 IGHV3-64DA0A0J9YX35 117 aa10.92□□□□□ -0.66
SMPD1-202ENST00000526280 LOC107986453A0A1B0GWG9 222 aa10.92□□□□□ -0.66
SMPD1-202ENST00000526280 ZNF850A8MQ14 1090 aa10.92□□□□□ -0.66
SMPD1-202ENST00000526280 H3BMQ9 156 aa10.92□□□□□ -0.66
SMPD1-202ENST00000526280 H7C1Q1 480 aa10.92□□□□□ -0.66
SMPD1-202ENST00000526280 FAHP16930 419 aa10.92□□□□□ -0.66
SMPD1-202ENST00000526280 ZNF12P17014 697 aa10.92□□□□□ -0.66
SMPD1-202ENST00000526280 PCMT1P22061 227 aa10.92□□□□□ -0.66
SMPD1-202ENST00000526280 MZT1Q08AG7 82 aa10.92□□□□□ -0.66
SMPD1-202ENST00000526280 TMEM42Q69YG0 159 aa10.92□□□□□ -0.66
SMPD1-202ENST00000526280 RPL22L1Q6P5R6 122 aaKnown RBP10.92□□□□□ -0.66
SMPD1-202ENST00000526280 SVOPQ8N4V2 548 aa10.92□□□□□ -0.66
SMPD1-202ENST00000526280 NANOGP1Q8N7R0 232 aa10.92□□□□□ -0.66
SMPD1-202ENST00000526280 OR8S1Q8NH09 359 aa10.92□□□□□ -0.66
SMPD1-202ENST00000526280 OR5P3Q8WZ94 311 aa10.92□□□□□ -0.66
SMPD1-202ENST00000526280 ERGIC1Q969X5 290 aa10.92□□□□□ -0.66
SMPD1-202ENST00000526280 ITPKCQ96DU7 683 aa10.92□□□□□ -0.66
SMPD1-202ENST00000526280 BPESC1Q9GZL8 116 aa10.92□□□□□ -0.66
SMPD1-202ENST00000526280 NAA50Q9GZZ1 169 aaKnown RBP10.92□□□□□ -0.66
SMPD1-202ENST00000526280 ABCB9Q9NP78 766 aa10.92□□□□□ -0.66
SMPD1-202ENST00000526280 TMEM106BQ9NUM4 274 aa10.92□□□□□ -0.66
SMPD1-202ENST00000526280 C14orf119Q9NWQ9 140 aa10.92□□□□□ -0.66
SMPD1-202ENST00000526280 ENPP5Q9UJA9 477 aa10.92□□□□□ -0.66
SMPD1-202ENST00000526280 PPP1R3CQ9UQK1 317 aa10.92□□□□□ -0.66
SMPD1-202ENST00000526280 TANC2Q9HCD6 1990 aa10.91□□□□□ -0.66
SMPD1-202ENST00000526280 TRBV2A0A0J9YWF9 115 aa10.91□□□□□ -0.66
SMPD1-202ENST00000526280 TMEM212A6NML5 194 aa10.91□□□□□ -0.66
SMPD1-202ENST00000526280 ANXA2P2A6NMY6 339 aa10.91□□□□□ -0.66
SMPD1-202ENST00000526280 H3BSH0 61 aa10.91□□□□□ -0.66
SMPD1-202ENST00000526280 IFNL4K9M1U5 179 aa10.91□□□□□ -0.66
SMPD1-202ENST00000526280 OGG1O15527 345 aa10.91□□□□□ -0.66
SMPD1-202ENST00000526280 PPIHO43447 177 aaKnown RBP10.91□□□□□ -0.66
SMPD1-202ENST00000526280 RGS10O43665 173 aa10.91□□□□□ -0.66
SMPD1-202ENST00000526280 ZFPL1O95159 310 aa10.91□□□□□ -0.66
SMPD1-202ENST00000526280 LALBAP00709 142 aa10.91□□□□□ -0.66
SMPD1-202ENST00000526280 CD99P14209 185 aa10.91□□□□□ -0.66
SMPD1-202ENST00000526280 PMELP40967 661 aa10.91□□□□□ -0.66
SMPD1-202ENST00000526280 GPR6P46095 362 aaPredicted RBP10.91□□□□□ -0.66
SMPD1-202ENST00000526280 SLC3A1Q07837 685 aa10.91□□□□□ -0.66
SMPD1-202ENST00000526280 HNRNPA0Q13151 305 aaKnown RBP10.91□□□□□ -0.66
SMPD1-202ENST00000526280 MPPED2Q15777 294 aa10.91□□□□□ -0.66
SMPD1-202ENST00000526280 PRAMEF6Q5VXH4 476 aa10.91□□□□□ -0.66
SMPD1-202ENST00000526280 MOGAT3Q86VF5 341 aa10.91□□□□□ -0.66
SMPD1-202ENST00000526280 ZNF676Q8N7Q3 588 aa10.91□□□□□ -0.66
SMPD1-202ENST00000526280 OR5AK2Q8NH90 309 aa10.91□□□□□ -0.66
SMPD1-202ENST00000526280 RPS4Y2Q8TD47 263 aa10.91□□□□□ -0.66
SMPD1-202ENST00000526280 C10orf35Q96D05 121 aa10.91□□□□□ -0.66
SMPD1-202ENST00000526280 COX4I2Q96KJ9 171 aa10.91□□□□□ -0.66
SMPD1-202ENST00000526280 MICU1Q9BPX6 476 aa10.91□□□□□ -0.66
SMPD1-202ENST00000526280 DCAF16Q9NXF7 216 aa10.91□□□□□ -0.66
SMPD1-202ENST00000526280 HHLA2Q9UM44 414 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms