RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 SLC51BQ86UW2 128 aa3.16□□□□□ -1.9
SKP1-209ENST00000522552 OR6V1Q8N148 313 aa3.16□□□□□ -1.9
SKP1-209ENST00000522552 GPD1LQ8N335 351 aa3.16□□□□□ -1.9
SKP1-209ENST00000522552 NPWQ8N729 165 aa3.16□□□□□ -1.9
SKP1-209ENST00000522552 CHST4Q8NCG5 386 aa3.16□□□□□ -1.9
SKP1-209ENST00000522552 OR4C13Q8NGP0 309 aa3.16□□□□□ -1.9
SKP1-209ENST00000522552 OR11L1Q8NGX0 322 aa3.16□□□□□ -1.9
SKP1-209ENST00000522552 OR10X1Q8NGY0 326 aa3.16□□□□□ -1.9
SKP1-209ENST00000522552 OR13G1Q8NGZ3 307 aa3.16□□□□□ -1.9
SKP1-209ENST00000522552 NT5CQ8TCD5 201 aa3.16□□□□□ -1.9
SKP1-209ENST00000522552 FAM19A4Q96LR4 140 aa3.16□□□□□ -1.9
SKP1-209ENST00000522552 TMEM109Q9BVC6 243 aa3.16□□□□□ -1.9
SKP1-209ENST00000522552 OCR1Q9BZK8 76 aa3.16□□□□□ -1.9
SKP1-209ENST00000522552 DDX31Q9H8H2 851 aaKnown RBP3.16□□□□□ -1.9
SKP1-209ENST00000522552 RHOFQ9HBH0 211 aa3.16□□□□□ -1.9
SKP1-209ENST00000522552 C12orf4Q9NQ89 552 aa3.16□□□□□ -1.9
SKP1-209ENST00000522552 XPNPEP1Q9NQW7 623 aa3.16□□□□□ -1.9
SKP1-209ENST00000522552 IMPAD1Q9NX62 359 aa3.16□□□□□ -1.9
SKP1-209ENST00000522552 SHPKQ9UHJ6 478 aa3.16□□□□□ -1.9
SKP1-209ENST00000522552 CD84Q9UIB8 345 aa3.16□□□□□ -1.9
SKP1-209ENST00000522552 VAX2Q9UIW0 290 aa3.16□□□□□ -1.9
SKP1-209ENST00000522552 ANXA10Q9UJ72 324 aa3.16□□□□□ -1.9
SKP1-209ENST00000522552 RAB26Q9ULW5 256 aa3.16□□□□□ -1.9
SKP1-209ENST00000522552 IGHV1OR15-1A0A075B7D0 117 aa3.15□□□□□ -1.9
SKP1-209ENST00000522552 IGHV4-30-2A0A087WSY4 118 aa3.15□□□□□ -1.9
SKP1-209ENST00000522552 TRAV8-4A0A0B4J246 113 aa3.15□□□□□ -1.9
SKP1-209ENST00000522552 SMIM9A6NGZ8 99 aa3.15□□□□□ -1.9
SKP1-209ENST00000522552 SYCE1LA8MT33 242 aa3.15□□□□□ -1.9
SKP1-209ENST00000522552 AGPAT2O15120 278 aa3.15□□□□□ -1.9
SKP1-209ENST00000522552 SLC25A27O95847 323 aa3.15□□□□□ -1.9
SKP1-209ENST00000522552 IGKV1D-16P01601 117 aa3.15□□□□□ -1.9
SKP1-209ENST00000522552 P01737 135 aa3.15□□□□□ -1.9
SKP1-209ENST00000522552 SLPIP03973 132 aa3.15□□□□□ -1.9
SKP1-209ENST00000522552 OR5H8P0DN80 308 aa3.15□□□□□ -1.9
SKP1-209ENST00000522552 RAB4BP61018 213 aa3.15□□□□□ -1.9
SKP1-209ENST00000522552 AQP6Q13520 282 aa3.15□□□□□ -1.9
SKP1-209ENST00000522552 KLF9Q13886 244 aaPredicted RBP3.15□□□□□ -1.9
SKP1-209ENST00000522552 FHL2Q14192 279 aa3.15□□□□□ -1.9
SKP1-209ENST00000522552 OR1Q1Q15612 314 aa3.15□□□□□ -1.9
SKP1-209ENST00000522552 ANKRD22Q5VYY1 191 aa3.15□□□□□ -1.9
SKP1-209ENST00000522552 FAM53AQ6NSI3 398 aaPredicted RBP3.15□□□□□ -1.9
SKP1-209ENST00000522552 PCSK4Q6UW60 755 aa3.15□□□□□ -1.9
SKP1-209ENST00000522552 CXCL17Q6UXB2 119 aa3.15□□□□□ -1.9
SKP1-209ENST00000522552 MYPOPQ86VE0 399 aaPredicted RBP3.15□□□□□ -1.9
SKP1-209ENST00000522552 LGI3Q8N145 548 aa3.15□□□□□ -1.9
SKP1-209ENST00000522552 SLC22A18ASQ8N1D0 253 aa3.15□□□□□ -1.9
SKP1-209ENST00000522552 STK40Q8N2I9 435 aa3.15□□□□□ -1.9
SKP1-209ENST00000522552 AQP11Q8NBQ7 271 aa3.15□□□□□ -1.9
SKP1-209ENST00000522552 GPR32P1Q8NGA4 272 aa3.15□□□□□ -1.9
SKP1-209ENST00000522552 OR6K3Q8NGY3 331 aa3.15□□□□□ -1.9
SKP1-209ENST00000522552 OR9G1Q8NH87 305 aa3.15□□□□□ -1.9
SKP1-209ENST00000522552 ZFP90Q8TF47 636 aa3.15□□□□□ -1.9
SKP1-209ENST00000522552 C16orf78Q8WTQ4 265 aa3.15□□□□□ -1.9
SKP1-209ENST00000522552 RXFP2Q8WXD0 754 aa3.15□□□□□ -1.9
SKP1-209ENST00000522552 NEUROG1Q92886 237 aa3.15□□□□□ -1.9
SKP1-209ENST00000522552 ZNF524Q96C55 264 aa3.15□□□□□ -1.9
SKP1-209ENST00000522552 SH3GL3Q99963 347 aa3.15□□□□□ -1.9
SKP1-209ENST00000522552 DHRS9Q9BPW9 319 aa3.15□□□□□ -1.9
SKP1-209ENST00000522552 MOKQ9UQ07 419 aa3.15□□□□□ -1.9
SKP1-209ENST00000522552 PSG11Q9UQ72 335 aa3.15□□□□□ -1.9
SKP1-209ENST00000522552 SIGLEC9Q9Y336 463 aa3.15□□□□□ -1.9
SKP1-209ENST00000522552 SNX10Q9Y5X0 201 aa3.15□□□□□ -1.9
SKP1-209ENST00000522552 CENPVL3A0A0U1RRI6 287 aa3.14□□□□□ -1.91
SKP1-209ENST00000522552 RPL37AP8A6NKH3 93 aa3.14□□□□□ -1.91
SKP1-209ENST00000522552 KMOO15229 486 aa3.14□□□□□ -1.91
SKP1-209ENST00000522552 C6orf47O95873 294 aa3.14□□□□□ -1.91
SKP1-209ENST00000522552 HPNP05981 417 aa3.14□□□□□ -1.91
SKP1-209ENST00000522552 SLC35G6P0C7Q6 338 aa3.14□□□□□ -1.91
SKP1-209ENST00000522552 RCC1P18754 421 aaPredicted RBP3.14□□□□□ -1.91
SKP1-209ENST00000522552 M6PRP20645 277 aa3.14□□□□□ -1.91
SKP1-209ENST00000522552 TSPOP30536 169 aa3.14□□□□□ -1.91
SKP1-209ENST00000522552 PYCR1P32322 319 aa3.14□□□□□ -1.91
SKP1-209ENST00000522552 RPS9P46781 194 aaKnown RBP3.14□□□□□ -1.91
SKP1-209ENST00000522552 SPCS3P61009 180 aa3.14□□□□□ -1.91
SKP1-209ENST00000522552 CACNG7P62955 275 aa3.14□□□□□ -1.91
SKP1-209ENST00000522552 ARG2P78540 354 aa3.14□□□□□ -1.91
SKP1-209ENST00000522552 RPL19P84098 196 aaKnown RBP3.14□□□□□ -1.91
SKP1-209ENST00000522552 COL10A1Q03692 680 aa3.14□□□□□ -1.91
SKP1-209ENST00000522552 BAXQ07812 192 aa3.14□□□□□ -1.91
SKP1-209ENST00000522552 PPP1R1AQ13522 171 aa3.14□□□□□ -1.91
SKP1-209ENST00000522552 SHHQ15465 462 aa3.14□□□□□ -1.91
SKP1-209ENST00000522552 MAPK14Q16539 360 aa3.14□□□□□ -1.91
SKP1-209ENST00000522552 SRSF7Q16629 238 aaKnown RBP eCLIP3.14□□□□□ -1.91
SKP1-209ENST00000522552 LRRC75BQ2VPJ9 315 aa3.14□□□□□ -1.91
SKP1-209ENST00000522552 CEACAM16Q2WEN9 425 aa3.14□□□□□ -1.91
SKP1-209ENST00000522552 CHRFAM7AQ494W8 412 aa3.14□□□□□ -1.91
SKP1-209ENST00000522552 ZCWPW2Q504Y3 356 aa3.14□□□□□ -1.91
SKP1-209ENST00000522552 C1orf100Q5SVJ3 147 aa3.14□□□□□ -1.91
SKP1-209ENST00000522552 C9orf57Q5W0N0 161 aa3.14□□□□□ -1.91
SKP1-209ENST00000522552 SPSB3Q6PJ21 355 aa3.14□□□□□ -1.91
SKP1-209ENST00000522552 DHRS4L2Q6PKH6 230 aa3.14□□□□□ -1.91
SKP1-209ENST00000522552 XKRXQ6PP77 449 aa3.14□□□□□ -1.91
SKP1-209ENST00000522552 WDR74Q6RFH5 385 aaPredicted RBP3.14□□□□□ -1.91
SKP1-209ENST00000522552 UNQ9370/PRO34162Q6UXP9 181 aa3.14□□□□□ -1.91
SKP1-209ENST00000522552 DNM1P46Q6ZS02 220 aa3.14□□□□□ -1.91
SKP1-209ENST00000522552 FAM231DQ6ZW35 169 aa3.14□□□□□ -1.91
SKP1-209ENST00000522552 PEX26Q7Z412 305 aa3.14□□□□□ -1.91
SKP1-209ENST00000522552 TMED4Q7Z7H5 227 aa3.14□□□□□ -1.91
SKP1-209ENST00000522552 NIT1Q86X76 327 aa3.14□□□□□ -1.91
SKP1-209ENST00000522552 GATD1Q8NB37 220 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms