RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 CD80P33681 288 aa7.81□□□□□ -1.16
HDAC3-215ENST00000519474 CX3CR1P49238 355 aa7.81□□□□□ -1.16
HDAC3-215ENST00000519474 RASSF2P50749 326 aa7.81□□□□□ -1.16
HDAC3-215ENST00000519474 ZNF121P58317 390 aaPredicted RBP7.81□□□□□ -1.16
HDAC3-215ENST00000519474 ZNF154Q13106 437 aa7.81□□□□□ -1.16
HDAC3-215ENST00000519474 SNAPC1Q16533 368 aa7.81□□□□□ -1.16
HDAC3-215ENST00000519474 TUSC1Q2TAM9 212 aa7.81□□□□□ -1.16
HDAC3-215ENST00000519474 ZNF404Q494X3 552 aa7.81□□□□□ -1.16
HDAC3-215ENST00000519474 SLC35D3Q5M8T2 416 aa7.81□□□□□ -1.16
HDAC3-215ENST00000519474 RAB12Q6IQ22 244 aa7.81□□□□□ -1.16
HDAC3-215ENST00000519474 ZNF841Q6ZN19 808 aa7.81□□□□□ -1.16
HDAC3-215ENST00000519474 ZNF826PQ6ZT77 177 aa7.81□□□□□ -1.16
HDAC3-215ENST00000519474 FAM57BQ71RH2 274 aa7.81□□□□□ -1.16
HDAC3-215ENST00000519474 SLC16A9Q7RTY1 509 aa7.81□□□□□ -1.16
HDAC3-215ENST00000519474 C19orf18Q8NEA5 215 aa7.81□□□□□ -1.16
HDAC3-215ENST00000519474 OR56B2PQ8NGI1 322 aa7.81□□□□□ -1.16
HDAC3-215ENST00000519474 DVL3Q92997 716 aaPredicted RBP7.81□□□□□ -1.16
HDAC3-215ENST00000519474 TMEM68Q96MH6 324 aa7.81□□□□□ -1.16
HDAC3-215ENST00000519474 BRD7Q9NPI1 651 aa7.81□□□□□ -1.16
HDAC3-215ENST00000519474 MRPL15Q9P015 296 aaKnown RBP7.81□□□□□ -1.16
HDAC3-215ENST00000519474 RNF7Q9UBF6 113 aa7.81□□□□□ -1.16
HDAC3-215ENST00000519474 KLHDC2Q9Y2U9 406 aa7.81□□□□□ -1.16
HDAC3-215ENST00000519474 AP4S1Q9Y587 144 aa7.81□□□□□ -1.16
HDAC3-215ENST00000519474 SVEP1Q4LDE5 3571 aa7.81□□□□□ -1.16
HDAC3-215ENST00000519474 WNK2Q9Y3S1 2297 aa7.81□□□□□ -1.16
HDAC3-215ENST00000519474 CCDC182A6NF36 153 aa7.8□□□□□ -1.16
HDAC3-215ENST00000519474 LRRC30A6NM36 301 aa7.8□□□□□ -1.16
HDAC3-215ENST00000519474 SLC22A1O15245 554 aa7.8□□□□□ -1.16
HDAC3-215ENST00000519474 PRODHO43272 600 aa7.8□□□□□ -1.16
HDAC3-215ENST00000519474 TBX1O43435 398 aa7.8□□□□□ -1.16
HDAC3-215ENST00000519474 PRKYO43930 277 aa7.8□□□□□ -1.16
HDAC3-215ENST00000519474 APOC1P02654 83 aa7.8□□□□□ -1.16
HDAC3-215ENST00000519474 ANXA2P07355 339 aaKnown RBP7.8□□□□□ -1.16
HDAC3-215ENST00000519474 GRPP07492 148 aa7.8□□□□□ -1.16
HDAC3-215ENST00000519474 LYNP07948 512 aa7.8□□□□□ -1.16
HDAC3-215ENST00000519474 H2BFMP0C1H6 154 aa7.8□□□□□ -1.16
HDAC3-215ENST00000519474 EPHA1P21709 976 aa7.8□□□□□ -1.16
HDAC3-215ENST00000519474 HSD11B1P28845 292 aa7.8□□□□□ -1.16
HDAC3-215ENST00000519474 GSK3AP49840 483 aa7.8□□□□□ -1.16
HDAC3-215ENST00000519474 APOFQ13790 326 aa7.8□□□□□ -1.16
HDAC3-215ENST00000519474 ATP6AP1Q15904 470 aa7.8□□□□□ -1.16
HDAC3-215ENST00000519474 AANATQ16613 207 aa7.8□□□□□ -1.16
HDAC3-215ENST00000519474 KLF17Q5JT82 389 aaPredicted RBP7.8□□□□□ -1.16
HDAC3-215ENST00000519474 KDM4DQ6B0I6 523 aa7.8□□□□□ -1.16
HDAC3-215ENST00000519474 SFRP4Q6FHJ7 346 aaPredicted RBP7.8□□□□□ -1.16
HDAC3-215ENST00000519474 BCDIN3DQ7Z5W3 292 aaKnown RBP7.8□□□□□ -1.16
HDAC3-215ENST00000519474 KLBQ86Z14 1044 aa7.8□□□□□ -1.16
HDAC3-215ENST00000519474 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.8□□□□□ -1.16
HDAC3-215ENST00000519474 C1orf87Q8N0U7 546 aa7.8□□□□□ -1.16
HDAC3-215ENST00000519474 MUC20Q8N307 709 aaPredicted RBP7.8□□□□□ -1.16
HDAC3-215ENST00000519474 TEX29Q8N6K0 151 aa7.8□□□□□ -1.16
HDAC3-215ENST00000519474 ZNF454Q8N9F8 522 aa7.8□□□□□ -1.16
HDAC3-215ENST00000519474 OR11L1Q8NGX0 322 aa7.8□□□□□ -1.16
HDAC3-215ENST00000519474 RAB40AQ8WXH6 277 aa7.8□□□□□ -1.16
HDAC3-215ENST00000519474 DNAJC9Q8WXX5 260 aa7.8□□□□□ -1.16
HDAC3-215ENST00000519474 LRTOMTQ8WZ04 291 aa7.8□□□□□ -1.16
HDAC3-215ENST00000519474 PPP1R14AQ96A00 147 aa7.8□□□□□ -1.16
HDAC3-215ENST00000519474 DACT3Q96B18 629 aaPredicted RBP7.8□□□□□ -1.16
HDAC3-215ENST00000519474 NEIL1Q96FI4 390 aaPredicted RBP7.8□□□□□ -1.16
HDAC3-215ENST00000519474 REEP6Q96HR9 211 aa7.8□□□□□ -1.16
HDAC3-215ENST00000519474 LYZL4Q96KX0 146 aa7.8□□□□□ -1.16
HDAC3-215ENST00000519474 SP140LQ9H930 580 aa7.8□□□□□ -1.16
HDAC3-215ENST00000519474 DNAJC27Q9NZQ0 273 aa7.8□□□□□ -1.16
HDAC3-215ENST00000519474 NOP16Q9Y3C1 178 aaKnown RBP7.8□□□□□ -1.16
HDAC3-215ENST00000519474 RHBDD3Q9Y3P4 386 aa7.8□□□□□ -1.16
HDAC3-215ENST00000519474 AUP1Q9Y679 476 aa7.8□□□□□ -1.16
HDAC3-215ENST00000519474 KIR2DS1A0A191URI9 304 aa7.79□□□□□ -1.16
HDAC3-215ENST00000519474 hCG_38984A0A1B0GV85 526 aa7.79□□□□□ -1.16
HDAC3-215ENST00000519474 HSBP1L1C9JCN9 74 aa7.79□□□□□ -1.16
HDAC3-215ENST00000519474 G3V2T6 193 aa7.79□□□□□ -1.16
HDAC3-215ENST00000519474 RGS9O75916 674 aaPredicted RBP7.79□□□□□ -1.16
HDAC3-215ENST00000519474 IRF2P14316 349 aa7.79□□□□□ -1.16
HDAC3-215ENST00000519474 FASP25445 335 aa7.79□□□□□ -1.16
HDAC3-215ENST00000519474 POLR2IP36954 125 aaKnown RBP7.79□□□□□ -1.16
HDAC3-215ENST00000519474 PSMB10P40306 273 aa7.79□□□□□ -1.16
HDAC3-215ENST00000519474 NAA10P41227 235 aaPredicted RBP7.79□□□□□ -1.16
HDAC3-215ENST00000519474 POU3F4P49335 361 aa7.79□□□□□ -1.16
HDAC3-215ENST00000519474 ALDH3A2P51648 485 aa7.79□□□□□ -1.16
HDAC3-215ENST00000519474 ESRRGP62508 458 aa7.79□□□□□ -1.16
HDAC3-215ENST00000519474 POU4F2Q12837 409 aa7.79□□□□□ -1.16
HDAC3-215ENST00000519474 CCDC58Q4VC31 144 aa7.79□□□□□ -1.16
HDAC3-215ENST00000519474 ESCO2Q56NI9 601 aa7.79□□□□□ -1.16
HDAC3-215ENST00000519474 WDR25Q64LD2 544 aaPredicted RBP7.79□□□□□ -1.16
HDAC3-215ENST00000519474 LRRN1Q6UXK5 716 aa7.79□□□□□ -1.16
HDAC3-215ENST00000519474 USP43Q70EL4 1123 aa7.79□□□□□ -1.16
HDAC3-215ENST00000519474 WDR86Q86TI4 376 aa7.79□□□□□ -1.16
HDAC3-215ENST00000519474 BCL6BQ8N143 479 aaPredicted RBP7.79□□□□□ -1.16
HDAC3-215ENST00000519474 PARP8Q8N3A8 854 aa7.79□□□□□ -1.16
HDAC3-215ENST00000519474 GCSAMQ8N6F7 178 aa7.79□□□□□ -1.16
HDAC3-215ENST00000519474 SEMA6DQ8NFY4 1073 aa7.79□□□□□ -1.16
HDAC3-215ENST00000519474 OR52H1Q8NGJ2 320 aa7.79□□□□□ -1.16
HDAC3-215ENST00000519474 ZNF418Q8TF45 676 aaPredicted RBP7.79□□□□□ -1.16
HDAC3-215ENST00000519474 PGAM5Q96HS1 289 aa7.79□□□□□ -1.16
HDAC3-215ENST00000519474 PLEKHA8Q96JA3 519 aa7.79□□□□□ -1.16
HDAC3-215ENST00000519474 BCL7BQ9BQE9 202 aa7.79□□□□□ -1.16
HDAC3-215ENST00000519474 SSBP3Q9BWW4 388 aaPredicted RBP7.79□□□□□ -1.16
HDAC3-215ENST00000519474 OR10A2Q9H208 303 aa7.79□□□□□ -1.16
HDAC3-215ENST00000519474 OPA3Q9H6K4 179 aa7.79□□□□□ -1.16
HDAC3-215ENST00000519474 FN3KRPQ9HA64 309 aa7.79□□□□□ -1.16
HDAC3-215ENST00000519474 C1orf123Q9NWV4 160 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms