RNA–Protein interactions for RNA: ENST00000518931.1

SQLE-203, Transcript of squalene epoxidase, humanhuman

TSL 4

Gene SQLE, Length 554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-203ENST00000518931 SP4Q02446 784 aa4.86□□□□□ -1.63
SQLE-203ENST00000518931 SRSF9Q13242 221 aaKnown RBP eCLIP4.86□□□□□ -1.63
SQLE-203ENST00000518931 SLC39A6Q13433 755 aa4.86□□□□□ -1.63
SQLE-203ENST00000518931 TRIP13Q15645 432 aaPredicted RBP4.86□□□□□ -1.63
SQLE-203ENST00000518931 ATP6AP1Q15904 470 aa4.86□□□□□ -1.63
SQLE-203ENST00000518931 PYCR3Q53H96 274 aa4.86□□□□□ -1.63
SQLE-203ENST00000518931 CT45A1Q5HYN5 189 aa4.86□□□□□ -1.63
SQLE-203ENST00000518931 WDR25Q64LD2 544 aaPredicted RBP4.86□□□□□ -1.63
SQLE-203ENST00000518931 RPL13AP3Q6NVV1 102 aa4.86□□□□□ -1.63
SQLE-203ENST00000518931 ZNF774Q6NX45 483 aa4.86□□□□□ -1.63
SQLE-203ENST00000518931 DUX4L9Q6RFH8 374 aaPredicted RBP4.86□□□□□ -1.63
SQLE-203ENST00000518931 STAC2Q6ZMT1 411 aa4.86□□□□□ -1.63
SQLE-203ENST00000518931 FAM19A5Q7Z5A7 132 aaPredicted RBP4.86□□□□□ -1.63
SQLE-203ENST00000518931 FAM19A1Q7Z5A9 133 aa4.86□□□□□ -1.63
SQLE-203ENST00000518931 TRPT1Q86TN4 253 aaKnown RBP4.86□□□□□ -1.63
SQLE-203ENST00000518931 BLIDQ8IZY5 108 aa4.86□□□□□ -1.63
SQLE-203ENST00000518931 BPIFB2Q8N4F0 458 aa4.86□□□□□ -1.63
SQLE-203ENST00000518931 OR8G5Q8NG78 346 aa4.86□□□□□ -1.63
SQLE-203ENST00000518931 CT45A3Q8NHU0 189 aa4.86□□□□□ -1.63
SQLE-203ENST00000518931 SPATA3Q8NHX4 192 aa4.86□□□□□ -1.63
SQLE-203ENST00000518931 CRYGNQ8WXF5 182 aa4.86□□□□□ -1.63
SQLE-203ENST00000518931 RCN3Q96D15 328 aa4.86□□□□□ -1.63
SQLE-203ENST00000518931 MRPL48Q96GC5 212 aaKnown RBP4.86□□□□□ -1.63
SQLE-203ENST00000518931 BTF3L4Q96K17 158 aa4.86□□□□□ -1.63
SQLE-203ENST00000518931 ZNF488Q96MN9 340 aa4.86□□□□□ -1.63
SQLE-203ENST00000518931 TMEM56Q96MV1 263 aa4.86□□□□□ -1.63
SQLE-203ENST00000518931 ZNF285Q96NJ3 590 aa4.86□□□□□ -1.63
SQLE-203ENST00000518931 SCGB3A2Q96PL1 93 aa4.86□□□□□ -1.63
SQLE-203ENST00000518931 OR8B4Q96RC9 309 aa4.86□□□□□ -1.63
SQLE-203ENST00000518931 DOK1Q99704 481 aa4.86□□□□□ -1.63
SQLE-203ENST00000518931 HES7Q9BYE0 225 aa4.86□□□□□ -1.63
SQLE-203ENST00000518931 Q9H521 79 aa4.86□□□□□ -1.63
SQLE-203ENST00000518931 ZNF385DQ9H6B1 395 aa4.86□□□□□ -1.63
SQLE-203ENST00000518931 FNDC4Q9H6D8 234 aaPredicted RBP4.86□□□□□ -1.63
SQLE-203ENST00000518931 Q9HAA7 133 aa4.86□□□□□ -1.63
SQLE-203ENST00000518931 BIN3Q9NQY0 253 aa4.86□□□□□ -1.63
SQLE-203ENST00000518931 WRAP73Q9P2S5 460 aaPredicted RBP4.86□□□□□ -1.63
SQLE-203ENST00000518931 VPS29Q9UBQ0 182 aa4.86□□□□□ -1.63
SQLE-203ENST00000518931 DUX4Q9UBX2 424 aa4.86□□□□□ -1.63
SQLE-203ENST00000518931 HSPB11Q9Y547 144 aa4.86□□□□□ -1.63
SQLE-203ENST00000518931 ARHGEF10O15013 1369 aa4.86□□□□□ -1.63
SQLE-203ENST00000518931 UHRF1BP1Q6BDS2 1440 aa4.86□□□□□ -1.63
SQLE-203ENST00000518931 FANCAO15360 1455 aa4.86□□□□□ -1.63
SQLE-203ENST00000518931 MYOM2P54296 1465 aa4.86□□□□□ -1.63
SQLE-203ENST00000518931 LOC101059948A0A1B0GTJ6 334 aa4.85□□□□□ -1.63
SQLE-203ENST00000518931 OR5H15A6NDH6 313 aa4.85□□□□□ -1.63
SQLE-203ENST00000518931 OR6C6A6NF89 314 aa4.85□□□□□ -1.63
SQLE-203ENST00000518931 CLDN24A6NM45 220 aa4.85□□□□□ -1.63
SQLE-203ENST00000518931 LEUTXA8MZ59 168 aa4.85□□□□□ -1.63
SQLE-203ENST00000518931 PPP5D1E7EU14 171 aa4.85□□□□□ -1.63
SQLE-203ENST00000518931 H3BSA7 217 aa4.85□□□□□ -1.63
SQLE-203ENST00000518931 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.85□□□□□ -1.63
SQLE-203ENST00000518931 ERI3O43414 337 aaKnown RBP4.85□□□□□ -1.63
SQLE-203ENST00000518931 PRKYO43930 277 aa4.85□□□□□ -1.63
SQLE-203ENST00000518931 FKBP6O75344 327 aa4.85□□□□□ -1.63
SQLE-203ENST00000518931 SLC22A5O76082 557 aa4.85□□□□□ -1.63
SQLE-203ENST00000518931 LYPD3O95274 346 aa4.85□□□□□ -1.63
SQLE-203ENST00000518931 TSHBP01222 138 aa4.85□□□□□ -1.63
SQLE-203ENST00000518931 CFC1BP0CG36 223 aa4.85□□□□□ -1.63
SQLE-203ENST00000518931 CFC1P0CG37 223 aa4.85□□□□□ -1.63
SQLE-203ENST00000518931 SMIM6P0DI80 62 aa4.85□□□□□ -1.63
SQLE-203ENST00000518931 C1GALT1C1LP0DN25 315 aa4.85□□□□□ -1.63
SQLE-203ENST00000518931 ZNF17P17021 662 aa4.85□□□□□ -1.63
SQLE-203ENST00000518931 CALML3P27482 149 aa4.85□□□□□ -1.63
SQLE-203ENST00000518931 PMELP40967 661 aa4.85□□□□□ -1.63
SQLE-203ENST00000518931 TSFMP43897 325 aaKnown RBP4.85□□□□□ -1.63
SQLE-203ENST00000518931 ZFP36L2P47974 494 aaKnown RBP4.85□□□□□ -1.63
SQLE-203ENST00000518931 TCL1AP56279 114 aa4.85□□□□□ -1.63
SQLE-203ENST00000518931 B3GALT5-AS1P59052 145 aa4.85□□□□□ -1.63
SQLE-203ENST00000518931 BCL2L1Q07817 233 aa4.85□□□□□ -1.63
SQLE-203ENST00000518931 OR2F1Q13607 317 aa4.85□□□□□ -1.63
SQLE-203ENST00000518931 EDDM3AQ14507 147 aa4.85□□□□□ -1.63
SQLE-203ENST00000518931 ZNF846Q147U1 533 aa4.85□□□□□ -1.63
SQLE-203ENST00000518931 SLC25A35Q3KQZ1 300 aa4.85□□□□□ -1.63
SQLE-203ENST00000518931 ARHGAP11BQ3KRB8 267 aa4.85□□□□□ -1.63
SQLE-203ENST00000518931 ZBED5Q49AG3 693 aa4.85□□□□□ -1.63
SQLE-203ENST00000518931 TMEM97Q5BJF2 176 aa4.85□□□□□ -1.63
SQLE-203ENST00000518931 CARD16Q5EG05 197 aa4.85□□□□□ -1.63
SQLE-203ENST00000518931 UBE2UQ5VVX9 321 aa4.85□□□□□ -1.63
SQLE-203ENST00000518931 IZUMO2Q6UXV1 221 aa4.85□□□□□ -1.63
SQLE-203ENST00000518931 OLIG3Q7RTU3 272 aa4.85□□□□□ -1.63
SQLE-203ENST00000518931 TMEM135Q86UB9 458 aa4.85□□□□□ -1.63
SQLE-203ENST00000518931 C10orf107Q8IVU9 208 aa4.85□□□□□ -1.63
SQLE-203ENST00000518931 LRRC25Q8N386 305 aaPredicted RBP4.85□□□□□ -1.63
SQLE-203ENST00000518931 OR2T12Q8NG77 320 aa4.85□□□□□ -1.63
SQLE-203ENST00000518931 OR2G2Q8NGZ5 317 aa4.85□□□□□ -1.63
SQLE-203ENST00000518931 OR8U1Q8NH10 309 aa4.85□□□□□ -1.63
SQLE-203ENST00000518931 ZNF420Q8TAQ5 688 aaPredicted RBP4.85□□□□□ -1.63
SQLE-203ENST00000518931 RNF138Q8WVD3 245 aa4.85□□□□□ -1.63
SQLE-203ENST00000518931 EEF1AKMT1Q8WVE0 214 aa4.85□□□□□ -1.63
SQLE-203ENST00000518931 C11orf40Q8WZ69 217 aa4.85□□□□□ -1.63
SQLE-203ENST00000518931 ZNF501Q96CX3 271 aaPredicted RBP4.85□□□□□ -1.63
SQLE-203ENST00000518931 PAGE5Q96GU1 130 aa4.85□□□□□ -1.63
SQLE-203ENST00000518931 SEC22AQ96IW7 307 aa4.85□□□□□ -1.63
SQLE-203ENST00000518931 FOPNLQ96NB1 174 aa4.85□□□□□ -1.63
SQLE-203ENST00000518931 ZNF599Q96NL3 588 aa4.85□□□□□ -1.63
SQLE-203ENST00000518931 OXGR1Q96P68 337 aa4.85□□□□□ -1.63
SQLE-203ENST00000518931 DUX3Q96PT4 197 aa4.85□□□□□ -1.63
SQLE-203ENST00000518931 PFDN5Q99471 154 aa4.85□□□□□ -1.63
SQLE-203ENST00000518931 SORT1Q99523 831 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms