RNA–Protein interactions for RNA: ENST00000517625.5

SKP1-203, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 3 BASIC

Gene SKP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-203ENST00000517625 A0A0B4J2E0 115 aa1.55□□□□□ -2.16
SKP1-203ENST00000517625 CENPXA8MT69 81 aa1.55□□□□□ -2.16
SKP1-203ENST00000517625 LINC01619G3V211 115 aa1.55□□□□□ -2.16
SKP1-203ENST00000517625 H3BN98 237 aa1.55□□□□□ -2.16
SKP1-203ENST00000517625 TEX46H3BTG2 121 aa1.55□□□□□ -2.16
SKP1-203ENST00000517625 ZNF701M0R085 212 aaPredicted RBP1.55□□□□□ -2.16
SKP1-203ENST00000517625 M0R1X1 148 aa1.55□□□□□ -2.16
SKP1-203ENST00000517625 CATP04040 527 aaKnown RBP1.55□□□□□ -2.16
SKP1-203ENST00000517625 MMP7P09237 267 aaPredicted RBP1.55□□□□□ -2.16
SKP1-203ENST00000517625 THRAP10827 490 aa1.55□□□□□ -2.16
SKP1-203ENST00000517625 TCP1P17987 556 aaKnown RBP1.55□□□□□ -2.16
SKP1-203ENST00000517625 MSR1P21757 451 aa1.55□□□□□ -2.16
SKP1-203ENST00000517625 TAS2R43P59537 309 aa1.55□□□□□ -2.16
SKP1-203ENST00000517625 RPL18AQ02543 176 aaKnown RBP1.55□□□□□ -2.16
SKP1-203ENST00000517625 C2orf54Q08AI8 447 aa1.55□□□□□ -2.16
SKP1-203ENST00000517625 C6orf99Q4VX62 202 aa1.55□□□□□ -2.16
SKP1-203ENST00000517625 FAM104BQ5XKR9 115 aa1.55□□□□□ -2.16
SKP1-203ENST00000517625 LINC00336Q6ZUF6 198 aa1.55□□□□□ -2.16
SKP1-203ENST00000517625 DAW1Q8N136 415 aa1.55□□□□□ -2.16
SKP1-203ENST00000517625 ORMDL3Q8N138 153 aa1.55□□□□□ -2.16
SKP1-203ENST00000517625 ZNF645Q8N7E2 425 aa1.55□□□□□ -2.16
SKP1-203ENST00000517625 LINC00469Q8N7U9 141 aa1.55□□□□□ -2.16
SKP1-203ENST00000517625 TMEM104Q8NE00 496 aa1.55□□□□□ -2.16
SKP1-203ENST00000517625 OR4M2Q8NGB6 313 aa1.55□□□□□ -2.16
SKP1-203ENST00000517625 CPNE4Q96A23 557 aaPredicted RBP1.55□□□□□ -2.16
SKP1-203ENST00000517625 WDR34Q96EX3 536 aa1.55□□□□□ -2.16
SKP1-203ENST00000517625 RHOXF2Q9BQY4 288 aa1.55□□□□□ -2.16
SKP1-203ENST00000517625 BLZF1Q9H2G9 400 aa1.55□□□□□ -2.16
SKP1-203ENST00000517625 CHRAC1Q9NRG0 131 aa1.55□□□□□ -2.16
SKP1-203ENST00000517625 CES1P1Q9UKY3 287 aa1.55□□□□□ -2.16
SKP1-203ENST00000517625 UBIAD1Q9Y5Z9 338 aa1.55□□□□□ -2.16
SKP1-203ENST00000517625 PCM1Q15154 2024 aa1.55□□□□□ -2.16
SKP1-203ENST00000517625 GOLGA6L7A0A1B0GV03 622 aa1.54□□□□□ -2.16
SKP1-203ENST00000517625 A0A1W2PRF3 423 aa1.54□□□□□ -2.16
SKP1-203ENST00000517625 A0A1W2PRM7 423 aa1.54□□□□□ -2.16
SKP1-203ENST00000517625 ISPDA4D126 451 aa1.54□□□□□ -2.16
SKP1-203ENST00000517625 NCF1BA6NI72 391 aaPredicted RBP1.54□□□□□ -2.16
SKP1-203ENST00000517625 OR6C70A6NIJ9 312 aa1.54□□□□□ -2.16
SKP1-203ENST00000517625 NCF1CA8MVU1 366 aaPredicted RBP1.54□□□□□ -2.16
SKP1-203ENST00000517625 HACD1B0YJ81 288 aa1.54□□□□□ -2.16
SKP1-203ENST00000517625 PRAMEF26H0Y7S4 382 aa1.54□□□□□ -2.16
SKP1-203ENST00000517625 SIVA1O15304 175 aa1.54□□□□□ -2.16
SKP1-203ENST00000517625 IGLV2-8P01709 118 aa1.54□□□□□ -2.16
SKP1-203ENST00000517625 KLK1P06870 262 aa1.54□□□□□ -2.16
SKP1-203ENST00000517625 SLC35G6P0C7Q6 338 aa1.54□□□□□ -2.16
SKP1-203ENST00000517625 PRKACAP17612 351 aa1.54□□□□□ -2.16
SKP1-203ENST00000517625 PRKACBP22694 351 aa1.54□□□□□ -2.16
SKP1-203ENST00000517625 ARL2P36404 184 aa1.54□□□□□ -2.16
SKP1-203ENST00000517625 GALR1P47211 349 aa1.54□□□□□ -2.16
SKP1-203ENST00000517625 GDI2P50395 445 aaKnown RBP1.54□□□□□ -2.16
SKP1-203ENST00000517625 PPP1CAP62136 330 aa1.54□□□□□ -2.16
SKP1-203ENST00000517625 MAPRE2Q15555 327 aa1.54□□□□□ -2.16
SKP1-203ENST00000517625 GABRA6Q16445 453 aa1.54□□□□□ -2.16
SKP1-203ENST00000517625 SP6Q3SY56 376 aa1.54□□□□□ -2.16
SKP1-203ENST00000517625 KLHL12Q53G59 568 aa1.54□□□□□ -2.16
SKP1-203ENST00000517625 TMEM236Q5W0B7 351 aa1.54□□□□□ -2.16
SKP1-203ENST00000517625 SLC35D2Q76EJ3 337 aa1.54□□□□□ -2.16
SKP1-203ENST00000517625 MRPL21Q7Z2W9 205 aaKnown RBP1.54□□□□□ -2.16
SKP1-203ENST00000517625 LINC00304Q8N9R0 145 aa1.54□□□□□ -2.16
SKP1-203ENST00000517625 C1orf64Q8NEQ6 169 aa1.54□□□□□ -2.16
SKP1-203ENST00000517625 AGR3Q8TD06 166 aa1.54□□□□□ -2.16
SKP1-203ENST00000517625 CA5BP1Q8WTZ4 195 aa1.54□□□□□ -2.16
SKP1-203ENST00000517625 PEX13Q92968 403 aa1.54□□□□□ -2.16
SKP1-203ENST00000517625 YIPF5Q969M3 257 aa1.54□□□□□ -2.16
SKP1-203ENST00000517625 ISOC2Q96AB3 205 aa1.54□□□□□ -2.16
SKP1-203ENST00000517625 CERS2Q96G23 380 aa1.54□□□□□ -2.16
SKP1-203ENST00000517625 ZFP3Q96NJ6 502 aa1.54□□□□□ -2.16
SKP1-203ENST00000517625 GPR82Q96P67 336 aa1.54□□□□□ -2.16
SKP1-203ENST00000517625 API5Q9BZZ5 524 aaKnown RBP1.54□□□□□ -2.16
SKP1-203ENST00000517625 OR51B5Q9H339 312 aa1.54□□□□□ -2.16
SKP1-203ENST00000517625 RGCCQ9H4X1 137 aa1.54□□□□□ -2.16
SKP1-203ENST00000517625 C8orf33Q9H7E9 229 aaPredicted RBP1.54□□□□□ -2.16
SKP1-203ENST00000517625 ADA2Q9NZK5 511 aa1.54□□□□□ -2.16
SKP1-203ENST00000517625 HMGXB4Q9UGU5 601 aa1.54□□□□□ -2.16
SKP1-203ENST00000517625 DDX19BQ9UMR2 479 aa1.54□□□□□ -2.16
SKP1-203ENST00000517625 WDR19Q8NEZ3 1342 aa1.54□□□□□ -2.16
SKP1-203ENST00000517625 PLEKHG2Q9H7P9 1386 aa1.54□□□□□ -2.16
SKP1-203ENST00000517625 NPHP4O75161 1426 aaPredicted RBP1.54□□□□□ -2.16
SKP1-203ENST00000517625 IGHV6-1A0A0B4J1U7 121 aa1.53□□□□□ -2.16
SKP1-203ENST00000517625 CCL15-CCL14A0A0B4J2E2 113 aa1.53□□□□□ -2.16
SKP1-203ENST00000517625 SBNO1A3KN83 1393 aa1.53□□□□□ -2.16
SKP1-203ENST00000517625 ZNF99A8MXY4 864 aaPredicted RBP1.53□□□□□ -2.16
SKP1-203ENST00000517625 C16orf90A8MZG2 172 aa1.53□□□□□ -2.16
SKP1-203ENST00000517625 MFNGO00587 321 aa1.53□□□□□ -2.16
SKP1-203ENST00000517625 IGLV7-43P04211 117 aa1.53□□□□□ -2.16
SKP1-203ENST00000517625 GABRR2P28476 465 aa1.53□□□□□ -2.16
SKP1-203ENST00000517625 CCT6AP40227 531 aaKnown RBP1.53□□□□□ -2.16
SKP1-203ENST00000517625 RPS11P62280 158 aaKnown RBP eCLIP1.53□□□□□ -2.16
SKP1-203ENST00000517625 INCA1Q0VD86 236 aa1.53□□□□□ -2.16
SKP1-203ENST00000517625 CCL15Q16663 113 aa1.53□□□□□ -2.16
SKP1-203ENST00000517625 LUZP6Q538Z0 58 aa1.53□□□□□ -2.16
SKP1-203ENST00000517625 MRPL2Q5T653 305 aaKnown RBP1.53□□□□□ -2.16
SKP1-203ENST00000517625 MROH7Q68CQ1 1323 aa1.53□□□□□ -2.16
SKP1-203ENST00000517625 TTC19Q6DKK2 380 aaPredicted RBP1.53□□□□□ -2.16
SKP1-203ENST00000517625 MORN3Q6PF18 240 aaPredicted RBP1.53□□□□□ -2.16
SKP1-203ENST00000517625 OR2W3Q7Z3T1 314 aa1.53□□□□□ -2.16
SKP1-203ENST00000517625 LINC00523Q86TU6 105 aa1.53□□□□□ -2.16
SKP1-203ENST00000517625 KIF2BQ8N4N8 673 aa1.53□□□□□ -2.16
SKP1-203ENST00000517625 TRAM1L1Q8N609 369 aa1.53□□□□□ -2.16
SKP1-203ENST00000517625 FAM184AQ8NB25 1140 aa1.53□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms