RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 FER1L5A0AVI2 2057 aa3.13□□□□□ -1.91
RNU4-60P-201ENST00000517239 IGHV3OR16-13A0A075B7E8 117 aa3.12□□□□□ -1.91
RNU4-60P-201ENST00000517239 TGIF2-C20orf24A0A0A6YYL0 155 aa3.12□□□□□ -1.91
RNU4-60P-201ENST00000517239 IGLV1-36A0A0B4J1U3 117 aa3.12□□□□□ -1.91
RNU4-60P-201ENST00000517239 A0A1B0GV72 72 aa3.12□□□□□ -1.91
RNU4-60P-201ENST00000517239 SMIM9A6NGZ8 99 aa3.12□□□□□ -1.91
RNU4-60P-201ENST00000517239 METTL15A6NJ78 407 aa3.12□□□□□ -1.91
RNU4-60P-201ENST00000517239 CEACAM18A8MTB9 384 aa3.12□□□□□ -1.91
RNU4-60P-201ENST00000517239 C2orf74A8MZ97 194 aa3.12□□□□□ -1.91
RNU4-60P-201ENST00000517239 H7C417 338 aa3.12□□□□□ -1.91
RNU4-60P-201ENST00000517239 NTN3O00634 580 aaPredicted RBP3.12□□□□□ -1.91
RNU4-60P-201ENST00000517239 XKRYO14609 159 aa3.12□□□□□ -1.91
RNU4-60P-201ENST00000517239 AGPAT2O15120 278 aa3.12□□□□□ -1.91
RNU4-60P-201ENST00000517239 KMOO15229 486 aa3.12□□□□□ -1.91
RNU4-60P-201ENST00000517239 STX10O60499 249 aa3.12□□□□□ -1.91
RNU4-60P-201ENST00000517239 ZG16O60844 167 aa3.12□□□□□ -1.91
RNU4-60P-201ENST00000517239 UPK1BO75841 260 aa3.12□□□□□ -1.91
RNU4-60P-201ENST00000517239 SOX14O95416 240 aa3.12□□□□□ -1.91
RNU4-60P-201ENST00000517239 IGKV1D-16P01601 117 aa3.12□□□□□ -1.91
RNU4-60P-201ENST00000517239 MT-ND4P03905 459 aa3.12□□□□□ -1.91
RNU4-60P-201ENST00000517239 IGLL1P15814 213 aa3.12□□□□□ -1.91
RNU4-60P-201ENST00000517239 CBR1P16152 277 aa3.12□□□□□ -1.91
RNU4-60P-201ENST00000517239 ZNF17P17021 662 aa3.12□□□□□ -1.91
RNU4-60P-201ENST00000517239 SSTR5P35346 364 aa3.12□□□□□ -1.91
RNU4-60P-201ENST00000517239 TIMP3P35625 211 aa3.12□□□□□ -1.91
RNU4-60P-201ENST00000517239 RPS9P46781 194 aaKnown RBP3.12□□□□□ -1.91
RNU4-60P-201ENST00000517239 VSX2P58304 361 aaPredicted RBP3.12□□□□□ -1.91
RNU4-60P-201ENST00000517239 DSCR9P59020 149 aa3.12□□□□□ -1.91
RNU4-60P-201ENST00000517239 SPCS3P61009 180 aa3.12□□□□□ -1.91
RNU4-60P-201ENST00000517239 DYNLL1P63167 89 aaKnown RBP3.12□□□□□ -1.91
RNU4-60P-201ENST00000517239 RPS21P63220 83 aaKnown RBP3.12□□□□□ -1.91
RNU4-60P-201ENST00000517239 FAM53BQ14153 422 aa3.12□□□□□ -1.91
RNU4-60P-201ENST00000517239 PTGES3Q15185 160 aaKnown RBP3.12□□□□□ -1.91
RNU4-60P-201ENST00000517239 FAM53AQ6NSI3 398 aaPredicted RBP3.12□□□□□ -1.91
RNU4-60P-201ENST00000517239 ZNF544Q6NX49 715 aa3.12□□□□□ -1.91
RNU4-60P-201ENST00000517239 C3orf33Q6P1S2 294 aa3.12□□□□□ -1.91
RNU4-60P-201ENST00000517239 XKRXQ6PP77 449 aa3.12□□□□□ -1.91
RNU4-60P-201ENST00000517239 RASSF6Q6ZTQ3 369 aa3.12□□□□□ -1.91
RNU4-60P-201ENST00000517239 PEX26Q7Z412 305 aa3.12□□□□□ -1.91
RNU4-60P-201ENST00000517239 SKA3Q8IX90 412 aa3.12□□□□□ -1.91
RNU4-60P-201ENST00000517239 NPWQ8N729 165 aa3.12□□□□□ -1.91
RNU4-60P-201ENST00000517239 OR10X1Q8NGY0 326 aa3.12□□□□□ -1.91
RNU4-60P-201ENST00000517239 OR2V1Q8NHB1 315 aa3.12□□□□□ -1.91
RNU4-60P-201ENST00000517239 CCDC26Q8TAB7 109 aa3.12□□□□□ -1.91
RNU4-60P-201ENST00000517239 STOML3Q8TAV4 291 aa3.12□□□□□ -1.91
RNU4-60P-201ENST00000517239 MRGPRDQ8TDS7 321 aa3.12□□□□□ -1.91
RNU4-60P-201ENST00000517239 C16orf78Q8WTQ4 265 aa3.12□□□□□ -1.91
RNU4-60P-201ENST00000517239 RASSF5Q8WWW0 418 aa3.12□□□□□ -1.91
RNU4-60P-201ENST00000517239 FAM3DQ96BQ1 224 aa3.12□□□□□ -1.91
RNU4-60P-201ENST00000517239 ZIM3Q96PE6 472 aa3.12□□□□□ -1.91
RNU4-60P-201ENST00000517239 NIPSNAP1Q9BPW8 284 aa3.12□□□□□ -1.91
RNU4-60P-201ENST00000517239 ZNF747Q9BV97 191 aa3.12□□□□□ -1.91
RNU4-60P-201ENST00000517239 PECRQ9BY49 303 aa3.12□□□□□ -1.91
RNU4-60P-201ENST00000517239 SLIRPQ9GZT3 109 aaKnown RBP3.12□□□□□ -1.91
RNU4-60P-201ENST00000517239 SLC22A4Q9H015 551 aa3.12□□□□□ -1.91
RNU4-60P-201ENST00000517239 PARLQ9H300 379 aa3.12□□□□□ -1.91
RNU4-60P-201ENST00000517239 XPNPEP1Q9NQW7 623 aa3.12□□□□□ -1.91
RNU4-60P-201ENST00000517239 VNN3Q9NY84 501 aa3.12□□□□□ -1.91
RNU4-60P-201ENST00000517239 XCL2Q9UBD3 114 aa3.12□□□□□ -1.91
RNU4-60P-201ENST00000517239 MTFP1Q9UDX5 166 aa3.12□□□□□ -1.91
RNU4-60P-201ENST00000517239 UGT2A1Q9Y4X1 527 aa3.12□□□□□ -1.91
RNU4-60P-201ENST00000517239 IGHV4-30-2A0A087WSY4 118 aa3.11□□□□□ -1.91
RNU4-60P-201ENST00000517239 CLDN24A6NM45 220 aa3.11□□□□□ -1.91
RNU4-60P-201ENST00000517239 LINC01619G3V211 115 aa3.11□□□□□ -1.91
RNU4-60P-201ENST00000517239 J3QT63 122 aa3.11□□□□□ -1.91
RNU4-60P-201ENST00000517239 TAAR5O14804 337 aa3.11□□□□□ -1.91
RNU4-60P-201ENST00000517239 FGF17O60258 216 aa3.11□□□□□ -1.91
RNU4-60P-201ENST00000517239 SNAP91O60641 907 aa3.11□□□□□ -1.91
RNU4-60P-201ENST00000517239 CA11O75493 328 aa3.11□□□□□ -1.91
RNU4-60P-201ENST00000517239 FOXH1O75593 365 aa3.11□□□□□ -1.91
RNU4-60P-201ENST00000517239 RP2O75695 350 aa3.11□□□□□ -1.91
RNU4-60P-201ENST00000517239 PPP1R3DO95685 299 aa3.11□□□□□ -1.91
RNU4-60P-201ENST00000517239 HPNP05981 417 aa3.11□□□□□ -1.91
RNU4-60P-201ENST00000517239 CD5P06127 495 aa3.11□□□□□ -1.91
RNU4-60P-201ENST00000517239 PSMB9P28065 219 aa3.11□□□□□ -1.91
RNU4-60P-201ENST00000517239 SULT1A1P50225 295 aa3.11□□□□□ -1.91
RNU4-60P-201ENST00000517239 SULT1A2P50226 295 aa3.11□□□□□ -1.91
RNU4-60P-201ENST00000517239 GTF2A1P52655 376 aaPredicted RBP3.11□□□□□ -1.91
RNU4-60P-201ENST00000517239 LINC01547P58512 204 aaPredicted RBP3.11□□□□□ -1.91
RNU4-60P-201ENST00000517239 ERVFC1-1P60608 527 aa3.11□□□□□ -1.91
RNU4-60P-201ENST00000517239 RPS23P62266 143 aaKnown RBP3.11□□□□□ -1.91
RNU4-60P-201ENST00000517239 TNFRSF9Q07011 255 aa3.11□□□□□ -1.91
RNU4-60P-201ENST00000517239 FHL1Q13642 323 aa3.11□□□□□ -1.91
RNU4-60P-201ENST00000517239 KLF9Q13886 244 aaPredicted RBP3.11□□□□□ -1.91
RNU4-60P-201ENST00000517239 FZD2Q14332 565 aa3.11□□□□□ -1.91
RNU4-60P-201ENST00000517239 OR1Q1Q15612 314 aa3.11□□□□□ -1.91
RNU4-60P-201ENST00000517239 IZUMO4Q1ZYL8 232 aa3.11□□□□□ -1.91
RNU4-60P-201ENST00000517239 CHRFAM7AQ494W8 412 aa3.11□□□□□ -1.91
RNU4-60P-201ENST00000517239 PAGE3Q5JUK9 113 aa3.11□□□□□ -1.91
RNU4-60P-201ENST00000517239 C1orf146Q5VVC0 180 aa3.11□□□□□ -1.91
RNU4-60P-201ENST00000517239 SPSB3Q6PJ21 355 aa3.11□□□□□ -1.91
RNU4-60P-201ENST00000517239 DHRS4L2Q6PKH6 230 aa3.11□□□□□ -1.91
RNU4-60P-201ENST00000517239 UNQ9370/PRO34162Q6UXP9 181 aa3.11□□□□□ -1.91
RNU4-60P-201ENST00000517239 LCNL1Q6ZST4 164 aa3.11□□□□□ -1.91
RNU4-60P-201ENST00000517239 FAM231DQ6ZW35 169 aa3.11□□□□□ -1.91
RNU4-60P-201ENST00000517239 MRGPRGQ86SM5 289 aa3.11□□□□□ -1.91
RNU4-60P-201ENST00000517239 CATSPER3Q86XQ3 398 aa3.11□□□□□ -1.91
RNU4-60P-201ENST00000517239 CLDN22Q8N7P3 220 aa3.11□□□□□ -1.91
RNU4-60P-201ENST00000517239 AQP11Q8NBQ7 271 aa3.11□□□□□ -1.91
RNU4-60P-201ENST00000517239 GPR32P1Q8NGA4 272 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms