RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 MOV10Q9HCE1 1003 aaKnown RBP12.97□□□□□ -0.33
VCAN-211ENST00000513984 FLVCR2Q9UPI3 526 aa12.97□□□□□ -0.33
VCAN-211ENST00000513984 A0A1B0GUH1 482 aa12.96□□□□□ -0.33
VCAN-211ENST00000513984 A0A1W2PP11 408 aa12.96□□□□□ -0.33
VCAN-211ENST00000513984 ARPC1BO15143 372 aaKnown RBP12.96□□□□□ -0.33
VCAN-211ENST00000513984 CRTAPO75718 401 aaPredicted RBP12.96□□□□□ -0.33
VCAN-211ENST00000513984 CYB5AP00167 134 aa12.96□□□□□ -0.33
VCAN-211ENST00000513984 CD74P04233 296 aa12.96□□□□□ -0.33
VCAN-211ENST00000513984 RCVRNP35243 200 aa12.96□□□□□ -0.33
VCAN-211ENST00000513984 RPS27AP62979 156 aaKnown RBP12.96□□□□□ -0.33
VCAN-211ENST00000513984 KCNJ8Q15842 424 aa12.96□□□□□ -0.33
VCAN-211ENST00000513984 SLC22A6Q4U2R8 563 aa12.96□□□□□ -0.33
VCAN-211ENST00000513984 CD276Q5ZPR3 534 aa12.96□□□□□ -0.33
VCAN-211ENST00000513984 TFAP2EQ6VUC0 442 aa12.96□□□□□ -0.33
VCAN-211ENST00000513984 ZNF782Q6ZMW2 699 aaPredicted RBP12.96□□□□□ -0.33
VCAN-211ENST00000513984 FJX1Q86VR8 437 aa12.96□□□□□ -0.33
VCAN-211ENST00000513984 FAM89BQ8N5H3 189 aa12.96□□□□□ -0.33
VCAN-211ENST00000513984 ZBTB8BQ8NAP8 495 aaPredicted RBP12.96□□□□□ -0.33
VCAN-211ENST00000513984 OR56B1Q8NGI3 324 aa12.96□□□□□ -0.33
VCAN-211ENST00000513984 POM121L2Q96KW2 1035 aa12.96□□□□□ -0.33
VCAN-211ENST00000513984 TAAR6Q96RI8 345 aa12.96□□□□□ -0.33
VCAN-211ENST00000513984 TRIB1Q96RU8 372 aa12.96□□□□□ -0.33
VCAN-211ENST00000513984 SELENOIQ9C0D9 397 aa12.96□□□□□ -0.33
VCAN-211ENST00000513984 MED28Q9H204 178 aa12.96□□□□□ -0.33
VCAN-211ENST00000513984 OR10A4Q9H209 315 aa12.96□□□□□ -0.33
VCAN-211ENST00000513984 TP63Q9H3D4 680 aaPredicted RBP12.96□□□□□ -0.33
VCAN-211ENST00000513984 BANF2Q9H503 90 aa12.96□□□□□ -0.33
VCAN-211ENST00000513984 ING3Q9NXR8 418 aa12.96□□□□□ -0.33
VCAN-211ENST00000513984 POU2F3Q9UKI9 436 aa12.96□□□□□ -0.33
VCAN-211ENST00000513984 AKAP13Q12802 2813 aa12.96□□□□□ -0.34
VCAN-211ENST00000513984 C5orf49A4QMS7 147 aa12.95□□□□□ -0.34
VCAN-211ENST00000513984 NRASP01111 189 aa12.95□□□□□ -0.34
VCAN-211ENST00000513984 GSTP1P09211 210 aaKnown RBP12.95□□□□□ -0.34
VCAN-211ENST00000513984 GNB3P16520 340 aa12.95□□□□□ -0.34
VCAN-211ENST00000513984 ST3GAL2Q16842 350 aa12.95□□□□□ -0.34
VCAN-211ENST00000513984 ZNF584Q8IVC4 421 aa12.95□□□□□ -0.34
VCAN-211ENST00000513984 NANOS1Q8WY41 292 aaKnown RBP12.95□□□□□ -0.34
VCAN-211ENST00000513984 APOBEC3DQ96AK3 386 aaPredicted RBP12.95□□□□□ -0.34
VCAN-211ENST00000513984 DMRTB1Q96MA1 342 aa12.95□□□□□ -0.34
VCAN-211ENST00000513984 TECTBQ96PL2 329 aa12.95□□□□□ -0.34
VCAN-211ENST00000513984 ING4Q9UNL4 249 aa12.95□□□□□ -0.34
VCAN-211ENST00000513984 FRYQ5TBA9 3013 aa12.95□□□□□ -0.34
VCAN-211ENST00000513984 ZNF816-ZNF321PA0A0X1KG74 233 aa12.95□□□□□ -0.34
VCAN-211ENST00000513984 SOCS1O15524 211 aa12.95□□□□□ -0.34
VCAN-211ENST00000513984 RAB3DO95716 219 aa12.95□□□□□ -0.34
VCAN-211ENST00000513984 HIST1H1DP16402 221 aaKnown RBP12.95□□□□□ -0.34
VCAN-211ENST00000513984 MGMTP16455 207 aa12.95□□□□□ -0.34
VCAN-211ENST00000513984 MTCP1P56278 107 aa12.95□□□□□ -0.34
VCAN-211ENST00000513984 PRSS12P56730 875 aa12.95□□□□□ -0.34
VCAN-211ENST00000513984 PLP2Q04941 152 aa12.95□□□□□ -0.34
VCAN-211ENST00000513984 CBX3Q13185 183 aa12.95□□□□□ -0.34
VCAN-211ENST00000513984 FCN2Q15485 313 aa12.95□□□□□ -0.34
VCAN-211ENST00000513984 HIKESHIQ53FT3 197 aa12.95□□□□□ -0.34
VCAN-211ENST00000513984 PLAC9Q5JTB6 97 aa12.95□□□□□ -0.34
VCAN-211ENST00000513984 METTL11BQ5VVY1 283 aa12.95□□□□□ -0.34
VCAN-211ENST00000513984 Q6ZS92 163 aa12.95□□□□□ -0.34
VCAN-211ENST00000513984 LHFPL2Q6ZUX7 228 aa12.95□□□□□ -0.34
VCAN-211ENST00000513984 FAM214BQ7L5A3 538 aa12.95□□□□□ -0.34
VCAN-211ENST00000513984 TRAPPC6BQ86SZ2 158 aa12.95□□□□□ -0.34
VCAN-211ENST00000513984 INTS1Q8N201 2190 aaKnown RBP12.95□□□□□ -0.34
VCAN-211ENST00000513984 STEAP2Q8NFT2 490 aa12.95□□□□□ -0.34
VCAN-211ENST00000513984 OR51S1Q8NGJ8 323 aa12.95□□□□□ -0.34
VCAN-211ENST00000513984 OR8S1Q8NH09 359 aa12.95□□□□□ -0.34
VCAN-211ENST00000513984 SNIP1Q8TAD8 396 aaKnown RBP12.95□□□□□ -0.34
VCAN-211ENST00000513984 DVL3Q92997 716 aaPredicted RBP12.95□□□□□ -0.34
VCAN-211ENST00000513984 RAB3CQ96E17 227 aa12.95□□□□□ -0.34
VCAN-211ENST00000513984 S100A13Q99584 98 aa12.95□□□□□ -0.34
VCAN-211ENST00000513984 REPIN1Q9BWE0 567 aaKnown RBP12.95□□□□□ -0.34
VCAN-211ENST00000513984 TM2D1Q9BX74 207 aa12.95□□□□□ -0.34
VCAN-211ENST00000513984 NPDC1Q9NQX5 325 aaPredicted RBP12.95□□□□□ -0.34
VCAN-211ENST00000513984 IGKV1-27A0A075B6S5 117 aa12.94□□□□□ -0.34
VCAN-211ENST00000513984 FOXI3A8MTJ6 420 aaPredicted RBP12.94□□□□□ -0.34
VCAN-211ENST00000513984 ZNF736B4DX44 427 aaPredicted RBP12.94□□□□□ -0.34
VCAN-211ENST00000513984 RBP2P50120 134 aa12.94□□□□□ -0.34
VCAN-211ENST00000513984 TMEM50BP56557 158 aa12.94□□□□□ -0.34
VCAN-211ENST00000513984 MAB21L1Q13394 359 aa12.94□□□□□ -0.34
VCAN-211ENST00000513984 NUDCD2Q8WVJ2 157 aa12.94□□□□□ -0.34
VCAN-211ENST00000513984 WNT2BQ93097 391 aa12.94□□□□□ -0.34
VCAN-211ENST00000513984 MED30Q96HR3 178 aa12.94□□□□□ -0.34
VCAN-211ENST00000513984 TRAF4Q9BUZ4 470 aaPredicted RBP12.94□□□□□ -0.34
VCAN-211ENST00000513984 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.94□□□□□ -0.34
VCAN-211ENST00000513984 KCNN3Q9UGI6 736 aa12.94□□□□□ -0.34
VCAN-211ENST00000513984 SSUH2Q9Y2M2 353 aa12.94□□□□□ -0.34
VCAN-211ENST00000513984 KCNK7Q9Y2U2 307 aa12.94□□□□□ -0.34
VCAN-211ENST00000513984 CFAP47Q6ZTR5 3102 aa12.94□□□□□ -0.34
VCAN-211ENST00000513984 CUL9Q8IWT3 2517 aa12.94□□□□□ -0.34
VCAN-211ENST00000513984 OR14I1A6ND48 311 aa12.93□□□□□ -0.34
VCAN-211ENST00000513984 MFNGO00587 321 aa12.93□□□□□ -0.34
VCAN-211ENST00000513984 SSX5O60225 188 aa12.93□□□□□ -0.34
VCAN-211ENST00000513984 CNOT4O95628 575 aaKnown RBP12.93□□□□□ -0.34
VCAN-211ENST00000513984 IL5P05113 134 aa12.93□□□□□ -0.34
VCAN-211ENST00000513984 SERPINA5P05154 406 aa12.93□□□□□ -0.34
VCAN-211ENST00000513984 FCER2P06734 321 aa12.93□□□□□ -0.34
VCAN-211ENST00000513984 CCL2P13500 99 aa12.93□□□□□ -0.34
VCAN-211ENST00000513984 SERPINA2P20848 420 aa12.93□□□□□ -0.34
VCAN-211ENST00000513984 CCNOP22674 350 aa12.93□□□□□ -0.34
VCAN-211ENST00000513984 EIF2S3P41091 472 aaKnown RBP12.93□□□□□ -0.34
VCAN-211ENST00000513984 GK2Q14410 553 aaPredicted RBP12.93□□□□□ -0.34
VCAN-211ENST00000513984 PNLIPRP3Q17RR3 467 aa12.93□□□□□ -0.34
VCAN-211ENST00000513984 ASCL4Q6XD76 172 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms