RNA–Protein interactions for RNA: ENST00000512844.5

CHD1-209, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 848 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-209ENST00000512844 HDHD3Q9BSH5 251 aaPredicted RBP3.32□□□□□ -1.88
CHD1-209ENST00000512844 RSG1Q9BU20 258 aa3.32□□□□□ -1.88
CHD1-209ENST00000512844 FAM107BQ9H098 131 aa3.32□□□□□ -1.88
CHD1-209ENST00000512844 ZSCAN16Q9H4T2 348 aaPredicted RBP3.32□□□□□ -1.88
CHD1-209ENST00000512844 SIRT7Q9NRC8 400 aa3.32□□□□□ -1.88
CHD1-209ENST00000512844 FGFR1OP2Q9NVK5 253 aa3.32□□□□□ -1.88
CHD1-209ENST00000512844 TAS2R9Q9NYW1 312 aa3.32□□□□□ -1.88
CHD1-209ENST00000512844 SIGLEC8Q9NYZ4 499 aa3.32□□□□□ -1.88
CHD1-209ENST00000512844 MSH6P52701 1360 aa3.32□□□□□ -1.88
CHD1-209ENST00000512844 NPATQ14207 1427 aa3.32□□□□□ -1.88
CHD1-209ENST00000512844 MLH3Q9UHC1 1453 aa3.32□□□□□ -1.88
CHD1-209ENST00000512844 ARHGEF28Q8N1W1 1705 aaKnown RBP3.32□□□□□ -1.88
CHD1-209ENST00000512844 KIF20BQ96Q89 1820 aa3.32□□□□□ -1.88
CHD1-209ENST00000512844 ARHGAP21Q5T5U3 1957 aa3.32□□□□□ -1.88
CHD1-209ENST00000512844 MROH2AA6NES4 1674 aa3.31□□□□□ -1.88
CHD1-209ENST00000512844 MROH1Q8NDA8 1641 aa3.31□□□□□ -1.88
CHD1-209ENST00000512844 ABCC3O15438 1527 aa3.31□□□□□ -1.88
CHD1-209ENST00000512844 YTHDC2Q9H6S0 1430 aaKnown RBP3.31□□□□□ -1.88
CHD1-209ENST00000512844 A0A1W2PRG6 482 aa3.31□□□□□ -1.88
CHD1-209ENST00000512844 TSPAN11A1L157 253 aa3.31□□□□□ -1.88
CHD1-209ENST00000512844 OR5B21A6NL26 309 aa3.31□□□□□ -1.88
CHD1-209ENST00000512844 LYRM9A8MSI8 78 aa3.31□□□□□ -1.88
CHD1-209ENST00000512844 HIDE1A8MVS5 230 aa3.31□□□□□ -1.88
CHD1-209ENST00000512844 IDSB3KWA1 339 aa3.31□□□□□ -1.88
CHD1-209ENST00000512844 PGRMC1O00264 195 aaKnown RBP3.31□□□□□ -1.88
CHD1-209ENST00000512844 CDC7O00311 574 aa3.31□□□□□ -1.88
CHD1-209ENST00000512844 LAD1O00515 517 aa3.31□□□□□ -1.88
CHD1-209ENST00000512844 PLPP1O14494 284 aa3.31□□□□□ -1.88
CHD1-209ENST00000512844 PLPP3O14495 311 aa3.31□□□□□ -1.88
CHD1-209ENST00000512844 MPDU1O75352 247 aa3.31□□□□□ -1.88
CHD1-209ENST00000512844 TNFSF13O75888 250 aa3.31□□□□□ -1.88
CHD1-209ENST00000512844 LSM8O95777 96 aaKnown RBP3.31□□□□□ -1.88
CHD1-209ENST00000512844 CT62P0C5K7 136 aa3.31□□□□□ -1.88
CHD1-209ENST00000512844 CHTF8P0CG12 524 aa3.31□□□□□ -1.88
CHD1-209ENST00000512844 PRPS1L1P21108 318 aa3.31□□□□□ -1.88
CHD1-209ENST00000512844 HLA-DMAP28067 261 aa3.31□□□□□ -1.88
CHD1-209ENST00000512844 MAGEA3P43357 314 aa3.31□□□□□ -1.88
CHD1-209ENST00000512844 MAGEA6P43360 314 aa3.31□□□□□ -1.88
CHD1-209ENST00000512844 LHX2P50458 406 aa3.31□□□□□ -1.88
CHD1-209ENST00000512844 RPL14P50914 215 aaKnown RBP3.31□□□□□ -1.88
CHD1-209ENST00000512844 GPM6AP51674 278 aa3.31□□□□□ -1.88
CHD1-209ENST00000512844 DLX1P56177 255 aa3.31□□□□□ -1.88
CHD1-209ENST00000512844 RAB4BP61018 213 aa3.31□□□□□ -1.88
CHD1-209ENST00000512844 PDIA2Q13087 525 aaKnown RBP3.31□□□□□ -1.88
CHD1-209ENST00000512844 PTGES3Q15185 160 aaKnown RBP3.31□□□□□ -1.88
CHD1-209ENST00000512844 PSG5Q15238 335 aa3.31□□□□□ -1.88
CHD1-209ENST00000512844 ATP6AP1Q15904 470 aa3.31□□□□□ -1.88
CHD1-209ENST00000512844 PSMD5Q16401 504 aa3.31□□□□□ -1.88
CHD1-209ENST00000512844 MOGQ16653 247 aa3.31□□□□□ -1.88
CHD1-209ENST00000512844 C5orf64Q2M2E5 130 aa3.31□□□□□ -1.88
CHD1-209ENST00000512844 RPEL1Q2QD12 228 aa3.31□□□□□ -1.88
CHD1-209ENST00000512844 SOHLH1Q5JUK2 328 aa3.31□□□□□ -1.88
CHD1-209ENST00000512844 DUPD1Q68J44 220 aa3.31□□□□□ -1.88
CHD1-209ENST00000512844 SLC25A48Q6ZT89 311 aaKnown RBP3.31□□□□□ -1.88
CHD1-209ENST00000512844 BOD1L2Q8IYS8 172 aa3.31□□□□□ -1.88
CHD1-209ENST00000512844 PGAM4Q8N0Y7 254 aa3.31□□□□□ -1.88
CHD1-209ENST00000512844 Q8N402 240 aa3.31□□□□□ -1.88
CHD1-209ENST00000512844 EID2Q8N6I1 236 aa3.31□□□□□ -1.88
CHD1-209ENST00000512844 CDRT4Q8N9R6 151 aa3.31□□□□□ -1.88
CHD1-209ENST00000512844 DUSP18Q8NEJ0 188 aa3.31□□□□□ -1.88
CHD1-209ENST00000512844 OR5B17Q8NGF7 314 aa3.31□□□□□ -1.88
CHD1-209ENST00000512844 OR5K2Q8NHB8 316 aa3.31□□□□□ -1.88
CHD1-209ENST00000512844 CXorf40AQ8TE69 158 aa3.31□□□□□ -1.88
CHD1-209ENST00000512844 PYROXD1Q8WU10 500 aa3.31□□□□□ -1.88
CHD1-209ENST00000512844 DNAJB3Q8WWF6 145 aa3.31□□□□□ -1.88
CHD1-209ENST00000512844 TFGQ92734 400 aaPredicted RBP3.31□□□□□ -1.88
CHD1-209ENST00000512844 ARPC1AQ92747 370 aa3.31□□□□□ -1.88
CHD1-209ENST00000512844 UFD1Q92890 307 aa3.31□□□□□ -1.88
CHD1-209ENST00000512844 TMA16Q96EY4 203 aaKnown RBP3.31□□□□□ -1.88
CHD1-209ENST00000512844 PAGE5Q96GU1 130 aa3.31□□□□□ -1.88
CHD1-209ENST00000512844 HSFY1Q96LI6 401 aa3.31□□□□□ -1.88
CHD1-209ENST00000512844 TBX15Q96SF7 602 aa3.31□□□□□ -1.88
CHD1-209ENST00000512844 RBKSQ9H477 322 aa3.31□□□□□ -1.88
CHD1-209ENST00000512844 DHX35Q9H5Z1 703 aaKnown RBP3.31□□□□□ -1.88
CHD1-209ENST00000512844 SIAEQ9HAT2 523 aa3.31□□□□□ -1.88
CHD1-209ENST00000512844 HRASLSQ9HDD0 168 aa3.31□□□□□ -1.88
CHD1-209ENST00000512844 PRSS16Q9NQE7 514 aa3.31□□□□□ -1.88
CHD1-209ENST00000512844 PLEKHJ1Q9NW61 149 aa3.31□□□□□ -1.88
CHD1-209ENST00000512844 RMND1Q9NWS8 449 aa3.31□□□□□ -1.88
CHD1-209ENST00000512844 RHBDL2Q9NX52 303 aa3.31□□□□□ -1.88
CHD1-209ENST00000512844 RPL36Q9Y3U8 105 aaKnown RBP3.31□□□□□ -1.88
CHD1-209ENST00000512844 LTBP1Q14766 1721 aa3.3□□□□□ -1.88
CHD1-209ENST00000512844 PIK3C2BO00750 1634 aa3.3□□□□□ -1.88
CHD1-209ENST00000512844 NEO1Q92859 1461 aa3.3□□□□□ -1.88
CHD1-209ENST00000512844 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.3□□□□□ -1.88
CHD1-209ENST00000512844 PRSS37A4D1T9 235 aa3.3□□□□□ -1.88
CHD1-209ENST00000512844 ANKRD63C9JTQ0 380 aa3.3□□□□□ -1.88
CHD1-209ENST00000512844 H0YJX3 145 aa3.3□□□□□ -1.88
CHD1-209ENST00000512844 H3BNH8 94 aa3.3□□□□□ -1.88
CHD1-209ENST00000512844 PPP1R2P9O14990 202 aa3.3□□□□□ -1.88
CHD1-209ENST00000512844 SGCEO43556 437 aa3.3□□□□□ -1.88
CHD1-209ENST00000512844 OR7A10O76100 309 aa3.3□□□□□ -1.88
CHD1-209ENST00000512844 TSPAN13O95857 204 aa3.3□□□□□ -1.88
CHD1-209ENST00000512844 IFNA5P01569 189 aa3.3□□□□□ -1.88
CHD1-209ENST00000512844 HBE1P02100 147 aa3.3□□□□□ -1.88
CHD1-209ENST00000512844 ZNF7P17097 686 aaPredicted RBP3.3□□□□□ -1.88
CHD1-209ENST00000512844 SLC2A5P22732 501 aa3.3□□□□□ -1.88
CHD1-209ENST00000512844 CMA1P23946 247 aa3.3□□□□□ -1.88
CHD1-209ENST00000512844 CEACAM3P40198 252 aa3.3□□□□□ -1.88
CHD1-209ENST00000512844 PRLHRP49683 370 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms