RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 RNF166Q96A37 237 aaPredicted RBP5.29□□□□□ -1.56
TRAPPC11-209ENST00000512476 EEF1AKMT3Q96AZ1 226 aa5.29□□□□□ -1.56
TRAPPC11-209ENST00000512476 DNAJA3Q96EY1 480 aa5.29□□□□□ -1.56
TRAPPC11-209ENST00000512476 C4orf45Q96LM5 186 aa5.29□□□□□ -1.56
TRAPPC11-209ENST00000512476 OR52B2Q96RD2 323 aa5.29□□□□□ -1.56
TRAPPC11-209ENST00000512476 POLD4Q9HCU8 107 aa5.29□□□□□ -1.56
TRAPPC11-209ENST00000512476 ENY2Q9NPA8 101 aa5.29□□□□□ -1.56
TRAPPC11-209ENST00000512476 TMEM74BQ9NUR3 256 aa5.29□□□□□ -1.56
TRAPPC11-209ENST00000512476 PHIPQ8WWQ0 1821 aa5.29□□□□□ -1.56
TRAPPC11-209ENST00000512476 CCDC182A6NF36 153 aa5.29□□□□□ -1.56
TRAPPC11-209ENST00000512476 FAM159BA6NKW6 160 aa5.29□□□□□ -1.56
TRAPPC11-209ENST00000512476 OR5B21A6NL26 309 aa5.29□□□□□ -1.56
TRAPPC11-209ENST00000512476 K7EP13 123 aa5.29□□□□□ -1.56
TRAPPC11-209ENST00000512476 PRKYO43930 277 aa5.29□□□□□ -1.56
TRAPPC11-209ENST00000512476 CNMDO75829 334 aa5.29□□□□□ -1.56
TRAPPC11-209ENST00000512476 TBX6O95947 436 aaPredicted RBP5.29□□□□□ -1.56
TRAPPC11-209ENST00000512476 CRYAAP02489 173 aa5.29□□□□□ -1.56
TRAPPC11-209ENST00000512476 RBP1P09455 135 aa5.29□□□□□ -1.56
TRAPPC11-209ENST00000512476 H2AFB1P0C5Y9 115 aa5.29□□□□□ -1.56
TRAPPC11-209ENST00000512476 RPL35P42766 123 aaKnown RBP5.29□□□□□ -1.56
TRAPPC11-209ENST00000512476 EFNA3P52797 238 aa5.29□□□□□ -1.56
TRAPPC11-209ENST00000512476 GNG2P59768 71 aa5.29□□□□□ -1.56
TRAPPC11-209ENST00000512476 ELF3P78545 371 aaPredicted RBP5.29□□□□□ -1.56
TRAPPC11-209ENST00000512476 DCAF10Q5QP82 559 aa5.29□□□□□ -1.56
TRAPPC11-209ENST00000512476 FAM27D1Q5T7N8 215 aa5.29□□□□□ -1.56
TRAPPC11-209ENST00000512476 TMEM215Q68D42 235 aa5.29□□□□□ -1.56
TRAPPC11-209ENST00000512476 FAM220AQ7Z4H9 259 aa5.29□□□□□ -1.56
TRAPPC11-209ENST00000512476 MRPL52Q86TS9 123 aaKnown RBP5.29□□□□□ -1.56
TRAPPC11-209ENST00000512476 COMMD7Q86VX2 200 aa5.29□□□□□ -1.56
TRAPPC11-209ENST00000512476 KBTBD8Q8NFY9 601 aa5.29□□□□□ -1.56
TRAPPC11-209ENST00000512476 KLHL31Q9H511 634 aa5.29□□□□□ -1.56
TRAPPC11-209ENST00000512476 DDIT4Q9NX09 232 aa5.29□□□□□ -1.56
TRAPPC11-209ENST00000512476 OR12D3Q9UGF7 316 aa5.29□□□□□ -1.56
TRAPPC11-209ENST00000512476 SAR1BQ9Y6B6 198 aa5.29□□□□□ -1.56
TRAPPC11-209ENST00000512476 MFNGO00587 321 aa5.28□□□□□ -1.56
TRAPPC11-209ENST00000512476 SLC37A4O43826 429 aa5.28□□□□□ -1.56
TRAPPC11-209ENST00000512476 SLC25A27O95847 323 aa5.28□□□□□ -1.56
TRAPPC11-209ENST00000512476 ARG1P05089 322 aa5.28□□□□□ -1.56
TRAPPC11-209ENST00000512476 JUNBP17275 347 aaPredicted RBP5.28□□□□□ -1.56
TRAPPC11-209ENST00000512476 CD58P19256 250 aa5.28□□□□□ -1.56
TRAPPC11-209ENST00000512476 MAKP20794 623 aa5.28□□□□□ -1.56
TRAPPC11-209ENST00000512476 IGFBP6P24592 240 aaPredicted RBP5.28□□□□□ -1.56
TRAPPC11-209ENST00000512476 RCVRNP35243 200 aa5.28□□□□□ -1.56
TRAPPC11-209ENST00000512476 GABRA4P48169 554 aa5.28□□□□□ -1.56
TRAPPC11-209ENST00000512476 PFN3P60673 137 aa5.28□□□□□ -1.56
TRAPPC11-209ENST00000512476 SMAGPQ0VAQ4 97 aa5.28□□□□□ -1.56
TRAPPC11-209ENST00000512476 UNC50Q53HI1 259 aa5.28□□□□□ -1.56
TRAPPC11-209ENST00000512476 FNBP1LQ5T0N5 605 aa5.28□□□□□ -1.56
TRAPPC11-209ENST00000512476 HENMT1Q5T8I9 393 aaKnown RBP5.28□□□□□ -1.56
TRAPPC11-209ENST00000512476 ATRAIDQ6UW56 229 aa5.28□□□□□ -1.56
TRAPPC11-209ENST00000512476 Q6ZRM9 215 aa5.28□□□□□ -1.56
TRAPPC11-209ENST00000512476 ZBTB8OSQ8IWT0 167 aa5.28□□□□□ -1.56
TRAPPC11-209ENST00000512476 CLIP4Q8N3C7 705 aa5.28□□□□□ -1.56
TRAPPC11-209ENST00000512476 OR8G5Q8NG78 346 aa5.28□□□□□ -1.56
TRAPPC11-209ENST00000512476 MBD6Q96DN6 1003 aa5.28□□□□□ -1.56
TRAPPC11-209ENST00000512476 ZMYND19Q96E35 227 aaPredicted RBP5.28□□□□□ -1.56
TRAPPC11-209ENST00000512476 MOCOSQ96EN8 888 aa5.28□□□□□ -1.56
TRAPPC11-209ENST00000512476 ADGRG7Q96K78 797 aa5.28□□□□□ -1.56
TRAPPC11-209ENST00000512476 MEPEQ9NQ76 525 aaPredicted RBP5.28□□□□□ -1.56
TRAPPC11-209ENST00000512476 SERTAD4Q9NUC0 356 aa5.28□□□□□ -1.56
TRAPPC11-209ENST00000512476 TP53TG1Q9Y2A0 90 aa5.28□□□□□ -1.56
TRAPPC11-209ENST00000512476 AMDHD2Q9Y303 409 aa5.28□□□□□ -1.56
TRAPPC11-209ENST00000512476 NCANO14594 1321 aa5.28□□□□□ -1.56
TRAPPC11-209ENST00000512476 WDR90Q96KV7 1748 aa5.28□□□□□ -1.56
TRAPPC11-209ENST00000512476 SCN4AP35499 1836 aa5.28□□□□□ -1.56
TRAPPC11-209ENST00000512476 POLR2AP24928 1970 aaKnown RBP5.28□□□□□ -1.56
TRAPPC11-209ENST00000512476 OTOFQ9HC10 1997 aa5.28□□□□□ -1.56
TRAPPC11-209ENST00000512476 hDV102S1A0JD36 115 aa5.28□□□□□ -1.56
TRAPPC11-209ENST00000512476 TRIM49D1C9J1S8 452 aa5.28□□□□□ -1.56
TRAPPC11-209ENST00000512476 TNFRSF13BO14836 293 aaPredicted RBP5.28□□□□□ -1.56
TRAPPC11-209ENST00000512476 PDE6DO43924 150 aa5.28□□□□□ -1.56
TRAPPC11-209ENST00000512476 HAND1O96004 215 aa5.28□□□□□ -1.56
TRAPPC11-209ENST00000512476 MT-CO2P00403 227 aa5.28□□□□□ -1.56
TRAPPC11-209ENST00000512476 C1QCP02747 245 aa5.28□□□□□ -1.56
TRAPPC11-209ENST00000512476 SERPINA7P05543 415 aa5.28□□□□□ -1.56
TRAPPC11-209ENST00000512476 ZNF250P15622 560 aa5.28□□□□□ -1.56
TRAPPC11-209ENST00000512476 ZNF25P17030 456 aaPredicted RBP5.28□□□□□ -1.56
TRAPPC11-209ENST00000512476 TALDO1P37837 337 aa5.28□□□□□ -1.56
TRAPPC11-209ENST00000512476 ZFP36L2P47974 494 aaKnown RBP5.28□□□□□ -1.56
TRAPPC11-209ENST00000512476 DLX6P56179 175 aa5.28□□□□□ -1.56
TRAPPC11-209ENST00000512476 BRWD1-AS2P59051 145 aa5.28□□□□□ -1.56
TRAPPC11-209ENST00000512476 DNAJB13P59910 316 aa5.28□□□□□ -1.56
TRAPPC11-209ENST00000512476 IFITM2Q01629 132 aa5.28□□□□□ -1.56
TRAPPC11-209ENST00000512476 SP4Q02446 784 aa5.28□□□□□ -1.56
TRAPPC11-209ENST00000512476 OR2F1Q13607 317 aa5.28□□□□□ -1.56
TRAPPC11-209ENST00000512476 GPRC6AQ5T6X5 926 aa5.28□□□□□ -1.56
TRAPPC11-209ENST00000512476 OR52E8Q6IFG1 317 aa5.28□□□□□ -1.56
TRAPPC11-209ENST00000512476 TMEM205Q6UW68 189 aa5.28□□□□□ -1.56
TRAPPC11-209ENST00000512476 SPNS3Q6ZMD2 512 aa5.28□□□□□ -1.56
TRAPPC11-209ENST00000512476 CREB3L2Q70SY1 520 aa5.28□□□□□ -1.56
TRAPPC11-209ENST00000512476 PEX26Q7Z412 305 aa5.28□□□□□ -1.56
TRAPPC11-209ENST00000512476 PIGZQ86VD9 579 aa5.28□□□□□ -1.56
TRAPPC11-209ENST00000512476 SLC30A8Q8IWU4 369 aa5.28□□□□□ -1.56
TRAPPC11-209ENST00000512476 MUC15Q8N387 334 aa5.28□□□□□ -1.56
TRAPPC11-209ENST00000512476 ZADH2Q8N4Q0 377 aa5.28□□□□□ -1.56
TRAPPC11-209ENST00000512476 OR7A2PQ8NGA2 310 aa5.28□□□□□ -1.56
TRAPPC11-209ENST00000512476 OR1K1Q8NGR3 316 aa5.28□□□□□ -1.56
TRAPPC11-209ENST00000512476 ARPC1AQ92747 370 aa5.28□□□□□ -1.56
TRAPPC11-209ENST00000512476 LINC00477Q96M19 166 aa5.28□□□□□ -1.56
TRAPPC11-209ENST00000512476 RASL11BQ9BPW5 248 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms