RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 POFUT1Q9H488 388 aa5.21□□□□□ -1.58
USP38-203ENST00000511739 SMOC1Q9H4F8 434 aa5.21□□□□□ -1.58
USP38-203ENST00000511739 ZNF586Q9NXT0 402 aa5.21□□□□□ -1.58
USP38-203ENST00000511739 SDCBPO00560 298 aaPredicted RBP5.21□□□□□ -1.58
USP38-203ENST00000511739 LYZL6O75951 148 aa5.21□□□□□ -1.58
USP38-203ENST00000511739 KLKB1P03952 638 aa5.21□□□□□ -1.58
USP38-203ENST00000511739 SLC25A5P05141 298 aaKnown RBP5.21□□□□□ -1.58
USP38-203ENST00000511739 SOX8P57073 446 aa5.21□□□□□ -1.58
USP38-203ENST00000511739 FAM3AP98173 230 aa5.21□□□□□ -1.58
USP38-203ENST00000511739 FAM53BQ14153 422 aa5.21□□□□□ -1.58
USP38-203ENST00000511739 ZNF620Q6ZNG0 422 aa5.21□□□□□ -1.58
USP38-203ENST00000511739 UBE3DQ7Z6J8 389 aa5.21□□□□□ -1.58
USP38-203ENST00000511739 CA13Q8N1Q1 262 aa5.21□□□□□ -1.58
USP38-203ENST00000511739 GNRHR2Q96P88 292 aa5.21□□□□□ -1.58
USP38-203ENST00000511739 SDF2Q99470 211 aa5.21□□□□□ -1.58
USP38-203ENST00000511739 ANKRD60Q9BZ19 345 aa5.21□□□□□ -1.58
USP38-203ENST00000511739 SLC25A22Q9H936 323 aa5.21□□□□□ -1.58
USP38-203ENST00000511739 SIRT5Q9NXA8 310 aa5.21□□□□□ -1.58
USP38-203ENST00000511739 UFC1Q9Y3C8 167 aa5.21□□□□□ -1.58
USP38-203ENST00000511739 COL11A1P12107 1806 aaPredicted RBP5.2□□□□□ -1.58
USP38-203ENST00000511739 C3orf80F5H4A9 247 aa5.2□□□□□ -1.58
USP38-203ENST00000511739 J3KRW8 73 aa5.2□□□□□ -1.58
USP38-203ENST00000511739 ZNF701M0R085 212 aaPredicted RBP5.2□□□□□ -1.58
USP38-203ENST00000511739 PLPP1O14494 284 aa5.2□□□□□ -1.58
USP38-203ENST00000511739 RAB7AP51149 207 aa5.2□□□□□ -1.58
USP38-203ENST00000511739 FOXF1Q12946 379 aa5.2□□□□□ -1.58
USP38-203ENST00000511739 HAGHQ16775 308 aa5.2□□□□□ -1.58
USP38-203ENST00000511739 FNDC7Q5VTL7 733 aa5.2□□□□□ -1.58
USP38-203ENST00000511739 FAHD2BQ6P2I3 314 aaPredicted RBP5.2□□□□□ -1.58
USP38-203ENST00000511739 OLIG3Q7RTU3 272 aa5.2□□□□□ -1.58
USP38-203ENST00000511739 TIPARPQ7Z3E1 657 aaKnown RBP5.2□□□□□ -1.58
USP38-203ENST00000511739 RTN4RL1Q86UN2 441 aaPredicted RBP5.2□□□□□ -1.58
USP38-203ENST00000511739 CADM4Q8NFZ8 388 aa5.2□□□□□ -1.58
USP38-203ENST00000511739 GATA6Q92908 595 aa5.2□□□□□ -1.58
USP38-203ENST00000511739 FGF14Q92915 247 aa5.2□□□□□ -1.58
USP38-203ENST00000511739 DUS3LQ96G46 650 aaKnown RBP5.2□□□□□ -1.58
USP38-203ENST00000511739 FAHD2AQ96GK7 314 aa5.2□□□□□ -1.58
USP38-203ENST00000511739 FKBP11Q9NYL4 201 aa5.2□□□□□ -1.58
USP38-203ENST00000511739 KPTNQ9Y664 436 aa5.2□□□□□ -1.58
USP38-203ENST00000511739 FRG2CA6NGY1 282 aa5.2□□□□□ -1.58
USP38-203ENST00000511739 LILRA5A6NI73 299 aa5.2□□□□□ -1.58
USP38-203ENST00000511739 K7ESF4 209 aa5.2□□□□□ -1.58
USP38-203ENST00000511739 SEMG1P04279 462 aa5.2□□□□□ -1.58
USP38-203ENST00000511739 CD1BP29016 333 aa5.2□□□□□ -1.58
USP38-203ENST00000511739 SUMO3P55854 103 aaPredicted RBP5.2□□□□□ -1.58
USP38-203ENST00000511739 SMAGPQ0VAQ4 97 aa5.2□□□□□ -1.58
USP38-203ENST00000511739 TNXAQ16473 311 aa5.2□□□□□ -1.58
USP38-203ENST00000511739 RNFT1Q5M7Z0 435 aa5.2□□□□□ -1.58
USP38-203ENST00000511739 ACER2Q5QJU3 275 aa5.2□□□□□ -1.58
USP38-203ENST00000511739 KTI12Q96EK9 354 aaPredicted RBP5.2□□□□□ -1.58
USP38-203ENST00000511739 ARHGDIGQ99819 225 aa5.2□□□□□ -1.58
USP38-203ENST00000511739 C1QTNF3Q9BXJ4 246 aa5.2□□□□□ -1.58
USP38-203ENST00000511739 AP5S1Q9NUS5 200 aa5.2□□□□□ -1.58
USP38-203ENST00000511739 SCN1AP35498 2009 aa5.2□□□□□ -1.58
USP38-203ENST00000511739 NGFP01138 241 aa5.2□□□□□ -1.58
USP38-203ENST00000511739 ATP1B1P05026 303 aa5.2□□□□□ -1.58
USP38-203ENST00000511739 CRISP2P16562 243 aa5.2□□□□□ -1.58
USP38-203ENST00000511739 EMX1Q04741 257 aaPredicted RBP5.2□□□□□ -1.58
USP38-203ENST00000511739 RPL18Q07020 188 aaKnown RBP5.2□□□□□ -1.58
USP38-203ENST00000511739 ZNF239Q16600 458 aaKnown RBP5.2□□□□□ -1.58
USP38-203ENST00000511739 CCSMST1Q4G0I0 132 aa5.2□□□□□ -1.58
USP38-203ENST00000511739 XKR7Q5GH72 579 aa5.2□□□□□ -1.58
USP38-203ENST00000511739 COX20Q5RI15 118 aa5.2□□□□□ -1.58
USP38-203ENST00000511739 OR2T2Q6IF00 324 aa5.2□□□□□ -1.58
USP38-203ENST00000511739 NCCRP1Q6ZVX7 275 aaPredicted RBP5.2□□□□□ -1.58
USP38-203ENST00000511739 HSD17B13Q7Z5P4 300 aaPredicted RBP5.2□□□□□ -1.58
USP38-203ENST00000511739 ABI3BPQ7Z7G0 1075 aa5.2□□□□□ -1.58
USP38-203ENST00000511739 ZNF441Q8N8Z8 693 aa5.2□□□□□ -1.58
USP38-203ENST00000511739 OR13C5Q8NGS8 318 aa5.2□□□□□ -1.58
USP38-203ENST00000511739 GPBAR1Q8TDU6 330 aa5.2□□□□□ -1.58
USP38-203ENST00000511739 LRRC29Q8WV35 223 aa5.2□□□□□ -1.58
USP38-203ENST00000511739 NEIL1Q96FI4 390 aaPredicted RBP5.2□□□□□ -1.58
USP38-203ENST00000511739 RHNO1Q9BSD3 238 aa5.2□□□□□ -1.58
USP38-203ENST00000511739 C20orf27Q9GZN8 174 aa5.2□□□□□ -1.58
USP38-203ENST00000511739 PBOV1Q9GZY1 135 aa5.2□□□□□ -1.58
USP38-203ENST00000511739 SIRT3Q9NTG7 399 aaPredicted RBP5.2□□□□□ -1.58
USP38-203ENST00000511739 MBD1Q9UIS9 605 aaPredicted RBP5.2□□□□□ -1.58
USP38-203ENST00000511739 PCOLCE2Q9UKZ9 415 aa5.2□□□□□ -1.58
USP38-203ENST00000511739 KNTC1P50748 2209 aa5.2□□□□□ -1.58
USP38-203ENST00000511739 NUP205Q92621 2012 aa5.2□□□□□ -1.58
USP38-203ENST00000511739 OR2F2O95006 317 aa5.2□□□□□ -1.58
USP38-203ENST00000511739 CXCL10P02778 98 aa5.2□□□□□ -1.58
USP38-203ENST00000511739 C21orf58P58505 322 aa5.2□□□□□ -1.58
USP38-203ENST00000511739 SLC35B1P78383 322 aa5.2□□□□□ -1.58
USP38-203ENST00000511739 LSM11P83369 360 aaKnown RBP eCLIP5.2□□□□□ -1.58
USP38-203ENST00000511739 HTR4Q13639 388 aa5.2□□□□□ -1.58
USP38-203ENST00000511739 GGTLC2Q14390 218 aa5.2□□□□□ -1.58
USP38-203ENST00000511739 IZUMO4Q1ZYL8 232 aa5.2□□□□□ -1.58
USP38-203ENST00000511739 RNF151Q2KHN1 245 aa5.2□□□□□ -1.58
USP38-203ENST00000511739 TMEM196Q5HYL7 178 aa5.2□□□□□ -1.58
USP38-203ENST00000511739 AVPI1Q5T686 147 aa5.2□□□□□ -1.58
USP38-203ENST00000511739 ZNF787Q6DD87 383 aa5.2□□□□□ -1.58
USP38-203ENST00000511739 JMJD6Q6NYC1 403 aaPredicted RBP5.2□□□□□ -1.58
USP38-203ENST00000511739 CYHR1Q6ZMK1 362 aa5.2□□□□□ -1.58
USP38-203ENST00000511739 ADPRHL1Q8NDY3 354 aa5.2□□□□□ -1.58
USP38-203ENST00000511739 OR51S1Q8NGJ8 323 aa5.2□□□□□ -1.58
USP38-203ENST00000511739 OR13D1Q8NGV5 346 aa5.2□□□□□ -1.58
USP38-203ENST00000511739 OR4Q3Q8NH05 313 aa5.2□□□□□ -1.58
USP38-203ENST00000511739 CHAC2Q8WUX2 184 aa5.2□□□□□ -1.58
USP38-203ENST00000511739 CDX2Q99626 313 aaPredicted RBP5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms