RNA–Protein interactions for RNA: ENST00000509043.1

HTT-205, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 380 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-205ENST00000509043 C9orf62Q8N4C0 152 aa8.06□□□□□ -1.12
HTT-205ENST00000509043 FTMTQ8N4E7 242 aa8.06□□□□□ -1.12
HTT-205ENST00000509043 PXT1Q8NFP0 134 aa8.06□□□□□ -1.12
HTT-205ENST00000509043 OR8S1Q8NH09 359 aa8.06□□□□□ -1.12
HTT-205ENST00000509043 TNFAIP8L1Q8WVP5 186 aa8.06□□□□□ -1.12
HTT-205ENST00000509043 NANOS1Q8WY41 292 aaKnown RBP8.06□□□□□ -1.12
HTT-205ENST00000509043 PIGTQ969N2 578 aa8.06□□□□□ -1.12
HTT-205ENST00000509043 ZNF775Q96BV0 537 aaPredicted RBP8.06□□□□□ -1.12
HTT-205ENST00000509043 GAL3ST1Q99999 423 aa8.06□□□□□ -1.12
HTT-205ENST00000509043 HES7Q9BYE0 225 aa8.06□□□□□ -1.12
HTT-205ENST00000509043 SELENOIQ9C0D9 397 aa8.06□□□□□ -1.12
HTT-205ENST00000509043 LDAHQ9H6V9 325 aa8.06□□□□□ -1.12
HTT-205ENST00000509043 ZNF552Q9H707 407 aaPredicted RBP8.06□□□□□ -1.12
HTT-205ENST00000509043 SLC7A10Q9NS82 523 aa8.06□□□□□ -1.12
HTT-205ENST00000509043 MGAT4CQ9UBM8 478 aa8.06□□□□□ -1.12
HTT-205ENST00000509043 KCNN3Q9UGI6 736 aa8.06□□□□□ -1.12
HTT-205ENST00000509043 HSF4Q9ULV5 492 aa8.06□□□□□ -1.12
HTT-205ENST00000509043 EDARQ9UNE0 448 aa8.06□□□□□ -1.12
HTT-205ENST00000509043 SLC7A11Q9UPY5 501 aa8.06□□□□□ -1.12
HTT-205ENST00000509043 CACNA1CQ13936 2221 aa8.06□□□□□ -1.12
HTT-205ENST00000509043 OR14I1A6ND48 311 aa8.05□□□□□ -1.12
HTT-205ENST00000509043 ZNF891A8MT65 544 aaPredicted RBP8.05□□□□□ -1.12
HTT-205ENST00000509043 CEACAM18A8MTB9 384 aa8.05□□□□□ -1.12
HTT-205ENST00000509043 FOXI3A8MTJ6 420 aaPredicted RBP8.05□□□□□ -1.12
HTT-205ENST00000509043 E9PLN8 166 aa8.05□□□□□ -1.12
HTT-205ENST00000509043 CNOT4O95628 575 aaKnown RBP8.05□□□□□ -1.12
HTT-205ENST00000509043 NRASP01111 189 aa8.05□□□□□ -1.12
HTT-205ENST00000509043 IGHG3P01860 377 aa8.05□□□□□ -1.12
HTT-205ENST00000509043 FCER2P06734 321 aa8.05□□□□□ -1.12
HTT-205ENST00000509043 DBHP09172 617 aa8.05□□□□□ -1.12
HTT-205ENST00000509043 CEACAM1P13688 526 aa8.05□□□□□ -1.12
HTT-205ENST00000509043 MGMTP16455 207 aa8.05□□□□□ -1.12
HTT-205ENST00000509043 ANXA7P20073 488 aaKnown RBP8.05□□□□□ -1.12
HTT-205ENST00000509043 MPGP29372 298 aa8.05□□□□□ -1.12
HTT-205ENST00000509043 PMELP40967 661 aa8.05□□□□□ -1.12
HTT-205ENST00000509043 ECI1P42126 302 aa8.05□□□□□ -1.12
HTT-205ENST00000509043 RBP2P50120 134 aa8.05□□□□□ -1.12
HTT-205ENST00000509043 MTCP1P56278 107 aa8.05□□□□□ -1.12
HTT-205ENST00000509043 ZP1P60852 638 aa8.05□□□□□ -1.12
HTT-205ENST00000509043 GMFBP60983 142 aa8.05□□□□□ -1.12
HTT-205ENST00000509043 CXADRP78310 365 aa8.05□□□□□ -1.12
HTT-205ENST00000509043 PLP2Q04941 152 aa8.05□□□□□ -1.12
HTT-205ENST00000509043 MALLQ13021 153 aa8.05□□□□□ -1.12
HTT-205ENST00000509043 C4orf46Q504U0 113 aa8.05□□□□□ -1.12
HTT-205ENST00000509043 PABPC1L2AQ5JQF8 200 aa8.05□□□□□ -1.12
HTT-205ENST00000509043 NSUN5P2Q63ZY6 315 aa8.05□□□□□ -1.12
HTT-205ENST00000509043 FAAP20Q6NZ36 180 aa8.05□□□□□ -1.12
HTT-205ENST00000509043 PLXDC2Q6UX71 529 aa8.05□□□□□ -1.12
HTT-205ENST00000509043 NLRC3Q7RTR2 1065 aa8.05□□□□□ -1.12
HTT-205ENST00000509043 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.05□□□□□ -1.12
HTT-205ENST00000509043 TUSC5Q8IXB3 177 aa8.05□□□□□ -1.12
HTT-205ENST00000509043 ZSCAN4Q8NAM6 433 aaPredicted RBP8.05□□□□□ -1.12
HTT-205ENST00000509043 TMEM104Q8NE00 496 aa8.05□□□□□ -1.12
HTT-205ENST00000509043 CSNK2A3Q8NEV1 391 aa8.05□□□□□ -1.12
HTT-205ENST00000509043 BEST4Q8NFU0 473 aa8.05□□□□□ -1.12
HTT-205ENST00000509043 OR2AK2Q8NG84 335 aa8.05□□□□□ -1.12
HTT-205ENST00000509043 OR4D10Q8NGI6 311 aa8.05□□□□□ -1.12
HTT-205ENST00000509043 OR51T1Q8NGJ9 327 aa8.05□□□□□ -1.12
HTT-205ENST00000509043 OR2T35Q8NGX2 323 aa8.05□□□□□ -1.12
HTT-205ENST00000509043 FNDC9Q8TBE3 224 aa8.05□□□□□ -1.12
HTT-205ENST00000509043 APOBEC3DQ96AK3 386 aaPredicted RBP8.05□□□□□ -1.12
HTT-205ENST00000509043 BORCS8Q96FH0 119 aa8.05□□□□□ -1.12
HTT-205ENST00000509043 WDYHV1Q96HA8 205 aa8.05□□□□□ -1.12
HTT-205ENST00000509043 GMPPAQ96IJ6 420 aaPredicted RBP8.05□□□□□ -1.12
HTT-205ENST00000509043 GPR137Q96N19 417 aa8.05□□□□□ -1.12
HTT-205ENST00000509043 SEC22CQ9BRL7 303 aa8.05□□□□□ -1.12
HTT-205ENST00000509043 SOX7Q9BT81 388 aa8.05□□□□□ -1.12
HTT-205ENST00000509043 MGAT4AQ9UM21 535 aa8.05□□□□□ -1.12
HTT-205ENST00000509043 HSPB11Q9Y547 144 aa8.05□□□□□ -1.12
HTT-205ENST00000509043 GPR179Q6PRD1 2367 aa8.04□□□□□ -1.12
HTT-205ENST00000509043 SPAARA0A1B0GVQ0 90 aa8.04□□□□□ -1.12
HTT-205ENST00000509043 MEIS3P1A6NDR6 274 aa8.04□□□□□ -1.12
HTT-205ENST00000509043 FAM90A10PA6NDY2 464 aa8.04□□□□□ -1.12
HTT-205ENST00000509043 FAM90A18PA6NE21 464 aa8.04□□□□□ -1.12
HTT-205ENST00000509043 FAM90A16PA6NEW6 464 aa8.04□□□□□ -1.12
HTT-205ENST00000509043 FAM90A20PA6NIJ5 464 aa8.04□□□□□ -1.12
HTT-205ENST00000509043 FAM90A8PA6NJQ4 464 aa8.04□□□□□ -1.12
HTT-205ENST00000509043 SLC22A20A6NK97 555 aa8.04□□□□□ -1.12
HTT-205ENST00000509043 FAM90A7PA6NKC0 464 aa8.04□□□□□ -1.12
HTT-205ENST00000509043 FAM90A22PA8MWA6 464 aa8.04□□□□□ -1.12
HTT-205ENST00000509043 FAM90A12PA8MX19 464 aa8.04□□□□□ -1.12
HTT-205ENST00000509043 FAM90A5PA8MXJ8 464 aa8.04□□□□□ -1.12
HTT-205ENST00000509043 FAM90A23PA8MXZ1 464 aa8.04□□□□□ -1.12
HTT-205ENST00000509043 SSX5O60225 188 aa8.04□□□□□ -1.12
HTT-205ENST00000509043 CSTBP04080 98 aaKnown RBP8.04□□□□□ -1.12
HTT-205ENST00000509043 TPOP07202 933 aa8.04□□□□□ -1.12
HTT-205ENST00000509043 OR4E1P0C645 316 aa8.04□□□□□ -1.12
HTT-205ENST00000509043 FAM90A15PP0C7V4 464 aa8.04□□□□□ -1.12
HTT-205ENST00000509043 FAM90A13PP0C7W8 464 aa8.04□□□□□ -1.12
HTT-205ENST00000509043 FAM90A14PP0C7W9 464 aa8.04□□□□□ -1.12
HTT-205ENST00000509043 FAM90A24PP0C7X0 464 aa8.04□□□□□ -1.12
HTT-205ENST00000509043 VSIG10L2P0DP72 767 aa8.04□□□□□ -1.12
HTT-205ENST00000509043 HOXB1P14653 301 aaPredicted RBP8.04□□□□□ -1.12
HTT-205ENST00000509043 GNB3P16520 340 aa8.04□□□□□ -1.12
HTT-205ENST00000509043 HLA-GP17693 338 aa8.04□□□□□ -1.12
HTT-205ENST00000509043 RFC3P40938 356 aa8.04□□□□□ -1.12
HTT-205ENST00000509043 EIF2S3P41091 472 aaKnown RBP8.04□□□□□ -1.12
HTT-205ENST00000509043 NBL1P41271 181 aa8.04□□□□□ -1.12
HTT-205ENST00000509043 FAM3AP98173 230 aa8.04□□□□□ -1.12
HTT-205ENST00000509043 FGL1Q08830 312 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms