RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 TECTBQ96PL2 329 aa13.43□□□□□ -0.26
LMNA-222ENST00000508500 ZNF747Q9BV97 191 aa13.43□□□□□ -0.26
LMNA-222ENST00000508500 FGF23Q9GZV9 251 aaPredicted RBP13.43□□□□□ -0.26
LMNA-222ENST00000508500 BRD7Q9NPI1 651 aa13.43□□□□□ -0.26
LMNA-222ENST00000508500 ERVK-18Q9QC07 812 aa13.43□□□□□ -0.26
LMNA-222ENST00000508500 RHBDD3Q9Y3P4 386 aa13.43□□□□□ -0.26
LMNA-222ENST00000508500 TRAV38-1A0A0B4J264 116 aa13.42□□□□□ -0.26
LMNA-222ENST00000508500 A6NLC8 198 aa13.42□□□□□ -0.26
LMNA-222ENST00000508500 ANKRD30BLA7E2S9 258 aa13.42□□□□□ -0.26
LMNA-222ENST00000508500 ZNF879B4DU55 563 aa13.42□□□□□ -0.26
LMNA-222ENST00000508500 ENSAO43768 121 aaKnown RBP13.42□□□□□ -0.26
LMNA-222ENST00000508500 OSMP13725 252 aa13.42□□□□□ -0.26
LMNA-222ENST00000508500 SLC2A5P22732 501 aa13.42□□□□□ -0.26
LMNA-222ENST00000508500 ACKR3P25106 362 aa13.42□□□□□ -0.26
LMNA-222ENST00000508500 MTNR1AP48039 350 aa13.42□□□□□ -0.26
LMNA-222ENST00000508500 HCCSP53701 268 aa13.42□□□□□ -0.26
LMNA-222ENST00000508500 TTC23Q5W5X9 447 aa13.42□□□□□ -0.26
LMNA-222ENST00000508500 WDR82Q6UXN9 313 aa13.42□□□□□ -0.26
LMNA-222ENST00000508500 CPOQ8IVL8 374 aa13.42□□□□□ -0.26
LMNA-222ENST00000508500 LYZL4Q96KX0 146 aa13.42□□□□□ -0.26
LMNA-222ENST00000508500 NR1H4Q96RI1 486 aaPredicted RBP13.42□□□□□ -0.26
LMNA-222ENST00000508500 PCGF1Q9BSM1 259 aa13.42□□□□□ -0.26
LMNA-222ENST00000508500 SIRPDQ9H106 197 aa13.42□□□□□ -0.26
LMNA-222ENST00000508500 ZMAT3Q9HA38 289 aaKnown RBP13.42□□□□□ -0.26
LMNA-222ENST00000508500 C14orf119Q9NWQ9 140 aa13.42□□□□□ -0.26
LMNA-222ENST00000508500 KAAG1Q9UBP8 84 aa13.42□□□□□ -0.26
LMNA-222ENST00000508500 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.41□□□□□ -0.26
LMNA-222ENST00000508500 CENPVL3A0A0U1RRI6 287 aa13.41□□□□□ -0.26
LMNA-222ENST00000508500 hCG_1807616A0A1W2PRN6 198 aa13.41□□□□□ -0.26
LMNA-222ENST00000508500 PRR23D1E9PI22 279 aaPredicted RBP13.41□□□□□ -0.26
LMNA-222ENST00000508500 DLGAP1O14490 977 aa13.41□□□□□ -0.26
LMNA-222ENST00000508500 DVL1O14640 695 aa13.41□□□□□ -0.26
LMNA-222ENST00000508500 HOXA3O43365 443 aaPredicted RBP13.41□□□□□ -0.26
LMNA-222ENST00000508500 NDUFA2O43678 99 aa13.41□□□□□ -0.26
LMNA-222ENST00000508500 LYNP07948 512 aa13.41□□□□□ -0.26
LMNA-222ENST00000508500 H2BFMP0C1H6 154 aa13.41□□□□□ -0.26
LMNA-222ENST00000508500 PRR23D2P0DMB1 279 aaPredicted RBP13.41□□□□□ -0.26
LMNA-222ENST00000508500 NAA10P41227 235 aaPredicted RBP13.41□□□□□ -0.26
LMNA-222ENST00000508500 IL18R1Q13478 541 aa13.41□□□□□ -0.26
LMNA-222ENST00000508500 KCNJ8Q15842 424 aa13.41□□□□□ -0.26
LMNA-222ENST00000508500 GFOD2Q3B7J2 385 aa13.41□□□□□ -0.26
LMNA-222ENST00000508500 PRR31Q5SQ13 230 aa13.41□□□□□ -0.26
LMNA-222ENST00000508500 OR52H1Q8NGJ2 320 aa13.41□□□□□ -0.26
LMNA-222ENST00000508500 OR8S1Q8NH09 359 aa13.41□□□□□ -0.26
LMNA-222ENST00000508500 THEM6Q8WUY1 208 aa13.41□□□□□ -0.26
LMNA-222ENST00000508500 LRRC29Q8WV35 223 aa13.41□□□□□ -0.26
LMNA-222ENST00000508500 TFAP2CQ92754 450 aa13.41□□□□□ -0.26
LMNA-222ENST00000508500 ITPKCQ96DU7 683 aa13.41□□□□□ -0.26
LMNA-222ENST00000508500 PGAM5Q96HS1 289 aa13.41□□□□□ -0.26
LMNA-222ENST00000508500 ADI1Q9BV57 179 aa13.41□□□□□ -0.26
LMNA-222ENST00000508500 TLNRD1Q9H1K6 362 aa13.41□□□□□ -0.26
LMNA-222ENST00000508500 ZNF556Q9HAH1 456 aa13.41□□□□□ -0.26
LMNA-222ENST00000508500 KIF17Q9P2E2 1029 aa13.41□□□□□ -0.26
LMNA-222ENST00000508500 PRR32B1ATL7 298 aa13.4□□□□□ -0.26
LMNA-222ENST00000508500 CDIPTO14735 213 aa13.4□□□□□ -0.26
LMNA-222ENST00000508500 SLC16A6O15403 523 aa13.4□□□□□ -0.26
LMNA-222ENST00000508500 PRODHO43272 600 aa13.4□□□□□ -0.26
LMNA-222ENST00000508500 APOC1P02654 83 aa13.4□□□□□ -0.26
LMNA-222ENST00000508500 ALOX5APP20292 161 aa13.4□□□□□ -0.26
LMNA-222ENST00000508500 CAPGP40121 348 aa13.4□□□□□ -0.26
LMNA-222ENST00000508500 DAPP51397 102 aa13.4□□□□□ -0.26
LMNA-222ENST00000508500 WDR38Q5JTN6 314 aa13.4□□□□□ -0.26
LMNA-222ENST00000508500 CD276Q5ZPR3 534 aa13.4□□□□□ -0.26
LMNA-222ENST00000508500 BTN2A1Q7KYR7 527 aa13.4□□□□□ -0.26
LMNA-222ENST00000508500 ZNF555Q8NEP9 628 aa13.4□□□□□ -0.26
LMNA-222ENST00000508500 SLC25A28Q96A46 364 aa13.4□□□□□ -0.26
LMNA-222ENST00000508500 WDFY2Q96P53 400 aa13.4□□□□□ -0.26
LMNA-222ENST00000508500 CCL13Q99616 98 aa13.4□□□□□ -0.26
LMNA-222ENST00000508500 ANKRD60Q9BZ19 345 aa13.4□□□□□ -0.26
LMNA-222ENST00000508500 OR10A2Q9H208 303 aa13.4□□□□□ -0.26
LMNA-222ENST00000508500 SP140LQ9H930 580 aa13.4□□□□□ -0.26
LMNA-222ENST00000508500 SLC25A19Q9HC21 320 aa13.4□□□□□ -0.26
LMNA-222ENST00000508500 TRIM36Q9NQ86 728 aa13.4□□□□□ -0.26
LMNA-222ENST00000508500 CCDC182A6NF36 153 aa13.39□□□□□ -0.27
LMNA-222ENST00000508500 ZNF850A8MQ14 1090 aa13.39□□□□□ -0.27
LMNA-222ENST00000508500 SRRM5B3KS81 715 aa13.39□□□□□ -0.27
LMNA-222ENST00000508500 P2RY10O00398 339 aa13.39□□□□□ -0.27
LMNA-222ENST00000508500 TMPRSS2O15393 492 aa13.39□□□□□ -0.27
LMNA-222ENST00000508500 TOX4O94842 621 aa13.39□□□□□ -0.27
LMNA-222ENST00000508500 LIPFP07098 398 aa13.39□□□□□ -0.27
LMNA-222ENST00000508500 PAICSP22234 425 aaKnown RBP13.39□□□□□ -0.27
LMNA-222ENST00000508500 ADARB1P78563 741 aaKnown RBP13.39□□□□□ -0.27
LMNA-222ENST00000508500 MZT1Q08AG7 82 aa13.39□□□□□ -0.27
LMNA-222ENST00000508500 GPR157Q5UAW9 335 aa13.39□□□□□ -0.27
LMNA-222ENST00000508500 C16orf87Q6PH81 154 aa13.39□□□□□ -0.27
LMNA-222ENST00000508500 Q6YL49 198 aa13.39□□□□□ -0.27
LMNA-222ENST00000508500 OR8B12Q8NGG6 310 aa13.39□□□□□ -0.27
LMNA-222ENST00000508500 HPSE2Q8WWQ2 592 aa13.39□□□□□ -0.27
LMNA-222ENST00000508500 PAPOLGQ9BWT3 736 aaKnown RBP13.39□□□□□ -0.27
LMNA-222ENST00000508500 UNKLQ9H9P5 680 aaKnown RBP13.39□□□□□ -0.27
LMNA-222ENST00000508500 KRT84Q9NSB2 600 aa13.39□□□□□ -0.27
LMNA-222ENST00000508500 LRP12Q9Y561 859 aa13.39□□□□□ -0.27
LMNA-222ENST00000508500 HSPE1-MOB4S4R3N1 261 aa13.39□□□□□ -0.27
LMNA-222ENST00000508500 DSCAML1Q8TD84 2053 aa13.38□□□□□ -0.27
LMNA-222ENST00000508500 TFF1P04155 84 aa13.38□□□□□ -0.27
LMNA-222ENST00000508500 HMGN1P05114 100 aa13.38□□□□□ -0.27
LMNA-222ENST00000508500 MDKP21741 143 aaPredicted RBP13.38□□□□□ -0.27
LMNA-222ENST00000508500 MYF6P23409 242 aa13.38□□□□□ -0.27
LMNA-222ENST00000508500 OMGP23515 440 aa13.38□□□□□ -0.27
LMNA-222ENST00000508500 CFL1P23528 166 aaKnown RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms