RNA–Protein interactions for RNA: ENST00000506896.1

SNX25-204, Transcript of sorting nexin 25, humanhuman

TSL 2

Gene SNX25, Length 518 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-204ENST00000506896 CCR9P51686 369 aa16.72■□□□□ 0.27
SNX25-204ENST00000506896 MED21Q13503 144 aa16.72■□□□□ 0.27
SNX25-204ENST00000506896 MPPED2Q15777 294 aa16.72■□□□□ 0.27
SNX25-204ENST00000506896 TMEM155Q4W5P6 130 aa16.72■□□□□ 0.27
SNX25-204ENST00000506896 PRAMEF6Q5VXH4 476 aa16.72■□□□□ 0.27
SNX25-204ENST00000506896 ZDHHC23Q8IYP9 409 aa16.72■□□□□ 0.27
SNX25-204ENST00000506896 MUC20Q8N307 709 aaPredicted RBP16.72■□□□□ 0.27
SNX25-204ENST00000506896 PRSS35Q8N3Z0 413 aa16.72■□□□□ 0.27
SNX25-204ENST00000506896 SPICQ8N5J4 248 aa16.72■□□□□ 0.27
SNX25-204ENST00000506896 OR2G2Q8NGZ5 317 aa16.72■□□□□ 0.27
SNX25-204ENST00000506896 PELI1Q96FA3 418 aa16.72■□□□□ 0.27
SNX25-204ENST00000506896 C1orf159Q96HA4 380 aa16.72■□□□□ 0.27
SNX25-204ENST00000506896 GAL3ST1Q99999 423 aa16.72■□□□□ 0.27
SNX25-204ENST00000506896 ZNF649Q9BS31 505 aa16.72■□□□□ 0.27
SNX25-204ENST00000506896 UFSP2Q9NUQ7 469 aa16.72■□□□□ 0.27
SNX25-204ENST00000506896 DCAF16Q9NXF7 216 aa16.72■□□□□ 0.27
SNX25-204ENST00000506896 CNOT2Q9NZN8 540 aaKnown RBP16.72■□□□□ 0.27
SNX25-204ENST00000506896 DIMT1Q9UNQ2 313 aaKnown RBP16.72■□□□□ 0.27
SNX25-204ENST00000506896 PIGLQ9Y2B2 252 aa16.72■□□□□ 0.27
SNX25-204ENST00000506896 EFCAB10A6NFE3 127 aa16.71■□□□□ 0.27
SNX25-204ENST00000506896 TMEM210A6NLX4 147 aa16.71■□□□□ 0.27
SNX25-204ENST00000506896 WNT9BO14905 357 aa16.71■□□□□ 0.27
SNX25-204ENST00000506896 SYT7O43581 403 aa16.71■□□□□ 0.27
SNX25-204ENST00000506896 CYB5R3P00387 301 aaPredicted RBP16.71■□□□□ 0.27
SNX25-204ENST00000506896 GRPP07492 148 aa16.71■□□□□ 0.27
SNX25-204ENST00000506896 RPSAP08865 295 aaKnown RBP16.71■□□□□ 0.27
SNX25-204ENST00000506896 HTR1AP08908 422 aa16.71■□□□□ 0.27
SNX25-204ENST00000506896 PIPP12273 146 aaPredicted RBP16.71■□□□□ 0.27
SNX25-204ENST00000506896 MYL12AP19105 171 aa16.71■□□□□ 0.27
SNX25-204ENST00000506896 IL2RGP31785 369 aa16.71■□□□□ 0.27
SNX25-204ENST00000506896 PSMB10P40306 273 aa16.71■□□□□ 0.27
SNX25-204ENST00000506896 MDH2P40926 338 aaKnown RBP16.71■□□□□ 0.27
SNX25-204ENST00000506896 PMELP40967 661 aa16.71■□□□□ 0.27
SNX25-204ENST00000506896 CDH15P55291 814 aa16.71■□□□□ 0.27
SNX25-204ENST00000506896 LMO4P61968 165 aa16.71■□□□□ 0.27
SNX25-204ENST00000506896 CSNK2BP67870 215 aa16.71■□□□□ 0.27
SNX25-204ENST00000506896 LRRC28Q86X40 367 aaPredicted RBP16.71■□□□□ 0.27
SNX25-204ENST00000506896 KLHL36Q8N4N3 616 aa16.71■□□□□ 0.27
SNX25-204ENST00000506896 LINC01356Q8N9X3 169 aa16.71■□□□□ 0.27
SNX25-204ENST00000506896 OR5P3Q8WZ94 311 aa16.71■□□□□ 0.27
SNX25-204ENST00000506896 RNF166Q96A37 237 aaPredicted RBP16.71■□□□□ 0.27
SNX25-204ENST00000506896 MSI2Q96DH6 328 aaKnown RBP16.71■□□□□ 0.27
SNX25-204ENST00000506896 TMEM80Q96HE8 168 aa16.71■□□□□ 0.27
SNX25-204ENST00000506896 PLCXD1Q9NUJ7 323 aa16.71■□□□□ 0.27
SNX25-204ENST00000506896 TMEM160Q9NX00 188 aa16.71■□□□□ 0.27
SNX25-204ENST00000506896 EXOSC1Q9Y3B2 195 aaKnown RBP16.71■□□□□ 0.27
SNX25-204ENST00000506896 A6NLC8 198 aa16.7■□□□□ 0.26
SNX25-204ENST00000506896 B4DSR2 109 aa16.7■□□□□ 0.26
SNX25-204ENST00000506896 ISG15P05161 165 aa16.7■□□□□ 0.26
SNX25-204ENST00000506896 LIMS3P0CW19 117 aa16.7■□□□□ 0.26
SNX25-204ENST00000506896 LIMS4P0CW20 117 aa16.7■□□□□ 0.26
SNX25-204ENST00000506896 FAHP16930 419 aa16.7■□□□□ 0.26
SNX25-204ENST00000506896 KIR3DL2P43630 455 aa16.7■□□□□ 0.26
SNX25-204ENST00000506896 ODF4Q2M2E3 257 aa16.7■□□□□ 0.26
SNX25-204ENST00000506896 CEACAM21Q3KPI0 293 aa16.7■□□□□ 0.26
SNX25-204ENST00000506896 TMEM244Q5VVB8 128 aa16.7■□□□□ 0.26
SNX25-204ENST00000506896 TMPRSS11AQ6ZMR5 421 aa16.7■□□□□ 0.26
SNX25-204ENST00000506896 OR1M1Q8NGA1 313 aa16.7■□□□□ 0.26
SNX25-204ENST00000506896 OR14K1Q8NGZ2 314 aa16.7■□□□□ 0.26
SNX25-204ENST00000506896 C10orf35Q96D05 121 aa16.7■□□□□ 0.26
SNX25-204ENST00000506896 ZNF665Q9H7R5 613 aa16.7■□□□□ 0.26
SNX25-204ENST00000506896 PLEKHA1Q9HB21 404 aa16.7■□□□□ 0.26
SNX25-204ENST00000506896 C1orf123Q9NWV4 160 aa16.7■□□□□ 0.26
SNX25-204ENST00000506896 CHCHD3Q9NX63 227 aaKnown RBP16.7■□□□□ 0.26
SNX25-204ENST00000506896 FRRS1LQ9P0K9 344 aa16.7■□□□□ 0.26
SNX25-204ENST00000506896 RNF7Q9UBF6 113 aa16.7■□□□□ 0.26
SNX25-204ENST00000506896 CAB39Q9Y376 341 aaPredicted RBP16.7■□□□□ 0.26
SNX25-204ENST00000506896 LOC107986453A0A1B0GWG9 222 aa16.69■□□□□ 0.26
SNX25-204ENST00000506896 OR5B21A6NL26 309 aa16.69■□□□□ 0.26
SNX25-204ENST00000506896 IGHV2-5P01817 119 aa16.69■□□□□ 0.26
SNX25-204ENST00000506896 CPT2P23786 658 aa16.69■□□□□ 0.26
SNX25-204ENST00000506896 GBX2P52951 348 aaPredicted RBP16.69■□□□□ 0.26
SNX25-204ENST00000506896 ZNF154Q13106 437 aa16.69■□□□□ 0.26
SNX25-204ENST00000506896 ZMYND11Q15326 602 aa16.69■□□□□ 0.26
SNX25-204ENST00000506896 FAM76BQ5HYJ3 339 aa16.69■□□□□ 0.26
SNX25-204ENST00000506896 CLVS2Q5SYC1 327 aa16.69■□□□□ 0.26
SNX25-204ENST00000506896 FAM166AQ6J272 317 aa16.69■□□□□ 0.26
SNX25-204ENST00000506896 IZUMO2Q6UXV1 221 aa16.69■□□□□ 0.26
SNX25-204ENST00000506896 OR5A2Q8NGI9 324 aa16.69■□□□□ 0.26
SNX25-204ENST00000506896 GGHQ92820 318 aa16.69■□□□□ 0.26
SNX25-204ENST00000506896 RNF170Q96K19 258 aa16.69■□□□□ 0.26
SNX25-204ENST00000506896 TLNRD1Q9H1K6 362 aa16.69■□□□□ 0.26
SNX25-204ENST00000506896 PPP1R3EQ9H7J1 279 aa16.69■□□□□ 0.26
SNX25-204ENST00000506896 ISG20L2Q9H9L3 353 aaKnown RBP16.69■□□□□ 0.26
SNX25-204ENST00000506896 PCDHB10Q9UN67 800 aa16.69■□□□□ 0.26
SNX25-204ENST00000506896 PPIAL4EA0A075B759 164 aa16.68■□□□□ 0.26
SNX25-204ENST00000506896 PPIAL4DF5H284 164 aa16.68■□□□□ 0.26
SNX25-204ENST00000506896 NRASP01111 189 aa16.68■□□□□ 0.26
SNX25-204ENST00000506896 PPIAL4FP0DN26 164 aa16.68■□□□□ 0.26
SNX25-204ENST00000506896 ZNF16P17020 682 aaPredicted RBP16.68■□□□□ 0.26
SNX25-204ENST00000506896 TGM4P49221 684 aa16.68■□□□□ 0.26
SNX25-204ENST00000506896 NANOS3P60323 173 aaKnown RBP16.68■□□□□ 0.26
SNX25-204ENST00000506896 GNG3P63215 75 aa16.68■□□□□ 0.26
SNX25-204ENST00000506896 ST3GAL4Q11206 333 aa16.68■□□□□ 0.26
SNX25-204ENST00000506896 ALKBH1Q13686 389 aaKnown RBP16.68■□□□□ 0.26
SNX25-204ENST00000506896 TMEM42Q69YG0 159 aa16.68■□□□□ 0.26
SNX25-204ENST00000506896 LAIR2Q6ISS4 152 aa16.68■□□□□ 0.26
SNX25-204ENST00000506896 KCTD8Q6ZWB6 473 aa16.68■□□□□ 0.26
SNX25-204ENST00000506896 WDR86Q86TI4 376 aa16.68■□□□□ 0.26
SNX25-204ENST00000506896 BPIFB6Q8NFQ5 453 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms