RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 A0A1B0GTI1 187 aa7.18□□□□□ -1.26
PDGFC-205ENST00000506880 LOC107986453A0A1B0GWG9 222 aa7.18□□□□□ -1.26
PDGFC-205ENST00000506880 ZSCAN5BA6NJL1 495 aa7.18□□□□□ -1.26
PDGFC-205ENST00000506880 VWC2LB2RUY7 222 aa7.18□□□□□ -1.26
PDGFC-205ENST00000506880 GPR37O15354 613 aa7.18□□□□□ -1.26
PDGFC-205ENST00000506880 XPNPEP2O43895 674 aa7.18□□□□□ -1.26
PDGFC-205ENST00000506880 NOS1APO75052 506 aaPredicted RBP7.18□□□□□ -1.26
PDGFC-205ENST00000506880 RP2O75695 350 aa7.18□□□□□ -1.26
PDGFC-205ENST00000506880 NRASP01111 189 aa7.18□□□□□ -1.26
PDGFC-205ENST00000506880 IGHV4-39P01824 125 aa7.18□□□□□ -1.26
PDGFC-205ENST00000506880 ALDOBP05062 364 aa7.18□□□□□ -1.26
PDGFC-205ENST00000506880 MUC1P15941 1255 aaPredicted RBP7.18□□□□□ -1.26
PDGFC-205ENST00000506880 FSTP19883 344 aa7.18□□□□□ -1.26
PDGFC-205ENST00000506880 ALDH3B1P43353 468 aa7.18□□□□□ -1.26
PDGFC-205ENST00000506880 ETV1P50549 477 aa7.18□□□□□ -1.26
PDGFC-205ENST00000506880 PSMD7P51665 324 aa7.18□□□□□ -1.26
PDGFC-205ENST00000506880 FUT6P51993 359 aa7.18□□□□□ -1.26
PDGFC-205ENST00000506880 CAPZA1P52907 286 aa7.18□□□□□ -1.26
PDGFC-205ENST00000506880 HCCSP53701 268 aa7.18□□□□□ -1.26
PDGFC-205ENST00000506880 ERVS71-1P61550 626 aa7.18□□□□□ -1.26
PDGFC-205ENST00000506880 TPBGQ13641 420 aa7.18□□□□□ -1.26
PDGFC-205ENST00000506880 HLXQ14774 488 aaPredicted RBP7.18□□□□□ -1.26
PDGFC-205ENST00000506880 CLEC12BQ2HXU8 276 aa7.18□□□□□ -1.26
PDGFC-205ENST00000506880 TP53I3Q53FA7 332 aa7.18□□□□□ -1.26
PDGFC-205ENST00000506880 WDR38Q5JTN6 314 aa7.18□□□□□ -1.26
PDGFC-205ENST00000506880 Q5PR19 223 aa7.18□□□□□ -1.26
PDGFC-205ENST00000506880 SPATA46Q5T0L3 261 aa7.18□□□□□ -1.26
PDGFC-205ENST00000506880 HIST2H2BCQ6DN03 193 aa7.18□□□□□ -1.26
PDGFC-205ENST00000506880 LHFPL2Q6ZUX7 228 aa7.18□□□□□ -1.26
PDGFC-205ENST00000506880 NAA40Q86UY6 237 aa7.18□□□□□ -1.26
PDGFC-205ENST00000506880 LRP11Q86VZ4 500 aa7.18□□□□□ -1.26
PDGFC-205ENST00000506880 COMMD2Q86X83 199 aa7.18□□□□□ -1.26
PDGFC-205ENST00000506880 SAXO1Q8IYX7 474 aa7.18□□□□□ -1.26
PDGFC-205ENST00000506880 SPICQ8N5J4 248 aa7.18□□□□□ -1.26
PDGFC-205ENST00000506880 ZSCAN4Q8NAM6 433 aaPredicted RBP7.18□□□□□ -1.26
PDGFC-205ENST00000506880 OR2Z1Q8NG97 314 aa7.18□□□□□ -1.26
PDGFC-205ENST00000506880 C10orf105Q8TEF2 133 aa7.18□□□□□ -1.26
PDGFC-205ENST00000506880 OR5P3Q8WZ94 311 aa7.18□□□□□ -1.26
PDGFC-205ENST00000506880 RAB39BQ96DA2 213 aa7.18□□□□□ -1.26
PDGFC-205ENST00000506880 ITPKCQ96DU7 683 aa7.18□□□□□ -1.26
PDGFC-205ENST00000506880 MEGF10Q96KG7 1140 aa7.18□□□□□ -1.26
PDGFC-205ENST00000506880 TBX5Q99593 518 aa7.18□□□□□ -1.26
PDGFC-205ENST00000506880 PAPOLGQ9BWT3 736 aaKnown RBP7.18□□□□□ -1.26
PDGFC-205ENST00000506880 PKIBQ9C010 78 aa7.18□□□□□ -1.26
PDGFC-205ENST00000506880 TPK1Q9H3S4 243 aa7.18□□□□□ -1.26
PDGFC-205ENST00000506880 MYEF2Q9P2K5 600 aaKnown RBP7.18□□□□□ -1.26
PDGFC-205ENST00000506880 CKLFQ9UBR5 152 aa7.18□□□□□ -1.26
PDGFC-205ENST00000506880 F8P00451 2351 aa7.18□□□□□ -1.26
PDGFC-205ENST00000506880 CSMD2Q7Z408 3487 aa7.18□□□□□ -1.26
PDGFC-205ENST00000506880 PPIAL4EA0A075B759 164 aa7.17□□□□□ -1.26
PDGFC-205ENST00000506880 PPIAL4CA0A0B4J2A2 164 aa7.17□□□□□ -1.26
PDGFC-205ENST00000506880 ANKRD61A6NGH8 418 aa7.17□□□□□ -1.26
PDGFC-205ENST00000506880 PRR32B1ATL7 298 aa7.17□□□□□ -1.26
PDGFC-205ENST00000506880 PTGES3LE9PB15 166 aa7.17□□□□□ -1.26
PDGFC-205ENST00000506880 PPIAL4DF5H284 164 aa7.17□□□□□ -1.26
PDGFC-205ENST00000506880 TPD52L2O43399 206 aaKnown RBP7.17□□□□□ -1.26
PDGFC-205ENST00000506880 RPP14O95059 124 aaKnown RBP7.17□□□□□ -1.26
PDGFC-205ENST00000506880 ZFPL1O95159 310 aa7.17□□□□□ -1.26
PDGFC-205ENST00000506880 PPIAL4FP0DN26 164 aa7.17□□□□□ -1.26
PDGFC-205ENST00000506880 SLC2A1P11166 492 aa7.17□□□□□ -1.26
PDGFC-205ENST00000506880 NAT2P11245 290 aa7.17□□□□□ -1.26
PDGFC-205ENST00000506880 CPEP16870 476 aa7.17□□□□□ -1.26
PDGFC-205ENST00000506880 ZNF20P17024 532 aa7.17□□□□□ -1.26
PDGFC-205ENST00000506880 GATA3P23771 443 aa7.17□□□□□ -1.26
PDGFC-205ENST00000506880 EEF1B2P24534 225 aaKnown RBP7.17□□□□□ -1.26
PDGFC-205ENST00000506880 MPZP25189 248 aa7.17□□□□□ -1.26
PDGFC-205ENST00000506880 C21orf33P30042 268 aaPredicted RBP7.17□□□□□ -1.26
PDGFC-205ENST00000506880 CDKN1AP38936 164 aa7.17□□□□□ -1.26
PDGFC-205ENST00000506880 MDH2P40926 338 aaKnown RBP7.17□□□□□ -1.26
PDGFC-205ENST00000506880 NR4A2P43354 598 aa7.17□□□□□ -1.26
PDGFC-205ENST00000506880 NPY4RP50391 375 aa7.17□□□□□ -1.26
PDGFC-205ENST00000506880 CHN2P52757 468 aa7.17□□□□□ -1.26
PDGFC-205ENST00000506880 MFGE8Q08431 387 aaPredicted RBP7.17□□□□□ -1.26
PDGFC-205ENST00000506880 Q499Y3 187 aa7.17□□□□□ -1.26
PDGFC-205ENST00000506880 UBE2UQ5VVX9 321 aa7.17□□□□□ -1.26
PDGFC-205ENST00000506880 ZNF529Q6P280 563 aa7.17□□□□□ -1.26
PDGFC-205ENST00000506880 ZNF773Q6PK81 442 aa7.17□□□□□ -1.26
PDGFC-205ENST00000506880 Q6ZR03 302 aa7.17□□□□□ -1.26
PDGFC-205ENST00000506880 SPATC1Q76KD6 591 aa7.17□□□□□ -1.26
PDGFC-205ENST00000506880 PRSS35Q8N3Z0 413 aa7.17□□□□□ -1.26
PDGFC-205ENST00000506880 RFLNBQ8N5W9 214 aa7.17□□□□□ -1.26
PDGFC-205ENST00000506880 NKAIN3Q8N8D7 197 aa7.17□□□□□ -1.26
PDGFC-205ENST00000506880 OR2AE1Q8NHA4 323 aa7.17□□□□□ -1.26
PDGFC-205ENST00000506880 UFD1Q92890 307 aa7.17□□□□□ -1.26
PDGFC-205ENST00000506880 PERPQ96FX8 193 aa7.17□□□□□ -1.26
PDGFC-205ENST00000506880 C1orf159Q96HA4 380 aa7.17□□□□□ -1.26
PDGFC-205ENST00000506880 LYZL4Q96KX0 146 aa7.17□□□□□ -1.26
PDGFC-205ENST00000506880 OR2V2Q96R30 315 aa7.17□□□□□ -1.26
PDGFC-205ENST00000506880 OR51B6Q9H340 312 aa7.17□□□□□ -1.26
PDGFC-205ENST00000506880 LIME1Q9H400 295 aa7.17□□□□□ -1.26
PDGFC-205ENST00000506880 ZNF696Q9H7X3 374 aa7.17□□□□□ -1.26
PDGFC-205ENST00000506880 GCM1Q9NP62 436 aa7.17□□□□□ -1.26
PDGFC-205ENST00000506880 ACOT13Q9NPJ3 140 aa7.17□□□□□ -1.26
PDGFC-205ENST00000506880 PAK1IP1Q9NWT1 392 aaPredicted RBP7.17□□□□□ -1.26
PDGFC-205ENST00000506880 ZNF319Q9P2F9 582 aa7.17□□□□□ -1.26
PDGFC-205ENST00000506880 ERVK-18Q9QC07 812 aa7.17□□□□□ -1.26
PDGFC-205ENST00000506880 RNF7Q9UBF6 113 aa7.17□□□□□ -1.26
PDGFC-205ENST00000506880 FOXJ3Q9UPW0 622 aa7.17□□□□□ -1.26
PDGFC-205ENST00000506880 DHDHQ9UQ10 334 aa7.17□□□□□ -1.26
PDGFC-205ENST00000506880 PIGLQ9Y2B2 252 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 103.6 ms