RNA–Protein interactions for RNA: ENST00000504243.5

TRAPPC13-205, Transcript of trafficking protein particle complex 13, humanhuman

TSL 5

Gene TRAPPC13, Length 643 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-205ENST00000504243 TEX30Q5JUR7 227 aa2.88□□□□□ -1.95
TRAPPC13-205ENST00000504243 CCDC122Q5T0U0 273 aa2.88□□□□□ -1.95
TRAPPC13-205ENST00000504243 HMGN2P46Q86SG4 172 aa2.88□□□□□ -1.95
TRAPPC13-205ENST00000504243 ERO1BQ86YB8 467 aa2.88□□□□□ -1.95
TRAPPC13-205ENST00000504243 LRRC52Q8N7C0 313 aa2.88□□□□□ -1.95
TRAPPC13-205ENST00000504243 OR5T1Q8NG75 326 aa2.88□□□□□ -1.95
TRAPPC13-205ENST00000504243 OR4M1Q8NGD0 313 aa2.88□□□□□ -1.95
TRAPPC13-205ENST00000504243 RTN4IP1Q8WWV3 396 aaPredicted RBP2.88□□□□□ -1.95
TRAPPC13-205ENST00000504243 Q96MT0 163 aa2.88□□□□□ -1.95
TRAPPC13-205ENST00000504243 OR4K3Q96R72 315 aa2.88□□□□□ -1.95
TRAPPC13-205ENST00000504243 NUDT9Q9BW91 350 aa2.88□□□□□ -1.95
TRAPPC13-205ENST00000504243 LZTFL1Q9NQ48 299 aa2.88□□□□□ -1.95
TRAPPC13-205ENST00000504243 CBY1Q9Y3M2 126 aa2.88□□□□□ -1.95
TRAPPC13-205ENST00000504243 NEURL4Q96JN8 1562 aa2.87□□□□□ -1.95
TRAPPC13-205ENST00000504243 IGLV3-12A0A075B6K2 115 aa2.87□□□□□ -1.95
TRAPPC13-205ENST00000504243 IGKV6-21A0A0C4DH24 114 aa2.87□□□□□ -1.95
TRAPPC13-205ENST00000504243 A0A1W2PPV4 95 aa2.87□□□□□ -1.95
TRAPPC13-205ENST00000504243 CTNSO60931 367 aa2.87□□□□□ -1.95
TRAPPC13-205ENST00000504243 CYB5R3P00387 301 aaPredicted RBP2.87□□□□□ -1.95
TRAPPC13-205ENST00000504243 CD74P04233 296 aa2.87□□□□□ -1.95
TRAPPC13-205ENST00000504243 RPN2P04844 631 aa2.87□□□□□ -1.95
TRAPPC13-205ENST00000504243 STAG3L2P0CL84 134 aa2.87□□□□□ -1.95
TRAPPC13-205ENST00000504243 HOXB8P17481 243 aaPredicted RBP2.87□□□□□ -1.95
TRAPPC13-205ENST00000504243 CFHR2P36980 270 aa2.87□□□□□ -1.95
TRAPPC13-205ENST00000504243 PRLHRP49683 370 aa2.87□□□□□ -1.95
TRAPPC13-205ENST00000504243 OR1Q1Q15612 314 aa2.87□□□□□ -1.95
TRAPPC13-205ENST00000504243 LY6EQ16553 131 aa2.87□□□□□ -1.95
TRAPPC13-205ENST00000504243 OR2W3Q7Z3T1 314 aa2.87□□□□□ -1.95
TRAPPC13-205ENST00000504243 ARHGAP18Q8N392 663 aa2.87□□□□□ -1.95
TRAPPC13-205ENST00000504243 OR51L1Q8NGJ5 315 aa2.87□□□□□ -1.95
TRAPPC13-205ENST00000504243 BAALCQ8WXS3 180 aa2.87□□□□□ -1.95
TRAPPC13-205ENST00000504243 TOP1MTQ969P6 601 aa2.87□□□□□ -1.95
TRAPPC13-205ENST00000504243 KCNS1Q96KK3 526 aa2.87□□□□□ -1.95
TRAPPC13-205ENST00000504243 RDH12Q96NR8 316 aa2.87□□□□□ -1.95
TRAPPC13-205ENST00000504243 EMC6Q9BV81 110 aa2.87□□□□□ -1.95
TRAPPC13-205ENST00000504243 OSBPL11Q9BXB4 747 aa2.87□□□□□ -1.95
TRAPPC13-205ENST00000504243 TMEM100Q9NV29 134 aa2.87□□□□□ -1.95
TRAPPC13-205ENST00000504243 NDRG2Q9UN36 371 aaKnown RBP2.87□□□□□ -1.95
TRAPPC13-205ENST00000504243 LRRC42Q9Y546 428 aa2.87□□□□□ -1.95
TRAPPC13-205ENST00000504243 IGHV3-72A0A0B4J1Y9 119 aa2.86□□□□□ -1.95
TRAPPC13-205ENST00000504243 LOC100506127A0A0U1RQW1 187 aa2.86□□□□□ -1.95
TRAPPC13-205ENST00000504243 ZNF879B4DU55 563 aa2.86□□□□□ -1.95
TRAPPC13-205ENST00000504243 DFFAO00273 331 aa2.86□□□□□ -1.95
TRAPPC13-205ENST00000504243 MYL12BO14950 172 aa2.86□□□□□ -1.95
TRAPPC13-205ENST00000504243 UPK1BO75841 260 aa2.86□□□□□ -1.95
TRAPPC13-205ENST00000504243 GCGP01275 180 aa2.86□□□□□ -1.95
TRAPPC13-205ENST00000504243 KLK1P06870 262 aa2.86□□□□□ -1.95
TRAPPC13-205ENST00000504243 TACSTD2P09758 323 aa2.86□□□□□ -1.95
TRAPPC13-205ENST00000504243 THRAP10827 490 aa2.86□□□□□ -1.95
TRAPPC13-205ENST00000504243 PRKACBP22694 351 aa2.86□□□□□ -1.95
TRAPPC13-205ENST00000504243 PRSS8Q16651 343 aa2.86□□□□□ -1.95
TRAPPC13-205ENST00000504243 Q3ZCU0 254 aa2.86□□□□□ -1.95
TRAPPC13-205ENST00000504243 C6orf99Q4VX62 202 aa2.86□□□□□ -1.95
TRAPPC13-205ENST00000504243 LIN9Q5TKA1 542 aa2.86□□□□□ -1.95
TRAPPC13-205ENST00000504243 LINC00336Q6ZUF6 198 aa2.86□□□□□ -1.95
TRAPPC13-205ENST00000504243 SLC35D2Q76EJ3 337 aa2.86□□□□□ -1.95
TRAPPC13-205ENST00000504243 MTERF4Q7Z6M4 381 aaKnown RBP2.86□□□□□ -1.95
TRAPPC13-205ENST00000504243 OR6K6Q8NGW6 343 aa2.86□□□□□ -1.95
TRAPPC13-205ENST00000504243 OR1S1Q8NH92 325 aa2.86□□□□□ -1.95
TRAPPC13-205ENST00000504243 RMI2Q96E14 147 aa2.86□□□□□ -1.95
TRAPPC13-205ENST00000504243 TMEM175Q9BSA9 504 aa2.86□□□□□ -1.95
TRAPPC13-205ENST00000504243 ZNF2Q9BSG1 426 aaPredicted RBP2.86□□□□□ -1.95
TRAPPC13-205ENST00000504243 MARVELD1Q9BSK0 173 aa2.86□□□□□ -1.95
TRAPPC13-205ENST00000504243 SFXN3Q9BWM7 321 aa2.86□□□□□ -1.95
TRAPPC13-205ENST00000504243 ZNF442Q9H7R0 627 aa2.86□□□□□ -1.95
TRAPPC13-205ENST00000504243 RBFOX1Q9NWB1 397 aaKnown RBP2.86□□□□□ -1.95
TRAPPC13-205ENST00000504243 OBSCNQ5VST9 7968 aa2.86□□□□□ -1.95
TRAPPC13-205ENST00000504243 A0A0A6YYD5 115 aa2.85□□□□□ -1.95
TRAPPC13-205ENST00000504243 A0A1B0GUH1 482 aa2.85□□□□□ -1.95
TRAPPC13-205ENST00000504243 RPL36A-HNRNPH2H7BZ11 118 aa2.85□□□□□ -1.95
TRAPPC13-205ENST00000504243 SCO1O75880 301 aa2.85□□□□□ -1.95
TRAPPC13-205ENST00000504243 ETHE1O95571 254 aa2.85□□□□□ -1.95
TRAPPC13-205ENST00000504243 YEATS4O95619 227 aa2.85□□□□□ -1.95
TRAPPC13-205ENST00000504243 TRBV12-3P01733 135 aa2.85□□□□□ -1.95
TRAPPC13-205ENST00000504243 DCNP07585 359 aaKnown RBP2.85□□□□□ -1.95
TRAPPC13-205ENST00000504243 PTNP21246 168 aa2.85□□□□□ -1.95
TRAPPC13-205ENST00000504243 UBE2E1P51965 193 aa2.85□□□□□ -1.95
TRAPPC13-205ENST00000504243 RPL18AQ02543 176 aaKnown RBP2.85□□□□□ -1.95
TRAPPC13-205ENST00000504243 HNRNPA1L2Q32P51 320 aaKnown RBP2.85□□□□□ -1.95
TRAPPC13-205ENST00000504243 MFSD14CQ5VZR4 134 aa2.85□□□□□ -1.95
TRAPPC13-205ENST00000504243 DRAM1Q8N682 238 aa2.85□□□□□ -1.95
TRAPPC13-205ENST00000504243 OR4M2Q8NGB6 313 aa2.85□□□□□ -1.95
TRAPPC13-205ENST00000504243 ENKURQ8TC29 256 aa2.85□□□□□ -1.95
TRAPPC13-205ENST00000504243 MITD1Q8WV92 249 aa2.85□□□□□ -1.95
TRAPPC13-205ENST00000504243 OR8D1Q8WZ84 308 aa2.85□□□□□ -1.95
TRAPPC13-205ENST00000504243 TFGQ92734 400 aaPredicted RBP2.85□□□□□ -1.95
TRAPPC13-205ENST00000504243 CCDC94Q9BW85 323 aaPredicted RBP2.85□□□□□ -1.95
TRAPPC13-205ENST00000504243 ZNF717Q9BY31 904 aaPredicted RBP2.85□□□□□ -1.95
TRAPPC13-205ENST00000504243 ZNF257Q9Y2Q1 563 aa2.85□□□□□ -1.95
TRAPPC13-205ENST00000504243 OR51B2Q9Y5P1 312 aa2.85□□□□□ -1.95
TRAPPC13-205ENST00000504243 DOCK8Q8NF50 2099 aa2.84□□□□□ -1.95
TRAPPC13-205ENST00000504243 TUBGCP6Q96RT7 1819 aa2.84□□□□□ -1.95
TRAPPC13-205ENST00000504243 A0A0B4J2E0 115 aa2.84□□□□□ -1.95
TRAPPC13-205ENST00000504243 TTC4O95801 387 aa2.84□□□□□ -1.95
TRAPPC13-205ENST00000504243 CSKP41240 450 aa2.84□□□□□ -1.95
TRAPPC13-205ENST00000504243 MTPNP58546 118 aa2.84□□□□□ -1.95
TRAPPC13-205ENST00000504243 SLC35A1P78382 337 aa2.84□□□□□ -1.95
TRAPPC13-205ENST00000504243 SLC35B1P78383 322 aa2.84□□□□□ -1.95
TRAPPC13-205ENST00000504243 ATP6V1FQ16864 119 aa2.84□□□□□ -1.95
TRAPPC13-205ENST00000504243 C6orf183Q5T699 404 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms