RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 PPIAL4FP0DN26 164 aa12.87□□□□□ -0.35
NUP50-219ENST00000497960 CPT2P23786 658 aa12.87□□□□□ -0.35
NUP50-219ENST00000497960 ZFP36P26651 326 aaKnown RBP12.87□□□□□ -0.35
NUP50-219ENST00000497960 DCKP27707 260 aa12.87□□□□□ -0.35
NUP50-219ENST00000497960 DDOSTP39656 456 aa12.87□□□□□ -0.35
NUP50-219ENST00000497960 CSNK2BP67870 215 aa12.87□□□□□ -0.35
NUP50-219ENST00000497960 MFGE8Q08431 387 aaPredicted RBP12.87□□□□□ -0.35
NUP50-219ENST00000497960 MZT1Q08AG7 82 aa12.87□□□□□ -0.35
NUP50-219ENST00000497960 ST3GAL4Q11206 333 aa12.87□□□□□ -0.35
NUP50-219ENST00000497960 MAB21L1Q13394 359 aa12.87□□□□□ -0.35
NUP50-219ENST00000497960 TIGD6Q17RP2 521 aa12.87□□□□□ -0.35
NUP50-219ENST00000497960 KRTAP24-1Q3LI83 254 aa12.87□□□□□ -0.35
NUP50-219ENST00000497960 CDONQ4KMG0 1287 aa12.87□□□□□ -0.35
NUP50-219ENST00000497960 ESCO2Q56NI9 601 aa12.87□□□□□ -0.35
NUP50-219ENST00000497960 LHFPL3Q86UP9 236 aa12.87□□□□□ -0.35
NUP50-219ENST00000497960 PHC2Q8IXK0 858 aa12.87□□□□□ -0.35
NUP50-219ENST00000497960 SPERTQ8NA61 448 aa12.87□□□□□ -0.35
NUP50-219ENST00000497960 OR56B2PQ8NGI1 322 aa12.87□□□□□ -0.35
NUP50-219ENST00000497960 OR52H1Q8NGJ2 320 aa12.87□□□□□ -0.35
NUP50-219ENST00000497960 TMEM80Q96HE8 168 aa12.87□□□□□ -0.35
NUP50-219ENST00000497960 C4orf36Q96KX1 117 aa12.87□□□□□ -0.35
NUP50-219ENST00000497960 ADAT1Q9BUB4 502 aaKnown RBP12.87□□□□□ -0.35
NUP50-219ENST00000497960 JAM3Q9BX67 310 aa12.87□□□□□ -0.35
NUP50-219ENST00000497960 TMPRSS13Q9BYE2 586 aa12.87□□□□□ -0.35
NUP50-219ENST00000497960 OR10A2Q9H208 303 aa12.87□□□□□ -0.35
NUP50-219ENST00000497960 MOB1AQ9H8S9 216 aa12.87□□□□□ -0.35
NUP50-219ENST00000497960 FN3KRPQ9HA64 309 aa12.87□□□□□ -0.35
NUP50-219ENST00000497960 CHCHD3Q9NX63 227 aaKnown RBP12.87□□□□□ -0.35
NUP50-219ENST00000497960 ERVK13-1Q9NX77 482 aa12.87□□□□□ -0.35
NUP50-219ENST00000497960 PSORS1C1Q9UIG5 152 aa12.87□□□□□ -0.35
NUP50-219ENST00000497960 BLOC1S6Q9UL45 172 aa12.87□□□□□ -0.35
NUP50-219ENST00000497960 DIMT1Q9UNQ2 313 aaKnown RBP12.87□□□□□ -0.35
NUP50-219ENST00000497960 TPRKBQ9Y3C4 175 aa12.87□□□□□ -0.35
NUP50-219ENST00000497960 TMEM269A0A1B0GVZ9 245 aa12.86□□□□□ -0.35
NUP50-219ENST00000497960 ANKRD30BLA7E2S9 258 aa12.86□□□□□ -0.35
NUP50-219ENST00000497960 CEACAM18A8MTB9 384 aa12.86□□□□□ -0.35
NUP50-219ENST00000497960 J3QLW9 94 aa12.86□□□□□ -0.35
NUP50-219ENST00000497960 MYL12BO14950 172 aa12.86□□□□□ -0.35
NUP50-219ENST00000497960 DENRO43583 198 aaKnown RBP12.86□□□□□ -0.35
NUP50-219ENST00000497960 ZNF205O95201 554 aa12.86□□□□□ -0.35
NUP50-219ENST00000497960 AVPP01185 164 aa12.86□□□□□ -0.35
NUP50-219ENST00000497960 CCDC159P0C7I6 412 aa12.86□□□□□ -0.35
NUP50-219ENST00000497960 RPS2P15880 293 aaKnown RBP12.86□□□□□ -0.35
NUP50-219ENST00000497960 ZNF19P17023 458 aa12.86□□□□□ -0.35
NUP50-219ENST00000497960 ANOS1P23352 680 aa12.86□□□□□ -0.35
NUP50-219ENST00000497960 CFL1P23528 166 aaKnown RBP12.86□□□□□ -0.35
NUP50-219ENST00000497960 DCTDP32321 178 aa12.86□□□□□ -0.35
NUP50-219ENST00000497960 PMELP40967 661 aa12.86□□□□□ -0.35
NUP50-219ENST00000497960 SRSF2Q01130 221 aaKnown RBP12.86□□□□□ -0.35
NUP50-219ENST00000497960 BCL2L15Q5TBC7 163 aa12.86□□□□□ -0.35
NUP50-219ENST00000497960 PRAMEF6Q5VXH4 476 aa12.86□□□□□ -0.35
NUP50-219ENST00000497960 C1QL2Q7Z5L3 287 aa12.86□□□□□ -0.35
NUP50-219ENST00000497960 COMMD2Q86X83 199 aa12.86□□□□□ -0.35
NUP50-219ENST00000497960 KLBQ86Z14 1044 aa12.86□□□□□ -0.35
NUP50-219ENST00000497960 OR8B12Q8NGG6 310 aa12.86□□□□□ -0.35
NUP50-219ENST00000497960 NANPQ8TBE9 248 aa12.86□□□□□ -0.35
NUP50-219ENST00000497960 Q8TCH9 128 aa12.86□□□□□ -0.35
NUP50-219ENST00000497960 SPSB4Q96A44 273 aa12.86□□□□□ -0.35
NUP50-219ENST00000497960 REEP6Q96HR9 211 aa12.86□□□□□ -0.35
NUP50-219ENST00000497960 TMEM165Q9HC07 324 aa12.86□□□□□ -0.35
NUP50-219ENST00000497960 UFSP2Q9NUQ7 469 aa12.86□□□□□ -0.35
NUP50-219ENST00000497960 FAM206AQ9NX38 181 aa12.86□□□□□ -0.35
NUP50-219ENST00000497960 MIOXQ9UGB7 285 aa12.86□□□□□ -0.35
NUP50-219ENST00000497960 OR5V1Q9UGF6 321 aa12.86□□□□□ -0.35
NUP50-219ENST00000497960 LRCH1Q9Y2L9 728 aa12.86□□□□□ -0.35
NUP50-219ENST00000497960 PPIAL4AQ9Y536 164 aa12.86□□□□□ -0.35
NUP50-219ENST00000497960 R4GMQ9 66 aa12.86□□□□□ -0.35
NUP50-219ENST00000497960 PTGES3LE9PB15 166 aa12.85□□□□□ -0.35
NUP50-219ENST00000497960 F5H0A9 414 aaPredicted RBP12.85□□□□□ -0.35
NUP50-219ENST00000497960 FSTL3O95633 263 aa12.85□□□□□ -0.35
NUP50-219ENST00000497960 WNT2P09544 360 aa12.85□□□□□ -0.35
NUP50-219ENST00000497960 EPHA1P21709 976 aa12.85□□□□□ -0.35
NUP50-219ENST00000497960 ETV1P50549 477 aa12.85□□□□□ -0.35
NUP50-219ENST00000497960 OR12D2P58182 307 aa12.85□□□□□ -0.35
NUP50-219ENST00000497960 RBM48Q5RL73 367 aaKnown RBP12.85□□□□□ -0.35
NUP50-219ENST00000497960 ZNF684Q5T5D7 378 aa12.85□□□□□ -0.35
NUP50-219ENST00000497960 C1orf229Q6ZS94 237 aaPredicted RBP12.85□□□□□ -0.35
NUP50-219ENST00000497960 NLRC3Q7RTR2 1065 aa12.85□□□□□ -0.35
NUP50-219ENST00000497960 PLPP7Q8NBV4 271 aa12.85□□□□□ -0.35
NUP50-219ENST00000497960 ZNF418Q8TF45 676 aaPredicted RBP12.85□□□□□ -0.35
NUP50-219ENST00000497960 MYDGFQ969H8 173 aa12.85□□□□□ -0.35
NUP50-219ENST00000497960 SGK3Q96BR1 496 aa12.85□□□□□ -0.35
NUP50-219ENST00000497960 RGCCQ9H4X1 137 aa12.85□□□□□ -0.35
NUP50-219ENST00000497960 FKBP14Q9NWM8 211 aa12.85□□□□□ -0.35
NUP50-219ENST00000497960 C14orf119Q9NWQ9 140 aa12.85□□□□□ -0.35
NUP50-219ENST00000497960 POLR3KQ9Y2Y1 108 aaPredicted RBP12.85□□□□□ -0.35
NUP50-219ENST00000497960 PCDHGB5Q9Y5G0 923 aa12.85□□□□□ -0.35
NUP50-219ENST00000497960 A0A0A6YYJ9 748 aa12.84□□□□□ -0.35
NUP50-219ENST00000497960 A8MXK9 166 aa12.84□□□□□ -0.35
NUP50-219ENST00000497960 SRSF10O75494 262 aaKnown RBP12.84□□□□□ -0.35
NUP50-219ENST00000497960 CDK1P06493 297 aa12.84□□□□□ -0.35
NUP50-219ENST00000497960 HTR1AP08908 422 aa12.84□□□□□ -0.35
NUP50-219ENST00000497960 LIMS3P0CW19 117 aa12.84□□□□□ -0.35
NUP50-219ENST00000497960 LIMS4P0CW20 117 aa12.84□□□□□ -0.35
NUP50-219ENST00000497960 ADRA2CP18825 462 aa12.84□□□□□ -0.35
NUP50-219ENST00000497960 PSMB10P40306 273 aa12.84□□□□□ -0.35
NUP50-219ENST00000497960 SEC61A1P61619 476 aaKnown RBP12.84□□□□□ -0.35
NUP50-219ENST00000497960 FAM3AP98173 230 aa12.84□□□□□ -0.35
NUP50-219ENST00000497960 MPPED2Q15777 294 aa12.84□□□□□ -0.35
NUP50-219ENST00000497960 ZNF404Q494X3 552 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms