RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 RBMS3Q6XE24 437 aaKnown RBP27.61■■■□□ 2.01
CBX4-203ENST00000494546 ZDHHC23Q8IYP9 409 aa27.61■■■□□ 2.01
CBX4-203ENST00000494546 BCL6BQ8N143 479 aaPredicted RBP27.61■■■□□ 2.01
CBX4-203ENST00000494546 SIGLECL1Q8N7X8 197 aa27.61■■■□□ 2.01
CBX4-203ENST00000494546 RNF170Q96K19 258 aa27.61■■■□□ 2.01
CBX4-203ENST00000494546 FAM71F1Q96KD3 344 aaPredicted RBP27.61■■■□□ 2.01
CBX4-203ENST00000494546 APOL4Q9BPW4 351 aa27.61■■■□□ 2.01
CBX4-203ENST00000494546 OSBPL10Q9BXB5 764 aa27.61■■■□□ 2.01
CBX4-203ENST00000494546 GABARAPL3Q9BY60 117 aa27.61■■■□□ 2.01
CBX4-203ENST00000494546 TLNRD1Q9H1K6 362 aa27.61■■■□□ 2.01
CBX4-203ENST00000494546 SMURF1Q9HCE7 757 aa27.61■■■□□ 2.01
CBX4-203ENST00000494546 GTF2A1LQ9UNN4 478 aa27.61■■■□□ 2.01
CBX4-203ENST00000494546 DOCK11Q5JSL3 2073 aa27.6■■■□□ 2.01
CBX4-203ENST00000494546 ZNF670-ZNF695F2Z2N8 137 aa27.6■■■□□ 2.01
CBX4-203ENST00000494546 MAGEB4O15481 346 aaPredicted RBP27.6■■■□□ 2.01
CBX4-203ENST00000494546 IGHV4-38-2P0DP08 117 aa27.6■■■□□ 2.01
CBX4-203ENST00000494546 ACTR3P61158 418 aa27.6■■■□□ 2.01
CBX4-203ENST00000494546 ACTG1P63261 375 aa27.6■■■□□ 2.01
CBX4-203ENST00000494546 MFGE8Q08431 387 aaPredicted RBP27.6■■■□□ 2.01
CBX4-203ENST00000494546 KPNB1Q14974 876 aaKnown RBP27.6■■■□□ 2.01
CBX4-203ENST00000494546 MICBQ29980 383 aa27.6■■■□□ 2.01
CBX4-203ENST00000494546 CD276Q5ZPR3 534 aa27.6■■■□□ 2.01
CBX4-203ENST00000494546 OR51G2Q8NGK0 314 aa27.6■■■□□ 2.01
CBX4-203ENST00000494546 OR51E1Q8TCB6 317 aa27.6■■■□□ 2.01
CBX4-203ENST00000494546 RPL3LQ92901 407 aaKnown RBP27.6■■■□□ 2.01
CBX4-203ENST00000494546 PPP1R14AQ96A00 147 aa27.6■■■□□ 2.01
CBX4-203ENST00000494546 UPRTQ96BW1 309 aa27.6■■■□□ 2.01
CBX4-203ENST00000494546 HIST1H2AAQ96QV6 131 aa27.6■■■□□ 2.01
CBX4-203ENST00000494546 MNTQ99583 582 aa27.6■■■□□ 2.01
CBX4-203ENST00000494546 RBM4BQ9BQ04 359 aaKnown RBP27.6■■■□□ 2.01
CBX4-203ENST00000494546 MS4A7Q9GZW8 240 aaPredicted RBP27.6■■■□□ 2.01
CBX4-203ENST00000494546 ESM1Q9NQ30 184 aa27.6■■■□□ 2.01
CBX4-203ENST00000494546 GPR84Q9NQS5 396 aa27.6■■■□□ 2.01
CBX4-203ENST00000494546 CLN6Q9NWW5 311 aa27.6■■■□□ 2.01
CBX4-203ENST00000494546 ZNF816-ZNF321PA0A0X1KG74 233 aa27.59■■■□□ 2.01
CBX4-203ENST00000494546 TMEM210A6NLX4 147 aa27.59■■■□□ 2.01
CBX4-203ENST00000494546 TMPRSS2O15393 492 aa27.59■■■□□ 2.01
CBX4-203ENST00000494546 GMFBP60983 142 aa27.59■■■□□ 2.01
CBX4-203ENST00000494546 FAM216AQ8WUB2 273 aa27.59■■■□□ 2.01
CBX4-203ENST00000494546 HPSE2Q8WWQ2 592 aa27.59■■■□□ 2.01
CBX4-203ENST00000494546 FGF23Q9GZV9 251 aaPredicted RBP27.59■■■□□ 2.01
CBX4-203ENST00000494546 HAO2Q9NYQ3 351 aa27.59■■■□□ 2.01
CBX4-203ENST00000494546 NUFIP1Q9UHK0 495 aaKnown RBP27.59■■■□□ 2.01
CBX4-203ENST00000494546 TRAV40A0A0B4J280 105 aa27.58■■■□□ 2.01
CBX4-203ENST00000494546 MUC1P15941 1255 aaPredicted RBP27.58■■■□□ 2.01
CBX4-203ENST00000494546 FGF12P61328 243 aa27.58■■■□□ 2.01
CBX4-203ENST00000494546 THAP5Q7Z6K1 395 aa27.58■■■□□ 2.01
CBX4-203ENST00000494546 ZDHHC22Q8N966 263 aa27.58■■■□□ 2.01
CBX4-203ENST00000494546 SEH1LQ96EE3 360 aa27.58■■■□□ 2.01
CBX4-203ENST00000494546 WARS2Q9UGM6 360 aaKnown RBP27.58■■■□□ 2.01
CBX4-203ENST00000494546 LOC110117498-PIK3R3F6TDL0 507 aa27.57■■■□□ 2
CBX4-203ENST00000494546 ELF3P78545 371 aaPredicted RBP27.57■■■□□ 2
CBX4-203ENST00000494546 PLEKHG7Q6ZR37 379 aa27.57■■■□□ 2
CBX4-203ENST00000494546 SCCPDHQ8NBX0 429 aa27.57■■■□□ 2
CBX4-203ENST00000494546 TBX5Q99593 518 aa27.57■■■□□ 2
CBX4-203ENST00000494546 CCL13Q99616 98 aa27.57■■■□□ 2
CBX4-203ENST00000494546 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP27.56■■■□□ 2
CBX4-203ENST00000494546 DVL1O14640 695 aa27.56■■■□□ 2
CBX4-203ENST00000494546 CFHR2P36980 270 aa27.56■■■□□ 2
CBX4-203ENST00000494546 GPM6AP51674 278 aa27.56■■■□□ 2
CBX4-203ENST00000494546 RIPPLY1Q0D2K3 151 aa27.56■■■□□ 2
CBX4-203ENST00000494546 CEP78Q5JTW2 689 aa27.56■■■□□ 2
CBX4-203ENST00000494546 KAAG1Q9UBP8 84 aa27.56■■■□□ 2
CBX4-203ENST00000494546 R4GMQ9 66 aa27.56■■■□□ 2
CBX4-203ENST00000494546 SRRM5B3KS81 715 aa27.55■■■□□ 2
CBX4-203ENST00000494546 H3BNX3 289 aa27.55■■■□□ 2
CBX4-203ENST00000494546 APOL3O95236 402 aa27.55■■■□□ 2
CBX4-203ENST00000494546 ATP6V1B1P15313 513 aa27.55■■■□□ 2
CBX4-203ENST00000494546 HTR1FP30939 366 aa27.55■■■□□ 2
CBX4-203ENST00000494546 EGR3Q06889 387 aa27.55■■■□□ 2
CBX4-203ENST00000494546 DMRTC1Q5HYR2 192 aa27.55■■■□□ 2
CBX4-203ENST00000494546 WDR38Q5JTN6 314 aa27.55■■■□□ 2
CBX4-203ENST00000494546 BCL2L15Q5TBC7 163 aa27.55■■■□□ 2
CBX4-203ENST00000494546 DOK3Q7L591 496 aa27.55■■■□□ 2
CBX4-203ENST00000494546 OR8J1Q8NGP2 316 aa27.55■■■□□ 2
CBX4-203ENST00000494546 OR10Z1Q8NGY1 313 aa27.55■■■□□ 2
CBX4-203ENST00000494546 ST8SIA4Q92187 359 aa27.55■■■□□ 2
CBX4-203ENST00000494546 MRM2Q9UI43 246 aaKnown RBP27.55■■■□□ 2
CBX4-203ENST00000494546 PIGLQ9Y2B2 252 aa27.55■■■□□ 2
CBX4-203ENST00000494546 A0A1B0GW55 424 aa27.54■■■□□ 2
CBX4-203ENST00000494546 SRSF10O75494 262 aaKnown RBP27.54■■■□□ 2
CBX4-203ENST00000494546 FCN3O75636 299 aa27.54■■■□□ 2
CBX4-203ENST00000494546 IGLV3-1P01715 115 aa27.54■■■□□ 2
CBX4-203ENST00000494546 TTRP02766 147 aa27.54■■■□□ 2
CBX4-203ENST00000494546 DUX4L2P0CJ85 424 aa27.54■■■□□ 2
CBX4-203ENST00000494546 DUX4L3P0CJ86 424 aa27.54■■■□□ 2
CBX4-203ENST00000494546 DUX4L4P0CJ87 422 aa27.54■■■□□ 2
CBX4-203ENST00000494546 DUX4L5P0CJ88 424 aa27.54■■■□□ 2
CBX4-203ENST00000494546 DUX4L6P0CJ89 424 aa27.54■■■□□ 2
CBX4-203ENST00000494546 DUX4L7P0CJ90 424 aa27.54■■■□□ 2
CBX4-203ENST00000494546 FAHP16930 419 aa27.54■■■□□ 2
CBX4-203ENST00000494546 FAM76BQ5HYJ3 339 aa27.54■■■□□ 2
CBX4-203ENST00000494546 DUX4L9Q6RFH8 374 aaPredicted RBP27.54■■■□□ 2
CBX4-203ENST00000494546 C12orf54Q6X4T0 127 aa27.54■■■□□ 2
CBX4-203ENST00000494546 MOB3CQ70IA8 216 aa27.54■■■□□ 2
CBX4-203ENST00000494546 SSX6Q7RTT6 188 aa27.54■■■□□ 2
CBX4-203ENST00000494546 ZNF48Q96MX3 618 aaPredicted RBP27.54■■■□□ 2
CBX4-203ENST00000494546 PCGF1Q9BSM1 259 aa27.54■■■□□ 2
CBX4-203ENST00000494546 WDR13Q9H1Z4 485 aa27.54■■■□□ 2
CBX4-203ENST00000494546 MOB1AQ9H8S9 216 aa27.54■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms