RNA–Protein interactions for RNA: ENST00000493732.5

NPHP3-209, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,933 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-209ENST00000493732 A0A0A6YYD4 124 aa8.46□□□□□ -1.05
NPHP3-209ENST00000493732 MFSD2BA6NFX1 497 aa8.46□□□□□ -1.05
NPHP3-209ENST00000493732 DBX1A6NMT0 343 aa8.46□□□□□ -1.05
NPHP3-209ENST00000493732 OR2AT4A6NND4 320 aa8.46□□□□□ -1.05
NPHP3-209ENST00000493732 SMAD9O15198 467 aaKnown RBP8.46□□□□□ -1.05
NPHP3-209ENST00000493732 BCL2L11O43521 198 aa8.46□□□□□ -1.05
NPHP3-209ENST00000493732 FCGR2AP12318 317 aa8.46□□□□□ -1.05
NPHP3-209ENST00000493732 ZP3P21754 424 aa8.46□□□□□ -1.05
NPHP3-209ENST00000493732 BLVRBP30043 206 aaPredicted RBP8.46□□□□□ -1.05
NPHP3-209ENST00000493732 CYB561P49447 251 aa8.46□□□□□ -1.05
NPHP3-209ENST00000493732 B3GALT5-AS1P59052 145 aa8.46□□□□□ -1.05
NPHP3-209ENST00000493732 SIGLEC14Q08ET2 396 aa8.46□□□□□ -1.05
NPHP3-209ENST00000493732 MICBQ29980 383 aa8.46□□□□□ -1.05
NPHP3-209ENST00000493732 NRN1LQ496H8 165 aa8.46□□□□□ -1.05
NPHP3-209ENST00000493732 PHYHD1Q5SRE7 291 aa8.46□□□□□ -1.05
NPHP3-209ENST00000493732 SFRP5Q5T4F7 317 aa8.46□□□□□ -1.05
NPHP3-209ENST00000493732 ZNF660Q6AZW8 331 aaPredicted RBP8.46□□□□□ -1.05
NPHP3-209ENST00000493732 JMJD6Q6NYC1 403 aaPredicted RBP8.46□□□□□ -1.05
NPHP3-209ENST00000493732 ALKAL2Q6UX46 152 aa8.46□□□□□ -1.05
NPHP3-209ENST00000493732 Q7L0L9 218 aa8.46□□□□□ -1.05
NPHP3-209ENST00000493732 AAED1Q7RTV5 226 aa8.46□□□□□ -1.05
NPHP3-209ENST00000493732 PPP1R32Q7Z5V6 425 aa8.46□□□□□ -1.05
NPHP3-209ENST00000493732 PEG10Q86TG7 708 aaKnown RBP8.46□□□□□ -1.05
NPHP3-209ENST00000493732 LRRC18Q8N456 261 aa8.46□□□□□ -1.05
NPHP3-209ENST00000493732 OR2I1PQ8NGU4 316 aa8.46□□□□□ -1.05
NPHP3-209ENST00000493732 PPP1R1CQ8WVI7 109 aa8.46□□□□□ -1.05
NPHP3-209ENST00000493732 CPNE4Q96A23 557 aaPredicted RBP8.46□□□□□ -1.05
NPHP3-209ENST00000493732 POM121Q96HA1 1249 aa8.46□□□□□ -1.05
NPHP3-209ENST00000493732 ARHGAP5-AS1Q96IT6 56 aa8.46□□□□□ -1.05
NPHP3-209ENST00000493732 LYZL4Q96KX0 146 aa8.46□□□□□ -1.05
NPHP3-209ENST00000493732 SPACA5Q96QH8 159 aa8.46□□□□□ -1.05
NPHP3-209ENST00000493732 TAAR9Q96RI9 348 aa8.46□□□□□ -1.05
NPHP3-209ENST00000493732 UCN2Q96RP3 112 aa8.46□□□□□ -1.05
NPHP3-209ENST00000493732 DDA1Q9BW61 102 aa8.46□□□□□ -1.05
NPHP3-209ENST00000493732 BANF2Q9H503 90 aa8.46□□□□□ -1.05
NPHP3-209ENST00000493732 RAB18Q9NP72 206 aa8.46□□□□□ -1.05
NPHP3-209ENST00000493732 IGHV3-15A0A0B4J1V0 119 aa8.46□□□□□ -1.06
NPHP3-209ENST00000493732 OR5H15A6NDH6 313 aa8.46□□□□□ -1.06
NPHP3-209ENST00000493732 FIGNL2A6NMB9 653 aa8.46□□□□□ -1.06
NPHP3-209ENST00000493732 PATE3B3GLJ2 98 aa8.46□□□□□ -1.06
NPHP3-209ENST00000493732 STMND1H3BQB6 276 aa8.46□□□□□ -1.06
NPHP3-209ENST00000493732 GDF9O60383 454 aa8.46□□□□□ -1.06
NPHP3-209ENST00000493732 TCN2P20062 427 aa8.46□□□□□ -1.06
NPHP3-209ENST00000493732 KLK2P20151 261 aa8.46□□□□□ -1.06
NPHP3-209ENST00000493732 CRYGSP22914 178 aa8.46□□□□□ -1.06
NPHP3-209ENST00000493732 PSMB6P28072 239 aa8.46□□□□□ -1.06
NPHP3-209ENST00000493732 NUP62P37198 522 aaPredicted RBP8.46□□□□□ -1.06
NPHP3-209ENST00000493732 STARP49675 285 aa8.46□□□□□ -1.06
NPHP3-209ENST00000493732 STK11Q15831 433 aa8.46□□□□□ -1.06
NPHP3-209ENST00000493732 ACER2Q5QJU3 275 aa8.46□□□□□ -1.06
NPHP3-209ENST00000493732 DBX2Q6ZNG2 339 aa8.46□□□□□ -1.06
NPHP3-209ENST00000493732 GALNTL5Q7Z4T8 443 aa8.46□□□□□ -1.06
NPHP3-209ENST00000493732 OR1F12Q8NHA8 337 aa8.46□□□□□ -1.06
NPHP3-209ENST00000493732 OR2V1Q8NHB1 315 aa8.46□□□□□ -1.06
NPHP3-209ENST00000493732 MARCH1Q8TCQ1 289 aa8.46□□□□□ -1.06
NPHP3-209ENST00000493732 RHBDD1Q8TEB9 315 aa8.46□□□□□ -1.06
NPHP3-209ENST00000493732 ST8SIA2Q92186 375 aa8.46□□□□□ -1.06
NPHP3-209ENST00000493732 EMG1Q92979 244 aaKnown RBP8.46□□□□□ -1.06
NPHP3-209ENST00000493732 MRGPRFQ96AM1 343 aa8.46□□□□□ -1.06
NPHP3-209ENST00000493732 METTL9Q9H1A3 318 aa8.46□□□□□ -1.06
NPHP3-209ENST00000493732 TMEM38BQ9NVV0 291 aa8.46□□□□□ -1.06
NPHP3-209ENST00000493732 BOKQ9UMX3 212 aaPredicted RBP8.46□□□□□ -1.06
NPHP3-209ENST00000493732 TIMM10BQ9Y5J6 103 aa8.46□□□□□ -1.06
NPHP3-209ENST00000493732 PHF3Q92576 2039 aaKnown RBP8.45□□□□□ -1.06
NPHP3-209ENST00000493732 LOC100509620A0A075B734 347 aa8.45□□□□□ -1.06
NPHP3-209ENST00000493732 C5orf51A6NDU8 294 aa8.45□□□□□ -1.06
NPHP3-209ENST00000493732 OR6C6A6NF89 314 aa8.45□□□□□ -1.06
NPHP3-209ENST00000493732 FOXI3A8MTJ6 420 aaPredicted RBP8.45□□□□□ -1.06
NPHP3-209ENST00000493732 SYNGR3O43761 229 aa8.45□□□□□ -1.06
NPHP3-209ENST00000493732 FARS2O95363 451 aaKnown RBP8.45□□□□□ -1.06
NPHP3-209ENST00000493732 SFT2D2O95562 160 aa8.45□□□□□ -1.06
NPHP3-209ENST00000493732 CSTBP04080 98 aaKnown RBP8.45□□□□□ -1.06
NPHP3-209ENST00000493732 PET100P0DJ07 73 aa8.45□□□□□ -1.06
NPHP3-209ENST00000493732 FAHP16930 419 aa8.45□□□□□ -1.06
NPHP3-209ENST00000493732 OTX2P32243 289 aa8.45□□□□□ -1.06
NPHP3-209ENST00000493732 DLSTP36957 453 aa8.45□□□□□ -1.06
NPHP3-209ENST00000493732 SNU13P55769 128 aaKnown RBP8.45□□□□□ -1.06
NPHP3-209ENST00000493732 UBE2V2Q15819 145 aa8.45□□□□□ -1.06
NPHP3-209ENST00000493732 CHRFAM7AQ494W8 412 aa8.45□□□□□ -1.06
NPHP3-209ENST00000493732 ABLIM2Q6H8Q1 611 aa8.45□□□□□ -1.06
NPHP3-209ENST00000493732 PLXDC2Q6UX71 529 aa8.45□□□□□ -1.06
NPHP3-209ENST00000493732 C17orf107Q6ZR85 190 aa8.45□□□□□ -1.06
NPHP3-209ENST00000493732 LHFPL2Q6ZUX7 228 aa8.45□□□□□ -1.06
NPHP3-209ENST00000493732 LHFPL1Q86WI0 220 aa8.45□□□□□ -1.06
NPHP3-209ENST00000493732 SULF2Q8IWU5 870 aa8.45□□□□□ -1.06
NPHP3-209ENST00000493732 CCDC36Q8IYA8 594 aa8.45□□□□□ -1.06
NPHP3-209ENST00000493732 ZNF100Q8IYN0 542 aa8.45□□□□□ -1.06
NPHP3-209ENST00000493732 CSNK2A3Q8NEV1 391 aa8.45□□□□□ -1.06
NPHP3-209ENST00000493732 OR5AP2Q8NGF4 316 aa8.45□□□□□ -1.06
NPHP3-209ENST00000493732 CASTOR1Q8WTX7 329 aa8.45□□□□□ -1.06
NPHP3-209ENST00000493732 ST8SIA4Q92187 359 aa8.45□□□□□ -1.06
NPHP3-209ENST00000493732 FBXO17Q96EF6 278 aa8.45□□□□□ -1.06
NPHP3-209ENST00000493732 MRPS24Q96EL2 167 aaKnown RBP8.45□□□□□ -1.06
NPHP3-209ENST00000493732 VRK1Q99986 396 aaPredicted RBP8.45□□□□□ -1.06
NPHP3-209ENST00000493732 SOX7Q9BT81 388 aa8.45□□□□□ -1.06
NPHP3-209ENST00000493732 PECRQ9BY49 303 aa8.45□□□□□ -1.06
NPHP3-209ENST00000493732 SRXN1Q9BYN0 137 aa8.45□□□□□ -1.06
NPHP3-209ENST00000493732 PPA2Q9H2U2 334 aa8.45□□□□□ -1.06
NPHP3-209ENST00000493732 CHMP1AQ9HD42 196 aaPredicted RBP8.45□□□□□ -1.06
NPHP3-209ENST00000493732 ABI3Q9P2A4 366 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms