RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-223ENST00000493695 KLHL40Q2TBA0 621 aa1.76□□□□□ -2.13
SMC4-223ENST00000493695 SP6Q3SY56 376 aa1.76□□□□□ -2.13
SMC4-223ENST00000493695 C6orf99Q4VX62 202 aa1.76□□□□□ -2.13
SMC4-223ENST00000493695 LUZP6Q538Z0 58 aa1.76□□□□□ -2.13
SMC4-223ENST00000493695 PIP5KL1Q5T9C9 394 aa1.76□□□□□ -2.13
SMC4-223ENST00000493695 PRSS54Q6PEW0 395 aa1.76□□□□□ -2.13
SMC4-223ENST00000493695 DEGS2Q6QHC5 323 aa1.76□□□□□ -2.13
SMC4-223ENST00000493695 KIF2BQ8N4N8 673 aa1.76□□□□□ -2.13
SMC4-223ENST00000493695 LINC00304Q8N9R0 145 aa1.76□□□□□ -2.13
SMC4-223ENST00000493695 OR52N1Q8NH53 320 aa1.76□□□□□ -2.13
SMC4-223ENST00000493695 S100PBPQ96BU1 408 aa1.76□□□□□ -2.13
SMC4-223ENST00000493695 RCN3Q96D15 328 aa1.76□□□□□ -2.13
SMC4-223ENST00000493695 RDH12Q96NR8 316 aa1.76□□□□□ -2.13
SMC4-223ENST00000493695 IQCGQ9H095 443 aaKnown RBP1.76□□□□□ -2.13
SMC4-223ENST00000493695 OR51B5Q9H339 312 aa1.76□□□□□ -2.13
SMC4-223ENST00000493695 CLSTN2Q9H4D0 955 aa1.76□□□□□ -2.13
SMC4-223ENST00000493695 HEBP1Q9NRV9 189 aa1.76□□□□□ -2.13
SMC4-223ENST00000493695 PSME2Q9UL46 239 aa1.76□□□□□ -2.13
SMC4-223ENST00000493695 OR51B2Q9Y5P1 312 aa1.76□□□□□ -2.13
SMC4-223ENST00000493695 KIAA1671Q9BY89 1806 aa1.75□□□□□ -2.13
SMC4-223ENST00000493695 NID2Q14112 1375 aa1.75□□□□□ -2.13
SMC4-223ENST00000493695 H3BN98 237 aa1.75□□□□□ -2.13
SMC4-223ENST00000493695 MANBAO00462 879 aa1.75□□□□□ -2.13
SMC4-223ENST00000493695 OR7C2O60412 319 aa1.75□□□□□ -2.13
SMC4-223ENST00000493695 MPDU1O75352 247 aa1.75□□□□□ -2.13
SMC4-223ENST00000493695 FARS2O95363 451 aaKnown RBP1.75□□□□□ -2.13
SMC4-223ENST00000493695 TUBG1P23258 451 aa1.75□□□□□ -2.13
SMC4-223ENST00000493695 APLNRP35414 380 aa1.75□□□□□ -2.13
SMC4-223ENST00000493695 MPV17P39210 176 aa1.75□□□□□ -2.13
SMC4-223ENST00000493695 IDH2P48735 452 aaKnown RBP1.75□□□□□ -2.13
SMC4-223ENST00000493695 GDI2P50395 445 aaKnown RBP1.75□□□□□ -2.13
SMC4-223ENST00000493695 ATP6V0D1P61421 351 aa1.75□□□□□ -2.13
SMC4-223ENST00000493695 TPRG1LQ5T0D9 272 aa1.75□□□□□ -2.13
SMC4-223ENST00000493695 OR2T5Q6IEZ7 315 aa1.75□□□□□ -2.13
SMC4-223ENST00000493695 MRPL21Q7Z2W9 205 aaKnown RBP1.75□□□□□ -2.13
SMC4-223ENST00000493695 TMCO2Q7Z6W1 182 aaPredicted RBP1.75□□□□□ -2.13
SMC4-223ENST00000493695 SLC25A29Q8N8R3 303 aa1.75□□□□□ -2.13
SMC4-223ENST00000493695 BBOF1Q8ND07 529 aa1.75□□□□□ -2.13
SMC4-223ENST00000493695 OR2T29Q8NH02 315 aa1.75□□□□□ -2.13
SMC4-223ENST00000493695 AGR3Q8TD06 166 aa1.75□□□□□ -2.13
SMC4-223ENST00000493695 ISG20Q96AZ6 181 aaKnown RBP1.75□□□□□ -2.13
SMC4-223ENST00000493695 APH1AQ96BI3 265 aa1.75□□□□□ -2.13
SMC4-223ENST00000493695 SCGB3A2Q96PL1 93 aa1.75□□□□□ -2.13
SMC4-223ENST00000493695 RHOXF2Q9BQY4 288 aa1.75□□□□□ -2.13
SMC4-223ENST00000493695 LHX5Q9H2C1 402 aa1.75□□□□□ -2.13
SMC4-223ENST00000493695 DHX35Q9H5Z1 703 aaKnown RBP1.75□□□□□ -2.13
SMC4-223ENST00000493695 ZC4H2Q9NQZ6 224 aa1.75□□□□□ -2.13
SMC4-223ENST00000493695 TUBG2Q9NRH3 451 aa1.75□□□□□ -2.13
SMC4-223ENST00000493695 DHCR7Q9UBM7 475 aaKnown RBP1.75□□□□□ -2.13
SMC4-223ENST00000493695 VAX2Q9UIW0 290 aa1.75□□□□□ -2.13
SMC4-223ENST00000493695 FARSAQ9Y285 508 aaKnown RBP1.75□□□□□ -2.13
SMC4-223ENST00000493695 ZNF608Q9ULD9 1512 aaPredicted RBP1.75□□□□□ -2.13
SMC4-223ENST00000493695 NEURL4Q96JN8 1562 aa1.74□□□□□ -2.13
SMC4-223ENST00000493695 NCF1BA6NI72 391 aaPredicted RBP1.74□□□□□ -2.13
SMC4-223ENST00000493695 PCNX2A6NKB5 2137 aa1.74□□□□□ -2.13
SMC4-223ENST00000493695 NCF1CA8MVU1 366 aaPredicted RBP1.74□□□□□ -2.13
SMC4-223ENST00000493695 PTHP01270 115 aa1.74□□□□□ -2.13
SMC4-223ENST00000493695 RPN2P04844 631 aa1.74□□□□□ -2.13
SMC4-223ENST00000493695 HSPD1P10809 573 aaKnown RBP1.74□□□□□ -2.13
SMC4-223ENST00000493695 PRKACBP22694 351 aa1.74□□□□□ -2.13
SMC4-223ENST00000493695 TAS2R43P59537 309 aa1.74□□□□□ -2.13
SMC4-223ENST00000493695 INCA1Q0VD86 236 aa1.74□□□□□ -2.13
SMC4-223ENST00000493695 DMC1Q14565 340 aa1.74□□□□□ -2.13
SMC4-223ENST00000493695 KLHL12Q53G59 568 aa1.74□□□□□ -2.13
SMC4-223ENST00000493695 MORN3Q6PF18 240 aaPredicted RBP1.74□□□□□ -2.13
SMC4-223ENST00000493695 CASP12Q6UXS9 341 aa1.74□□□□□ -2.13
SMC4-223ENST00000493695 NDUFAF7Q7L592 441 aa1.74□□□□□ -2.13
SMC4-223ENST00000493695 NT5DC3Q86UY8 548 aa1.74□□□□□ -2.13
SMC4-223ENST00000493695 STK40Q8N2I9 435 aa1.74□□□□□ -2.13
SMC4-223ENST00000493695 PROKR2Q8NFJ6 384 aa1.74□□□□□ -2.13
SMC4-223ENST00000493695 SLC26A10Q8NG04 563 aa1.74□□□□□ -2.13
SMC4-223ENST00000493695 OR10Z1Q8NGY1 313 aa1.74□□□□□ -2.13
SMC4-223ENST00000493695 CA5BP1Q8WTZ4 195 aa1.74□□□□□ -2.13
SMC4-223ENST00000493695 CDS1Q92903 461 aa1.74□□□□□ -2.13
SMC4-223ENST00000493695 ISOC2Q96AB3 205 aa1.74□□□□□ -2.13
SMC4-223ENST00000493695 ZNF707Q96C28 371 aaPredicted RBP1.74□□□□□ -2.13
SMC4-223ENST00000493695 NAA50Q9GZZ1 169 aaKnown RBP1.74□□□□□ -2.13
SMC4-223ENST00000493695 FANCEQ9HB96 536 aa1.74□□□□□ -2.13
SMC4-223ENST00000493695 CSNK1G1Q9HCP0 422 aa1.74□□□□□ -2.13
SMC4-223ENST00000493695 FBXO8Q9NRD0 319 aa1.74□□□□□ -2.13
SMC4-223ENST00000493695 DDX18Q9NVP1 670 aaKnown RBP1.74□□□□□ -2.13
SMC4-223ENST00000493695 IL37Q9NZH6 218 aa1.74□□□□□ -2.13
SMC4-223ENST00000493695 CES1P1Q9UKY3 287 aa1.74□□□□□ -2.13
SMC4-223ENST00000493695 RHBDD3Q9Y3P4 386 aa1.74□□□□□ -2.13
SMC4-223ENST00000493695 TRIP11Q15643 1979 aa1.74□□□□□ -2.13
SMC4-223ENST00000493695 IGHV6-1A0A0B4J1U7 121 aa1.73□□□□□ -2.13
SMC4-223ENST00000493695 IGKV1-6A0A0C4DH72 117 aa1.73□□□□□ -2.13
SMC4-223ENST00000493695 CEACAM18A8MTB9 384 aa1.73□□□□□ -2.13
SMC4-223ENST00000493695 CENPBD1B2RD01 187 aa1.73□□□□□ -2.13
SMC4-223ENST00000493695 POLR1CO15160 346 aaPredicted RBP1.73□□□□□ -2.13
SMC4-223ENST00000493695 CCDC22O60826 627 aa1.73□□□□□ -2.13
SMC4-223ENST00000493695 UPK1BO75841 260 aa1.73□□□□□ -2.13
SMC4-223ENST00000493695 LCA5LO95447 670 aa1.73□□□□□ -2.13
SMC4-223ENST00000493695 FSTL3O95633 263 aa1.73□□□□□ -2.13
SMC4-223ENST00000493695 KLK1P06870 262 aa1.73□□□□□ -2.13
SMC4-223ENST00000493695 RALBP11234 206 aa1.73□□□□□ -2.13
SMC4-223ENST00000493695 IL3RAP26951 378 aa1.73□□□□□ -2.13
SMC4-223ENST00000493695 CFHR2P36980 270 aa1.73□□□□□ -2.13
SMC4-223ENST00000493695 ERFP50548 548 aa1.73□□□□□ -2.13
SMC4-223ENST00000493695 IL15RAQ13261 267 aa1.73□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms