RNA–Protein interactions for RNA: ENST00000493683.5

RNF40-203, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 5,371 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-203ENST00000493683 IQCJQ1A5X6 159 aa18.08■□□□□ 0.48
RNF40-203ENST00000493683 VMA21Q3ZAQ7 101 aa18.08■□□□□ 0.48
RNF40-203ENST00000493683 FOXB1Q99853 325 aa18.08■□□□□ 0.48
RNF40-203ENST00000493683 WDR61Q9GZS3 305 aaKnown RBP18.08■□□□□ 0.48
RNF40-203ENST00000493683 A0A096LPE4 126 aa18.08■□□□□ 0.48
RNF40-203ENST00000493683 A0A1W2PPZ6 126 aa18.08■□□□□ 0.48
RNF40-203ENST00000493683 SFT2D2O95562 160 aa18.08■□□□□ 0.48
RNF40-203ENST00000493683 CXCL10P02778 98 aa18.08■□□□□ 0.48
RNF40-203ENST00000493683 B4GALT1P15291 398 aa18.08■□□□□ 0.48
RNF40-203ENST00000493683 PPP2CBP62714 309 aa18.08■□□□□ 0.48
RNF40-203ENST00000493683 PPP2CAP67775 309 aa18.08■□□□□ 0.48
RNF40-203ENST00000493683 CLDN23Q96B33 292 aa18.08■□□□□ 0.48
RNF40-203ENST00000493683 UCK1Q9HA47 277 aa18.08■□□□□ 0.48
RNF40-203ENST00000493683 ZNF835Q9Y2P0 537 aa18.08■□□□□ 0.48
RNF40-203ENST00000493683 POMT1Q9Y6A1 747 aa18.08■□□□□ 0.48
RNF40-203ENST00000493683 HSBP1O75506 76 aa18.08■□□□□ 0.48
RNF40-203ENST00000493683 RPS27P42677 84 aaKnown RBP18.08■□□□□ 0.48
RNF40-203ENST00000493683 PRSS36Q5K4E3 855 aa18.08■□□□□ 0.48
RNF40-203ENST00000493683 C17orf78Q8N4C9 275 aa18.08■□□□□ 0.48
RNF40-203ENST00000493683 TMEM230Q96A57 120 aa18.08■□□□□ 0.48
RNF40-203ENST00000493683 AKR1E2Q96JD6 320 aa18.08■□□□□ 0.48
RNF40-203ENST00000493683 LOXL2Q9Y4K0 774 aa18.08■□□□□ 0.48
RNF40-203ENST00000493683 SPNP16150 400 aa18.07■□□□□ 0.48
RNF40-203ENST00000493683 HMGA2P52926 109 aa18.07■□□□□ 0.48
RNF40-203ENST00000493683 ZNF528Q3MIS6 628 aa18.07■□□□□ 0.48
RNF40-203ENST00000493683 PLAC9Q5JTB6 97 aa18.07■□□□□ 0.48
RNF40-203ENST00000493683 RGS7BPQ6MZT1 257 aaPredicted RBP18.07■□□□□ 0.48
RNF40-203ENST00000493683 UQCC1Q9NVA1 299 aa18.07■□□□□ 0.48
RNF40-203ENST00000493683 M0R1B8 84 aa18.07■□□□□ 0.48
RNF40-203ENST00000493683 PGFP49763 221 aa18.07■□□□□ 0.48
RNF40-203ENST00000493683 PTTG1IPP53801 180 aa18.07■□□□□ 0.48
RNF40-203ENST00000493683 OR5I1Q13606 314 aa18.07■□□□□ 0.48
RNF40-203ENST00000493683 COL13A1Q5TAT6 717 aaPredicted RBP18.07■□□□□ 0.48
RNF40-203ENST00000493683 ROBO4Q8WZ75 1007 aa18.07■□□□□ 0.48
RNF40-203ENST00000493683 PPIL1Q9Y3C6 166 aa18.07■□□□□ 0.48
RNF40-203ENST00000493683 M0QZ24 198 aa18.07■□□□□ 0.48
RNF40-203ENST00000493683 FAHP16930 419 aa18.07■□□□□ 0.48
RNF40-203ENST00000493683 GNG3P63215 75 aa18.07■□□□□ 0.48
RNF40-203ENST00000493683 XAF1Q6GPH4 301 aa18.07■□□□□ 0.48
RNF40-203ENST00000493683 Q7L0L9 218 aa18.07■□□□□ 0.48
RNF40-203ENST00000493683 DOK1Q99704 481 aa18.07■□□□□ 0.48
RNF40-203ENST00000493683 HIST1H1DP16402 221 aaKnown RBP18.07■□□□□ 0.48
RNF40-203ENST00000493683 UBE3DQ7Z6J8 389 aa18.07■□□□□ 0.48
RNF40-203ENST00000493683 GLCCI1Q86VQ1 547 aa18.07■□□□□ 0.48
RNF40-203ENST00000493683 ADPRHL1Q8NDY3 354 aa18.07■□□□□ 0.48
RNF40-203ENST00000493683 C8orf44Q96CB5 159 aa18.07■□□□□ 0.48
RNF40-203ENST00000493683 NEIL1Q96FI4 390 aaPredicted RBP18.07■□□□□ 0.48
RNF40-203ENST00000493683 TMEM56Q96MV1 263 aa18.07■□□□□ 0.48
RNF40-203ENST00000493683 PRDM7Q9NQW5 492 aa18.07■□□□□ 0.48
RNF40-203ENST00000493683 IGLV3-16A0A075B6K0 115 aa18.06■□□□□ 0.48
RNF40-203ENST00000493683 CRYBB2P43320 205 aa18.06■□□□□ 0.48
RNF40-203ENST00000493683 CLEC9AQ6UXN8 241 aa18.06■□□□□ 0.48
RNF40-203ENST00000493683 WDR34Q96EX3 536 aa18.06■□□□□ 0.48
RNF40-203ENST00000493683 IFT22Q9H7X7 185 aa18.06■□□□□ 0.48
RNF40-203ENST00000493683 BMI1P35226 326 aa18.06■□□□□ 0.48
RNF40-203ENST00000493683 OR2T6Q8NHC8 308 aa18.06■□□□□ 0.48
RNF40-203ENST00000493683 PMP22Q01453 160 aa18.06■□□□□ 0.48
RNF40-203ENST00000493683 CLDN34H7C241 214 aa18.06■□□□□ 0.48
RNF40-203ENST00000493683 HNF1AP20823 631 aa18.06■□□□□ 0.48
RNF40-203ENST00000493683 ERVFC1-1P60608 527 aa18.06■□□□□ 0.48
RNF40-203ENST00000493683 NEURL2Q9BR09 285 aa18.06■□□□□ 0.48
RNF40-203ENST00000493683 VAMP8Q9BV40 100 aa18.06■□□□□ 0.48
RNF40-203ENST00000493683 TMEM30AQ9NV96 361 aa18.06■□□□□ 0.48
RNF40-203ENST00000493683 FAM157BP0CG42 384 aa18.05■□□□□ 0.48
RNF40-203ENST00000493683 TNFRSF1AP19438 455 aa18.05■□□□□ 0.48
RNF40-203ENST00000493683 B4GALNT1Q00973 533 aa18.05■□□□□ 0.48
RNF40-203ENST00000493683 ETFRF1Q6IPR1 90 aa18.05■□□□□ 0.48
RNF40-203ENST00000493683 TMEM88Q6PEY1 159 aa18.05■□□□□ 0.48
RNF40-203ENST00000493683 TINAGL1Q9GZM7 467 aaPredicted RBP18.05■□□□□ 0.48
RNF40-203ENST00000493683 HRASP01112 189 aa18.05■□□□□ 0.48
RNF40-203ENST00000493683 KIR2DS2P43631 304 aa18.05■□□□□ 0.48
RNF40-203ENST00000493683 IL13RA2Q14627 380 aa18.05■□□□□ 0.48
RNF40-203ENST00000493683 ARSGQ96EG1 525 aa18.05■□□□□ 0.48
RNF40-203ENST00000493683 RHNO1Q9BSD3 238 aa18.05■□□□□ 0.48
RNF40-203ENST00000493683 C1QTNF6Q9BXI9 259 aa18.05■□□□□ 0.48
RNF40-203ENST00000493683 IL21Q9HBE4 155 aa18.05■□□□□ 0.48
RNF40-203ENST00000493683 PLSCR3Q9NRY6 295 aa18.05■□□□□ 0.48
RNF40-203ENST00000493683 WSB2Q9NYS7 404 aaPredicted RBP18.05■□□□□ 0.48
RNF40-203ENST00000493683 UBE2L5PA0A1B0GUS4 154 aa18.05■□□□□ 0.48
RNF40-203ENST00000493683 LMO7DNF2Z398 122 aa18.05■□□□□ 0.48
RNF40-203ENST00000493683 NKG7Q16617 165 aa18.05■□□□□ 0.48
RNF40-203ENST00000493683 CEACAM16Q2WEN9 425 aa18.05■□□□□ 0.48
RNF40-203ENST00000493683 FAHD2BQ6P2I3 314 aaPredicted RBP18.05■□□□□ 0.48
RNF40-203ENST00000493683 FAHD2AQ96GK7 314 aa18.05■□□□□ 0.48
RNF40-203ENST00000493683 C4orf45Q96LM5 186 aa18.05■□□□□ 0.48
RNF40-203ENST00000493683 LSM2Q9Y333 95 aaKnown RBP18.05■□□□□ 0.48
RNF40-203ENST00000493683 HMSDA8MTL9 139 aa18.05■□□□□ 0.48
RNF40-203ENST00000493683 KRTDAPP60985 99 aa18.05■□□□□ 0.48
RNF40-203ENST00000493683 GUCA2AQ02747 115 aa18.05■□□□□ 0.48
RNF40-203ENST00000493683 MIDNQ504T8 468 aa18.05■□□□□ 0.48
RNF40-203ENST00000493683 CCL4L1Q8NHW4 92 aa18.05■□□□□ 0.48
RNF40-203ENST00000493683 NOL4LQ96MY1 436 aaPredicted RBP18.05■□□□□ 0.48
RNF40-203ENST00000493683 TRAPPC1Q9Y5R8 145 aa18.05■□□□□ 0.48
RNF40-203ENST00000493683 CNTRLQ7Z7A1 2325 aa18.05■□□□□ 0.48
RNF40-203ENST00000493683 PKD1L3Q7Z443 1732 aa18.04■□□□□ 0.48
RNF40-203ENST00000493683 SPTY2D1-AS1A0A0U1RR47 76 aa18.04■□□□□ 0.48
RNF40-203ENST00000493683 LRRC3CA6NJW4 275 aa18.04■□□□□ 0.48
RNF40-203ENST00000493683 MASP2O00187 686 aa18.04■□□□□ 0.48
RNF40-203ENST00000493683 HNRNPA3P51991 378 aaKnown RBP18.04■□□□□ 0.48
RNF40-203ENST00000493683 FA2HQ7L5A8 372 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms