RNA–Protein interactions for RNA: ENST00000491258.1

PHC3-213, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best)

Gene PHC3, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-213ENST00000491258 SRXN1Q9BYN0 137 aa2.23□□□□□ -2.05
PHC3-213ENST00000491258 ACTR6Q9GZN1 396 aa2.23□□□□□ -2.05
PHC3-213ENST00000491258 NMUR2Q9GZQ4 415 aa2.23□□□□□ -2.05
PHC3-213ENST00000491258 TMEM185BQ9H7F4 350 aa2.23□□□□□ -2.05
PHC3-213ENST00000491258 ELL3Q9HB65 397 aaPredicted RBP2.23□□□□□ -2.05
PHC3-213ENST00000491258 EML4Q9HC35 981 aaKnown RBP2.23□□□□□ -2.05
PHC3-213ENST00000491258 FANCFQ9NPI8 374 aa2.23□□□□□ -2.05
PHC3-213ENST00000491258 TIGARQ9NQ88 270 aa2.23□□□□□ -2.05
PHC3-213ENST00000491258 ZCCHC3Q9NUD5 404 aaKnown RBP2.23□□□□□ -2.05
PHC3-213ENST00000491258 ACER3Q9NUN7 267 aa2.23□□□□□ -2.05
PHC3-213ENST00000491258 SLC17A7Q9P2U7 560 aa2.23□□□□□ -2.05
PHC3-213ENST00000491258 GIMAP2Q9UG22 337 aa2.23□□□□□ -2.05
PHC3-213ENST00000491258 LRRK1Q38SD2 2015 aa2.23□□□□□ -2.05
PHC3-213ENST00000491258 DOCK9Q9BZ29 2069 aa2.22□□□□□ -2.05
PHC3-213ENST00000491258 IGHV3-15A0A0B4J1V0 119 aa2.22□□□□□ -2.05
PHC3-213ENST00000491258 NPIPA5A0A0B4J1W7 369 aa2.22□□□□□ -2.05
PHC3-213ENST00000491258 TRAV34A0A0B4J273 112 aa2.22□□□□□ -2.05
PHC3-213ENST00000491258 GOLGA8QA0A0J9YX86 632 aa2.22□□□□□ -2.05
PHC3-213ENST00000491258 GOLGA8OA6NCC3 632 aa2.22□□□□□ -2.05
PHC3-213ENST00000491258 GJE1A6NN92 205 aa2.22□□□□□ -2.05
PHC3-213ENST00000491258 TMEM114B3SHH9 223 aa2.22□□□□□ -2.05
PHC3-213ENST00000491258 NPIPA7E9PJI5 369 aa2.22□□□□□ -2.05
PHC3-213ENST00000491258 GOLGA8NF8WBI6 632 aa2.22□□□□□ -2.05
PHC3-213ENST00000491258 H3BNH8 94 aa2.22□□□□□ -2.05
PHC3-213ENST00000491258 PDLIM1O00151 329 aa2.22□□□□□ -2.05
PHC3-213ENST00000491258 CLOCKO15516 846 aa2.22□□□□□ -2.05
PHC3-213ENST00000491258 TYROBPO43914 113 aa2.22□□□□□ -2.05
PHC3-213ENST00000491258 RAMP1O60894 148 aa2.22□□□□□ -2.05
PHC3-213ENST00000491258 BCAS1O75363 584 aaPredicted RBP2.22□□□□□ -2.05
PHC3-213ENST00000491258 SPAG7O75391 227 aa2.22□□□□□ -2.05
PHC3-213ENST00000491258 UGT2B17O75795 530 aa2.22□□□□□ -2.05
PHC3-213ENST00000491258 H6PDO95479 791 aa2.22□□□□□ -2.05
PHC3-213ENST00000491258 C6orf47O95873 294 aa2.22□□□□□ -2.05
PHC3-213ENST00000491258 HSPB1P04792 205 aaKnown RBP2.22□□□□□ -2.05
PHC3-213ENST00000491258 BPGMP07738 259 aa2.22□□□□□ -2.05
PHC3-213ENST00000491258 KRT16P08779 473 aa2.22□□□□□ -2.05
PHC3-213ENST00000491258 NUDT17P0C025 328 aa2.22□□□□□ -2.05
PHC3-213ENST00000491258 NPIPA8P0DM63 369 aa2.22□□□□□ -2.05
PHC3-213ENST00000491258 ATP6V1C1P21283 382 aa2.22□□□□□ -2.05
PHC3-213ENST00000491258 IL32P24001 234 aa2.22□□□□□ -2.05
PHC3-213ENST00000491258 SERPINB5P36952 375 aa2.22□□□□□ -2.05
PHC3-213ENST00000491258 HPCAL1P37235 193 aa2.22□□□□□ -2.05
PHC3-213ENST00000491258 P2RX1P51575 399 aa2.22□□□□□ -2.05
PHC3-213ENST00000491258 CLDN8P56748 225 aa2.22□□□□□ -2.05
PHC3-213ENST00000491258 RPL27P61353 136 aaKnown RBP2.22□□□□□ -2.05
PHC3-213ENST00000491258 RPS4XP62701 263 aaKnown RBP2.22□□□□□ -2.05
PHC3-213ENST00000491258 HBA1P69905 142 aa2.22□□□□□ -2.05
PHC3-213ENST00000491258 SKP2Q13309 424 aa2.22□□□□□ -2.05
PHC3-213ENST00000491258 TMED1Q13445 227 aa2.22□□□□□ -2.05
PHC3-213ENST00000491258 PDK3Q15120 406 aa2.22□□□□□ -2.05
PHC3-213ENST00000491258 QPRTQ15274 297 aa2.22□□□□□ -2.05
PHC3-213ENST00000491258 TSC22D1Q15714 1073 aa2.22□□□□□ -2.05
PHC3-213ENST00000491258 ZNF141Q15928 474 aa2.22□□□□□ -2.05
PHC3-213ENST00000491258 MAPK14Q16539 360 aa2.22□□□□□ -2.05
PHC3-213ENST00000491258 CLEC12BQ2HXU8 276 aa2.22□□□□□ -2.05
PHC3-213ENST00000491258 SMU1Q2TAY7 513 aa2.22□□□□□ -2.05
PHC3-213ENST00000491258 PGGHGQ32M88 737 aa2.22□□□□□ -2.05
PHC3-213ENST00000491258 NDUFAF6Q330K2 333 aa2.22□□□□□ -2.05
PHC3-213ENST00000491258 ARHGAP11BQ3KRB8 267 aa2.22□□□□□ -2.05
PHC3-213ENST00000491258 IQCCQ4KMZ1 466 aa2.22□□□□□ -2.05
PHC3-213ENST00000491258 ATP6AP1LQ52LC2 224 aa2.22□□□□□ -2.05
PHC3-213ENST00000491258 DCST2Q5T1A1 773 aa2.22□□□□□ -2.05
PHC3-213ENST00000491258 PDZK1Q5T2W1 519 aa2.22□□□□□ -2.05
PHC3-213ENST00000491258 SHQ1Q6PI26 577 aaKnown RBP2.22□□□□□ -2.05
PHC3-213ENST00000491258 DNM1P46Q6ZS02 220 aa2.22□□□□□ -2.05
PHC3-213ENST00000491258 ZCCHC23Q6ZST2 131 aa2.22□□□□□ -2.05
PHC3-213ENST00000491258 Q6ZT83 130 aa2.22□□□□□ -2.05
PHC3-213ENST00000491258 EIF3MQ7L2H7 374 aaKnown RBP2.22□□□□□ -2.05
PHC3-213ENST00000491258 BHLHA15Q7RTS1 189 aaPredicted RBP2.22□□□□□ -2.05
PHC3-213ENST00000491258 OLIG3Q7RTU3 272 aa2.22□□□□□ -2.05
PHC3-213ENST00000491258 C6orf120Q7Z4R8 191 aa2.22□□□□□ -2.05
PHC3-213ENST00000491258 CLEC4FQ8N1N0 589 aa2.22□□□□□ -2.05
PHC3-213ENST00000491258 ZNF619Q8N2I2 560 aa2.22□□□□□ -2.05
PHC3-213ENST00000491258 ZNF433Q8N7K0 673 aaPredicted RBP2.22□□□□□ -2.05
PHC3-213ENST00000491258 FNDC5Q8NAU1 212 aa2.22□□□□□ -2.05
PHC3-213ENST00000491258 ATP6V1C2Q8NEY4 427 aa2.22□□□□□ -2.05
PHC3-213ENST00000491258 OR5D16Q8NGK9 328 aa2.22□□□□□ -2.05
PHC3-213ENST00000491258 OR1K1Q8NGR3 316 aa2.22□□□□□ -2.05
PHC3-213ENST00000491258 SFXN5Q8TD22 340 aa2.22□□□□□ -2.05
PHC3-213ENST00000491258 TCP10LQ8TDR4 215 aa2.22□□□□□ -2.05
PHC3-213ENST00000491258 UBLCP1Q8WVY7 318 aaPredicted RBP2.22□□□□□ -2.05
PHC3-213ENST00000491258 ST8SIA1Q92185 356 aa2.22□□□□□ -2.05
PHC3-213ENST00000491258 CPNE4Q96A23 557 aaPredicted RBP2.22□□□□□ -2.05
PHC3-213ENST00000491258 MRPL24Q96A35 216 aaKnown RBP2.22□□□□□ -2.05
PHC3-213ENST00000491258 CHMP6Q96FZ7 201 aa2.22□□□□□ -2.05
PHC3-213ENST00000491258 SDF2Q99470 211 aa2.22□□□□□ -2.05
PHC3-213ENST00000491258 C1orf50Q9BV19 199 aa2.22□□□□□ -2.05
PHC3-213ENST00000491258 THUMPD3Q9BV44 507 aaKnown RBP2.22□□□□□ -2.05
PHC3-213ENST00000491258 TMEM109Q9BVC6 243 aa2.22□□□□□ -2.05
PHC3-213ENST00000491258 REG4Q9BYZ8 158 aa2.22□□□□□ -2.05
PHC3-213ENST00000491258 ROPN1BQ9BZX4 212 aaPredicted RBP2.22□□□□□ -2.05
PHC3-213ENST00000491258 ZNF350Q9GZX5 532 aa2.22□□□□□ -2.05
PHC3-213ENST00000491258 COQ10BQ9H8M1 238 aa2.22□□□□□ -2.05
PHC3-213ENST00000491258 ROPN1Q9HAT0 212 aaPredicted RBP2.22□□□□□ -2.05
PHC3-213ENST00000491258 NGBQ9NPG2 151 aa2.22□□□□□ -2.05
PHC3-213ENST00000491258 IMPAD1Q9NX62 359 aa2.22□□□□□ -2.05
PHC3-213ENST00000491258 PLEK2Q9NYT0 353 aa2.22□□□□□ -2.05
PHC3-213ENST00000491258 TAS2R16Q9NYV7 291 aa2.22□□□□□ -2.05
PHC3-213ENST00000491258 LGALS13Q9UHV8 139 aa2.22□□□□□ -2.05
PHC3-213ENST00000491258 LIPT1Q9Y234 373 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms