RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 C12orf45Q8N5I9 185 aaPredicted RBP19.93■□□□□ 0.78
USF3-203ENST00000491165 ADPRHL1Q8NDY3 354 aa19.93■□□□□ 0.78
USF3-203ENST00000491165 OR51A2Q8NGJ7 313 aa19.93■□□□□ 0.78
USF3-203ENST00000491165 ZNF775Q96BV0 537 aaPredicted RBP19.93■□□□□ 0.78
USF3-203ENST00000491165 MFFQ9GZY8 342 aa19.93■□□□□ 0.78
USF3-203ENST00000491165 RFPL4AA6NLU0 287 aa19.93■□□□□ 0.78
USF3-203ENST00000491165 ZNF716A6NP11 495 aa19.93■□□□□ 0.78
USF3-203ENST00000491165 RFPL4AL1F8VTS6 287 aa19.93■□□□□ 0.78
USF3-203ENST00000491165 M0QYG6 137 aa19.93■□□□□ 0.78
USF3-203ENST00000491165 DNPH1O43598 174 aa19.93■□□□□ 0.78
USF3-203ENST00000491165 NTF4P34130 210 aa19.93■□□□□ 0.78
USF3-203ENST00000491165 TMED4Q7Z7H5 227 aa19.93■□□□□ 0.78
USF3-203ENST00000491165 JAGN1Q8N5M9 183 aa19.93■□□□□ 0.78
USF3-203ENST00000491165 DOCK7Q96N67 2140 aa19.93■□□□□ 0.78
USF3-203ENST00000491165 TINAGL1Q9GZM7 467 aaPredicted RBP19.93■□□□□ 0.78
USF3-203ENST00000491165 ZNF107Q9UII5 783 aaPredicted RBP19.93■□□□□ 0.78
USF3-203ENST00000491165 LOC107986453A0A1B0GWG9 222 aa19.92■□□□□ 0.78
USF3-203ENST00000491165 DOK2O60496 412 aa19.92■□□□□ 0.78
USF3-203ENST00000491165 ISG15P05161 165 aa19.92■□□□□ 0.78
USF3-203ENST00000491165 ZNF823P16415 610 aa19.92■□□□□ 0.78
USF3-203ENST00000491165 ACHEP22303 614 aa19.92■□□□□ 0.78
USF3-203ENST00000491165 SPOCK1Q08629 439 aa19.92■□□□□ 0.78
USF3-203ENST00000491165 PMPCAQ10713 525 aa19.92■□□□□ 0.78
USF3-203ENST00000491165 PDSS1Q5T2R2 415 aa19.92■□□□□ 0.78
USF3-203ENST00000491165 ABLIM2Q6H8Q1 611 aa19.92■□□□□ 0.78
USF3-203ENST00000491165 OR6K3Q8NGY3 331 aa19.92■□□□□ 0.78
USF3-203ENST00000491165 MYOZ1Q9NP98 299 aaPredicted RBP19.92■□□□□ 0.78
USF3-203ENST00000491165 ARHGAP21Q5T5U3 1957 aa19.92■□□□□ 0.78
USF3-203ENST00000491165 FREM1Q5H8C1 2179 aa19.91■□□□□ 0.78
USF3-203ENST00000491165 ZNF736B4DX44 427 aaPredicted RBP19.91■□□□□ 0.78
USF3-203ENST00000491165 KRBOX1C9JBD0 128 aa19.91■□□□□ 0.78
USF3-203ENST00000491165 LDLRAD4O15165 306 aa19.91■□□□□ 0.78
USF3-203ENST00000491165 TRAF3IP2O43734 574 aaPredicted RBP19.91■□□□□ 0.78
USF3-203ENST00000491165 OVCH2Q7RTZ1 564 aa19.91■□□□□ 0.78
USF3-203ENST00000491165 RPRMLQ8N4K4 120 aa19.91■□□□□ 0.78
USF3-203ENST00000491165 CPT1CQ8TCG5 803 aa19.91■□□□□ 0.78
USF3-203ENST00000491165 ZNF385AQ96PM9 386 aaKnown RBP19.91■□□□□ 0.78
USF3-203ENST00000491165 EMC6Q9BV81 110 aa19.91■□□□□ 0.78
USF3-203ENST00000491165 OR52A1Q9UKL2 312 aa19.91■□□□□ 0.78
USF3-203ENST00000491165 A6NIZ1 184 aa19.91■□□□□ 0.78
USF3-203ENST00000491165 A8MXK9 166 aa19.91■□□□□ 0.78
USF3-203ENST00000491165 HOXD4P09016 255 aaPredicted RBP19.91■□□□□ 0.78
USF3-203ENST00000491165 PRKACBP22694 351 aa19.91■□□□□ 0.78
USF3-203ENST00000491165 RAP1BP61224 184 aa19.91■□□□□ 0.78
USF3-203ENST00000491165 RAP1AP62834 184 aa19.91■□□□□ 0.78
USF3-203ENST00000491165 ZNF660Q6AZW8 331 aaPredicted RBP19.91■□□□□ 0.78
USF3-203ENST00000491165 ZNF585AQ6P3V2 769 aa19.91■□□□□ 0.78
USF3-203ENST00000491165 DNM1P34Q6PK57 102 aa19.91■□□□□ 0.78
USF3-203ENST00000491165 ZNF704Q6ZNC4 412 aaPredicted RBP19.91■□□□□ 0.78
USF3-203ENST00000491165 SLC51BQ86UW2 128 aa19.91■□□□□ 0.78
USF3-203ENST00000491165 CD163Q86VB7 1156 aa19.91■□□□□ 0.78
USF3-203ENST00000491165 SLC26A10Q8NG04 563 aa19.91■□□□□ 0.78
USF3-203ENST00000491165 G6PC2Q9NQR9 355 aa19.91■□□□□ 0.78
USF3-203ENST00000491165 CLCF1Q9UBD9 225 aa19.91■□□□□ 0.78
USF3-203ENST00000491165 CYTIPO60759 359 aa19.9■□□□□ 0.78
USF3-203ENST00000491165 CD74P04233 296 aa19.9■□□□□ 0.78
USF3-203ENST00000491165 MPGP29372 298 aa19.9■□□□□ 0.78
USF3-203ENST00000491165 LY6G6FQ5SQ64 297 aa19.9■□□□□ 0.78
USF3-203ENST00000491165 C1orf100Q5SVJ3 147 aa19.9■□□□□ 0.78
USF3-203ENST00000491165 CLVS2Q5SYC1 327 aa19.9■□□□□ 0.78
USF3-203ENST00000491165 PXDC1Q5TGL8 231 aa19.9■□□□□ 0.78
USF3-203ENST00000491165 LRFN4Q6PJG9 635 aa19.9■□□□□ 0.78
USF3-203ENST00000491165 GFRALQ6UXV0 394 aa19.9■□□□□ 0.78
USF3-203ENST00000491165 DCXRQ7Z4W1 244 aa19.9■□□□□ 0.78
USF3-203ENST00000491165 PDZD9Q8IXQ8 264 aa19.9■□□□□ 0.78
USF3-203ENST00000491165 NKAIN3Q8N8D7 197 aa19.9■□□□□ 0.78
USF3-203ENST00000491165 ZIC4Q8N9L1 334 aa19.9■□□□□ 0.78
USF3-203ENST00000491165 STEAP2Q8NFT2 490 aa19.9■□□□□ 0.78
USF3-203ENST00000491165 PTX4Q96A99 478 aa19.9■□□□□ 0.78
USF3-203ENST00000491165 OXGR1Q96P68 337 aa19.9■□□□□ 0.78
USF3-203ENST00000491165 LOC390937A0A1W2PQ73 354 aa19.9■□□□□ 0.78
USF3-203ENST00000491165 ZNF735P0CB33 412 aa19.9■□□□□ 0.78
USF3-203ENST00000491165 RTL6Q6ICC9 239 aa19.9■□□□□ 0.78
USF3-203ENST00000491165 BPIFB2Q8N4F0 458 aa19.9■□□□□ 0.78
USF3-203ENST00000491165 OR9K2Q8NGE7 335 aa19.9■□□□□ 0.78
USF3-203ENST00000491165 TRIB1Q96RU8 372 aa19.9■□□□□ 0.78
USF3-203ENST00000491165 NAA11Q9BSU3 229 aaPredicted RBP19.9■□□□□ 0.78
USF3-203ENST00000491165 ZMAT3Q9HA38 289 aaKnown RBP19.9■□□□□ 0.78
USF3-203ENST00000491165 TRAV14DV4A0A0A6YYC5 116 aa19.89■□□□□ 0.77
USF3-203ENST00000491165 BET1O15155 118 aa19.89■□□□□ 0.77
USF3-203ENST00000491165 ATXN7O15265 892 aaPredicted RBP19.89■□□□□ 0.77
USF3-203ENST00000491165 TPD52L2O43399 206 aaKnown RBP19.89■□□□□ 0.77
USF3-203ENST00000491165 AGTR1P30556 359 aa19.89■□□□□ 0.77
USF3-203ENST00000491165 TUSC1Q2TAM9 212 aa19.89■□□□□ 0.77
USF3-203ENST00000491165 MOGAT2Q3SYC2 334 aa19.89■□□□□ 0.77
USF3-203ENST00000491165 ATPAF1Q5TC12 328 aaPredicted RBP19.89■□□□□ 0.77
USF3-203ENST00000491165 TMEM244Q5VVB8 128 aa19.89■□□□□ 0.77
USF3-203ENST00000491165 UEVLDQ8IX04 471 aa19.89■□□□□ 0.77
USF3-203ENST00000491165 OR1J2Q8NGS2 313 aa19.89■□□□□ 0.77
USF3-203ENST00000491165 ST7LQ8TDW4 575 aa19.89■□□□□ 0.77
USF3-203ENST00000491165 ASB10Q8WXI3 467 aa19.89■□□□□ 0.77
USF3-203ENST00000491165 MYEF2Q9P2K5 600 aaKnown RBP19.89■□□□□ 0.77
USF3-203ENST00000491165 MCTS1Q9ULC4 181 aaKnown RBP19.89■□□□□ 0.77
USF3-203ENST00000491165 LOC102725191A0A1B0GVB3 256 aa19.88■□□□□ 0.77
USF3-203ENST00000491165 TMEM269A0A1B0GVZ9 245 aa19.88■□□□□ 0.77
USF3-203ENST00000491165 SPDEFO95238 335 aa19.88■□□□□ 0.77
USF3-203ENST00000491165 ZNF43P17038 809 aa19.88■□□□□ 0.77
USF3-203ENST00000491165 CAPZA1P52907 286 aa19.88■□□□□ 0.77
USF3-203ENST00000491165 ACSF3Q4G176 576 aaPredicted RBP19.88■□□□□ 0.77
USF3-203ENST00000491165 OR10K2Q6IF99 312 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms