RNA–Protein interactions for RNA: ENST00000489485.5

CLDN11-209, Transcript of claudin 11, humanhuman

TSL 2

Gene CLDN11, Length 1,854 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-209ENST00000489485 FTMTQ8N4E7 242 aa12.17□□□□□ -0.46
CLDN11-209ENST00000489485 NRGNQ92686 78 aa12.17□□□□□ -0.46
CLDN11-209ENST00000489485 LIME1Q9H400 295 aa12.17□□□□□ -0.46
CLDN11-209ENST00000489485 MSL2Q9HCI7 577 aa12.17□□□□□ -0.46
CLDN11-209ENST00000489485 DYNLRB1Q9NP97 96 aa12.17□□□□□ -0.46
CLDN11-209ENST00000489485 CSMD2Q7Z408 3487 aa12.16□□□□□ -0.46
CLDN11-209ENST00000489485 ANKRD30BLA7E2S9 258 aa12.16□□□□□ -0.46
CLDN11-209ENST00000489485 H3BMQ9 156 aa12.16□□□□□ -0.46
CLDN11-209ENST00000489485 UCHL1P09936 223 aa12.16□□□□□ -0.46
CLDN11-209ENST00000489485 NAT2P11245 290 aa12.16□□□□□ -0.46
CLDN11-209ENST00000489485 BMP4P12644 408 aa12.16□□□□□ -0.46
CLDN11-209ENST00000489485 ZNF20P17024 532 aa12.16□□□□□ -0.46
CLDN11-209ENST00000489485 MMP15P51511 669 aa12.16□□□□□ -0.46
CLDN11-209ENST00000489485 SWI5Q1ZZU3 235 aa12.16□□□□□ -0.46
CLDN11-209ENST00000489485 HSD17B12Q53GQ0 312 aa12.16□□□□□ -0.46
CLDN11-209ENST00000489485 PAMR1Q6UXH9 720 aa12.16□□□□□ -0.46
CLDN11-209ENST00000489485 Q6ZSR3 168 aa12.16□□□□□ -0.46
CLDN11-209ENST00000489485 SERPINA12Q8IW75 414 aa12.16□□□□□ -0.46
CLDN11-209ENST00000489485 CSNK2A3Q8NEV1 391 aa12.16□□□□□ -0.46
CLDN11-209ENST00000489485 OR8G5Q8NG78 346 aa12.16□□□□□ -0.46
CLDN11-209ENST00000489485 KCTD7Q96MP8 289 aa12.16□□□□□ -0.46
CLDN11-209ENST00000489485 OCEL1Q9H607 264 aa12.16□□□□□ -0.46
CLDN11-209ENST00000489485 TRBV5-7A0A0A0MS05 114 aa12.15□□□□□ -0.46
CLDN11-209ENST00000489485 PFDN1O60925 122 aa12.15□□□□□ -0.46
CLDN11-209ENST00000489485 ARL6IP5O75915 188 aa12.15□□□□□ -0.46
CLDN11-209ENST00000489485 CD8AP01732 235 aa12.15□□□□□ -0.46
CLDN11-209ENST00000489485 RAF1P04049 648 aa12.15□□□□□ -0.46
CLDN11-209ENST00000489485 SRMP19623 302 aa12.15□□□□□ -0.46
CLDN11-209ENST00000489485 CA6P23280 308 aa12.15□□□□□ -0.46
CLDN11-209ENST00000489485 ASPHD2Q6ICH7 369 aa12.15□□□□□ -0.46
CLDN11-209ENST00000489485 DTX2Q86UW9 622 aa12.15□□□□□ -0.46
CLDN11-209ENST00000489485 ZCCHC24Q8N2G6 241 aaKnown RBP12.15□□□□□ -0.46
CLDN11-209ENST00000489485 PARP16Q8N5Y8 322 aa12.15□□□□□ -0.46
CLDN11-209ENST00000489485 TRAF4Q9BUZ4 470 aaPredicted RBP12.15□□□□□ -0.46
CLDN11-209ENST00000489485 PAPOLGQ9BWT3 736 aaKnown RBP12.15□□□□□ -0.46
CLDN11-209ENST00000489485 MS4A5Q9H3V2 200 aa12.15□□□□□ -0.46
CLDN11-209ENST00000489485 TMEM100Q9NV29 134 aa12.15□□□□□ -0.46
CLDN11-209ENST00000489485 TAS2R4Q9NYW5 299 aa12.15□□□□□ -0.46
CLDN11-209ENST00000489485 RHBDD3Q9Y3P4 386 aa12.15□□□□□ -0.46
CLDN11-209ENST00000489485 PMF1-BGLAPU3KQ54 211 aa12.15□□□□□ -0.46
CLDN11-209ENST00000489485 ITPR2Q14571 2701 aa12.15□□□□□ -0.46
CLDN11-209ENST00000489485 USF3Q68DE3 2245 aa12.15□□□□□ -0.46
CLDN11-209ENST00000489485 TRAV8-7A0A075B6U6 113 aa12.14□□□□□ -0.47
CLDN11-209ENST00000489485 SHISA3A0PJX4 238 aa12.14□□□□□ -0.47
CLDN11-209ENST00000489485 DHRS7CA6NNS2 312 aa12.14□□□□□ -0.47
CLDN11-209ENST00000489485 ZNF81P51508 661 aa12.14□□□□□ -0.47
CLDN11-209ENST00000489485 MXD1Q05195 221 aa12.14□□□□□ -0.47
CLDN11-209ENST00000489485 CCDC54Q8NEL0 328 aa12.14□□□□□ -0.47
CLDN11-209ENST00000489485 OR5D14Q8NGL3 314 aa12.14□□□□□ -0.47
CLDN11-209ENST00000489485 NDNFQ8TB73 568 aa12.14□□□□□ -0.47
CLDN11-209ENST00000489485 PIGCQ92535 297 aa12.14□□□□□ -0.47
CLDN11-209ENST00000489485 PHYHIPQ92561 330 aa12.14□□□□□ -0.47
CLDN11-209ENST00000489485 GTF3AQ92664 365 aaKnown RBP12.14□□□□□ -0.47
CLDN11-209ENST00000489485 THRSPQ92748 146 aa12.14□□□□□ -0.47
CLDN11-209ENST00000489485 CCL19Q99731 98 aa12.14□□□□□ -0.47
CLDN11-209ENST00000489485 VRK1Q99986 396 aaPredicted RBP12.14□□□□□ -0.47
CLDN11-209ENST00000489485 PPP1R3EQ9H7J1 279 aa12.14□□□□□ -0.47
CLDN11-209ENST00000489485 CYSLTR2Q9NS75 346 aa12.14□□□□□ -0.47
CLDN11-209ENST00000489485 MRPL15Q9P015 296 aaKnown RBP12.14□□□□□ -0.47
CLDN11-209ENST00000489485 CKLFQ9UBR5 152 aa12.14□□□□□ -0.47
CLDN11-209ENST00000489485 CGGBP1Q9UFW8 167 aaPredicted RBP12.14□□□□□ -0.47
CLDN11-209ENST00000489485 ANKRD17O75179 2603 aaKnown RBP12.14□□□□□ -0.47
CLDN11-209ENST00000489485 ASH1LQ9NR48 2969 aaKnown RBP12.14□□□□□ -0.47
CLDN11-209ENST00000489485 ZNF816-ZNF321PA0A0X1KG74 233 aa12.14□□□□□ -0.47
CLDN11-209ENST00000489485 TRIM64BA6NI03 449 aa12.14□□□□□ -0.47
CLDN11-209ENST00000489485 ZSCAN5BA6NJL1 495 aa12.14□□□□□ -0.47
CLDN11-209ENST00000489485 SPRY3O43610 288 aa12.14□□□□□ -0.47
CLDN11-209ENST00000489485 MAS1P04201 325 aa12.14□□□□□ -0.47
CLDN11-209ENST00000489485 SDC2P34741 201 aa12.14□□□□□ -0.47
CLDN11-209ENST00000489485 SPCS2Q15005 226 aa12.14□□□□□ -0.47
CLDN11-209ENST00000489485 C11orf71Q6IPW1 123 aa12.14□□□□□ -0.47
CLDN11-209ENST00000489485 Q6ZR03 302 aa12.14□□□□□ -0.47
CLDN11-209ENST00000489485 OR2Z1Q8NG97 314 aa12.14□□□□□ -0.47
CLDN11-209ENST00000489485 OR10AD1Q8NGE0 317 aa12.14□□□□□ -0.47
CLDN11-209ENST00000489485 OR13G1Q8NGZ3 307 aa12.14□□□□□ -0.47
CLDN11-209ENST00000489485 DVL3Q92997 716 aaPredicted RBP12.14□□□□□ -0.47
CLDN11-209ENST00000489485 BORCS5Q969J3 196 aa12.14□□□□□ -0.47
CLDN11-209ENST00000489485 SLC30A2Q9BRI3 323 aa12.14□□□□□ -0.47
CLDN11-209ENST00000489485 CACNG6Q9BXT2 260 aa12.14□□□□□ -0.47
CLDN11-209ENST00000489485 TPK1Q9H3S4 243 aa12.14□□□□□ -0.47
CLDN11-209ENST00000489485 TCF7L1Q9HCS4 588 aa12.14□□□□□ -0.47
CLDN11-209ENST00000489485 SMIM30A4D0T7 59 aa12.13□□□□□ -0.47
CLDN11-209ENST00000489485 ZNF850A8MQ14 1090 aa12.13□□□□□ -0.47
CLDN11-209ENST00000489485 CDKN1AP38936 164 aa12.13□□□□□ -0.47
CLDN11-209ENST00000489485 SERPINB10P48595 397 aa12.13□□□□□ -0.47
CLDN11-209ENST00000489485 CEP78Q5JTW2 689 aa12.13□□□□□ -0.47
CLDN11-209ENST00000489485 OR51A2Q8NGJ7 313 aa12.13□□□□□ -0.47
CLDN11-209ENST00000489485 OR13C9Q8NGT0 318 aa12.13□□□□□ -0.47
CLDN11-209ENST00000489485 C10orf35Q96D05 121 aa12.13□□□□□ -0.47
CLDN11-209ENST00000489485 BCL7BQ9BQE9 202 aa12.13□□□□□ -0.47
CLDN11-209ENST00000489485 CHST5Q9GZS9 411 aa12.13□□□□□ -0.47
CLDN11-209ENST00000489485 C17orf100A8MU93 164 aa12.12□□□□□ -0.47
CLDN11-209ENST00000489485 H0YL77 283 aa12.12□□□□□ -0.47
CLDN11-209ENST00000489485 SLC22A1O15245 554 aa12.12□□□□□ -0.47
CLDN11-209ENST00000489485 GMDSO60547 372 aa12.12□□□□□ -0.47
CLDN11-209ENST00000489485 CDRT1O95170 752 aa12.12□□□□□ -0.47
CLDN11-209ENST00000489485 MYL9P24844 172 aa12.12□□□□□ -0.47
CLDN11-209ENST00000489485 RANBP1P43487 201 aa12.12□□□□□ -0.47
CLDN11-209ENST00000489485 PRDX4Q13162 271 aa12.12□□□□□ -0.47
CLDN11-209ENST00000489485 OR8G1Q15617 311 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms