RNA–Protein interactions for RNA: ENST00000489032.5

TRAPPC12-221, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-221ENST00000489032 MOKQ9UQ07 419 aa6.89□□□□□ -1.31
TRAPPC12-221ENST00000489032 LAMP3Q9UQV4 416 aa6.89□□□□□ -1.31
TRAPPC12-221ENST00000489032 CUBNO60494 3623 aa6.89□□□□□ -1.31
TRAPPC12-221ENST00000489032 FAM183AA6NL82 134 aa6.88□□□□□ -1.31
TRAPPC12-221ENST00000489032 PTGES3LE9PB15 166 aa6.88□□□□□ -1.31
TRAPPC12-221ENST00000489032 DCTN6O00399 190 aa6.88□□□□□ -1.31
TRAPPC12-221ENST00000489032 HS3ST1O14792 307 aa6.88□□□□□ -1.31
TRAPPC12-221ENST00000489032 SGCEO43556 437 aa6.88□□□□□ -1.31
TRAPPC12-221ENST00000489032 DOK2O60496 412 aa6.88□□□□□ -1.31
TRAPPC12-221ENST00000489032 MMP7P09237 267 aaPredicted RBP6.88□□□□□ -1.31
TRAPPC12-221ENST00000489032 ZNF14P17017 642 aaPredicted RBP6.88□□□□□ -1.31
TRAPPC12-221ENST00000489032 SPI1P17947 270 aa6.88□□□□□ -1.31
TRAPPC12-221ENST00000489032 CCNOP22674 350 aa6.88□□□□□ -1.31
TRAPPC12-221ENST00000489032 STOMP27105 288 aa6.88□□□□□ -1.31
TRAPPC12-221ENST00000489032 LOXP28300 417 aaPredicted RBP6.88□□□□□ -1.31
TRAPPC12-221ENST00000489032 RPS23P62266 143 aaKnown RBP6.88□□□□□ -1.31
TRAPPC12-221ENST00000489032 ENDOGQ14249 297 aaKnown RBP6.88□□□□□ -1.31
TRAPPC12-221ENST00000489032 IL13RA2Q14627 380 aa6.88□□□□□ -1.31
TRAPPC12-221ENST00000489032 CNPY1Q3B7I2 92 aa6.88□□□□□ -1.31
TRAPPC12-221ENST00000489032 KLHL12Q53G59 568 aa6.88□□□□□ -1.31
TRAPPC12-221ENST00000489032 PABPC1L2AQ5JQF8 200 aa6.88□□□□□ -1.31
TRAPPC12-221ENST00000489032 SLC35D3Q5M8T2 416 aa6.88□□□□□ -1.31
TRAPPC12-221ENST00000489032 LCN1P1Q5VSP4 162 aa6.88□□□□□ -1.31
TRAPPC12-221ENST00000489032 SLX4IPQ5VYV7 408 aa6.88□□□□□ -1.31
TRAPPC12-221ENST00000489032 PLBD1Q6P4A8 553 aa6.88□□□□□ -1.31
TRAPPC12-221ENST00000489032 PRSS57Q6UWY2 283 aa6.88□□□□□ -1.31
TRAPPC12-221ENST00000489032 FBXL14Q8N1E6 418 aa6.88□□□□□ -1.31
TRAPPC12-221ENST00000489032 LRRC75A-AS1Q8N1F1 130 aa6.88□□□□□ -1.31
TRAPPC12-221ENST00000489032 ZNF611Q8N823 705 aa6.88□□□□□ -1.31
TRAPPC12-221ENST00000489032 TCEANCQ8N8B7 351 aa6.88□□□□□ -1.31
TRAPPC12-221ENST00000489032 ZNF540Q8NDQ6 660 aa6.88□□□□□ -1.31
TRAPPC12-221ENST00000489032 GJC3Q8NFK1 279 aa6.88□□□□□ -1.31
TRAPPC12-221ENST00000489032 KBTBD8Q8NFY9 601 aa6.88□□□□□ -1.31
TRAPPC12-221ENST00000489032 SLC26A10Q8NG04 563 aa6.88□□□□□ -1.31
TRAPPC12-221ENST00000489032 OR51L1Q8NGJ5 315 aa6.88□□□□□ -1.31
TRAPPC12-221ENST00000489032 RHOXF1Q8NHV9 184 aa6.88□□□□□ -1.31
TRAPPC12-221ENST00000489032 ZNF420Q8TAQ5 688 aaPredicted RBP6.88□□□□□ -1.31
TRAPPC12-221ENST00000489032 CNIH3Q8TBE1 160 aa6.88□□□□□ -1.31
TRAPPC12-221ENST00000489032 FCGR1BQ92637 280 aa6.88□□□□□ -1.31
TRAPPC12-221ENST00000489032 PIGTQ969N2 578 aa6.88□□□□□ -1.31
TRAPPC12-221ENST00000489032 FBXO17Q96EF6 278 aa6.88□□□□□ -1.31
TRAPPC12-221ENST00000489032 PIMREGQ9BSJ6 248 aa6.88□□□□□ -1.31
TRAPPC12-221ENST00000489032 OR2H1Q9GZK4 316 aa6.88□□□□□ -1.31
TRAPPC12-221ENST00000489032 YIPF3Q9GZM5 350 aa6.88□□□□□ -1.31
TRAPPC12-221ENST00000489032 CCDC90BQ9GZT6 254 aa6.88□□□□□ -1.31
TRAPPC12-221ENST00000489032 DUSP21Q9H596 190 aa6.88□□□□□ -1.31
TRAPPC12-221ENST00000489032 PLEKHF2Q9H8W4 249 aa6.88□□□□□ -1.31
TRAPPC12-221ENST00000489032 PLEK2Q9NYT0 353 aa6.88□□□□□ -1.31
TRAPPC12-221ENST00000489032 PTTG2Q9NZH5 202 aa6.88□□□□□ -1.31
TRAPPC12-221ENST00000489032 ZNF224Q9NZL3 707 aa6.88□□□□□ -1.31
TRAPPC12-221ENST00000489032 PCDHGB1Q9Y5G3 927 aa6.88□□□□□ -1.31
TRAPPC12-221ENST00000489032 SONP18583 2426 aaKnown RBP6.87□□□□□ -1.31
TRAPPC12-221ENST00000489032 IGHV2OR16-5A0A0B4J2B6 119 aa6.87□□□□□ -1.31
TRAPPC12-221ENST00000489032 C5orf49A4QMS7 147 aa6.87□□□□□ -1.31
TRAPPC12-221ENST00000489032 EFCAB10A6NFE3 127 aa6.87□□□□□ -1.31
TRAPPC12-221ENST00000489032 SNTNA6NMZ2 147 aa6.87□□□□□ -1.31
TRAPPC12-221ENST00000489032 SHISA9B4DS77 424 aa6.87□□□□□ -1.31
TRAPPC12-221ENST00000489032 ATP6V1G2-DDX39BF2Z307 99 aa6.87□□□□□ -1.31
TRAPPC12-221ENST00000489032 H3BSA7 217 aa6.87□□□□□ -1.31
TRAPPC12-221ENST00000489032 PHF1O43189 567 aaPredicted RBP6.87□□□□□ -1.31
TRAPPC12-221ENST00000489032 TLX2O43763 284 aaPredicted RBP6.87□□□□□ -1.31
TRAPPC12-221ENST00000489032 SMPD2O60906 423 aa6.87□□□□□ -1.31
TRAPPC12-221ENST00000489032 GLCEO94923 617 aa6.87□□□□□ -1.31
TRAPPC12-221ENST00000489032 MPZL1O95297 269 aa6.87□□□□□ -1.31
TRAPPC12-221ENST00000489032 GYPBP06028 91 aa6.87□□□□□ -1.31
TRAPPC12-221ENST00000489032 SPARCP09486 303 aa6.87□□□□□ -1.31
TRAPPC12-221ENST00000489032 COX5BP10606 129 aa6.87□□□□□ -1.31
TRAPPC12-221ENST00000489032 RAD52P43351 418 aa6.87□□□□□ -1.31
TRAPPC12-221ENST00000489032 HTR5AP47898 357 aa6.87□□□□□ -1.31
TRAPPC12-221ENST00000489032 ENTPD1P49961 510 aa6.87□□□□□ -1.31
TRAPPC12-221ENST00000489032 FABP6P51161 128 aa6.87□□□□□ -1.31
TRAPPC12-221ENST00000489032 TMBIM6P55061 237 aa6.87□□□□□ -1.31
TRAPPC12-221ENST00000489032 SNRPGP62308 76 aaKnown RBP6.87□□□□□ -1.31
TRAPPC12-221ENST00000489032 SLC35A2P78381 396 aa6.87□□□□□ -1.31
TRAPPC12-221ENST00000489032 PSG4Q00888 419 aa6.87□□□□□ -1.31
TRAPPC12-221ENST00000489032 ECH1Q13011 328 aa6.87□□□□□ -1.31
TRAPPC12-221ENST00000489032 NEDD8Q15843 81 aa6.87□□□□□ -1.31
TRAPPC12-221ENST00000489032 MEP1BQ16820 701 aa6.87□□□□□ -1.31
TRAPPC12-221ENST00000489032 AGAP6Q5VW22 663 aa6.87□□□□□ -1.31
TRAPPC12-221ENST00000489032 ZNF774Q6NX45 483 aa6.87□□□□□ -1.31
TRAPPC12-221ENST00000489032 ZNF544Q6NX49 715 aa6.87□□□□□ -1.31
TRAPPC12-221ENST00000489032 SHFQ7M4L6 423 aa6.87□□□□□ -1.31
TRAPPC12-221ENST00000489032 PRSS48Q7RTY5 328 aa6.87□□□□□ -1.31
TRAPPC12-221ENST00000489032 GID4Q8IVV7 300 aa6.87□□□□□ -1.31
TRAPPC12-221ENST00000489032 ENTHD1Q8IYW4 607 aa6.87□□□□□ -1.31
TRAPPC12-221ENST00000489032 FAM185AQ8N0U4 392 aa6.87□□□□□ -1.31
TRAPPC12-221ENST00000489032 TMEM217Q8N7C4 229 aa6.87□□□□□ -1.31
TRAPPC12-221ENST00000489032 AKR7LQ8NHP1 331 aa6.87□□□□□ -1.31
TRAPPC12-221ENST00000489032 FGFBP3Q8TAT2 258 aa6.87□□□□□ -1.31
TRAPPC12-221ENST00000489032 TMEM163Q8TC26 289 aa6.87□□□□□ -1.31
TRAPPC12-221ENST00000489032 SMAP2Q8WU79 429 aaPredicted RBP6.87□□□□□ -1.31
TRAPPC12-221ENST00000489032 INTS14Q96SY0 518 aa6.87□□□□□ -1.31
TRAPPC12-221ENST00000489032 DDOQ99489 341 aa6.87□□□□□ -1.31
TRAPPC12-221ENST00000489032 CCL19Q99731 98 aa6.87□□□□□ -1.31
TRAPPC12-221ENST00000489032 DHRS9Q9BPW9 319 aa6.87□□□□□ -1.31
TRAPPC12-221ENST00000489032 NMNAT2Q9BZQ4 307 aa6.87□□□□□ -1.31
TRAPPC12-221ENST00000489032 BCL2L14Q9BZR8 327 aa6.87□□□□□ -1.31
TRAPPC12-221ENST00000489032 HDHD2Q9H0R4 259 aa6.87□□□□□ -1.31
TRAPPC12-221ENST00000489032 RBM38Q9H0Z9 239 aaKnown RBP6.87□□□□□ -1.31
TRAPPC12-221ENST00000489032 AAMDCQ9H7C9 122 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms