RNA–Protein interactions for RNA: ENST00000487496.1

SPEN-205, Transcript of spen family transcriptional repressor, humanhuman

TSL 1 (best)

Gene SPEN, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-205ENST00000487496 RIDAP52758 137 aaKnown RBP9.51□□□□□ -0.89
SPEN-205ENST00000487496 CXCR4P61073 352 aa9.51□□□□□ -0.89
SPEN-205ENST00000487496 CD276Q5ZPR3 534 aa9.51□□□□□ -0.89
SPEN-205ENST00000487496 RBMS3Q6XE24 437 aaKnown RBP9.51□□□□□ -0.89
SPEN-205ENST00000487496 DOK3Q7L591 496 aa9.51□□□□□ -0.89
SPEN-205ENST00000487496 KRT74Q7RTS7 529 aa9.51□□□□□ -0.89
SPEN-205ENST00000487496 SLC35F2Q8IXU6 374 aa9.51□□□□□ -0.89
SPEN-205ENST00000487496 HPSE2Q8WWQ2 592 aa9.51□□□□□ -0.89
SPEN-205ENST00000487496 PYDC1Q8WXC3 89 aa9.51□□□□□ -0.89
SPEN-205ENST00000487496 PPP1R14AQ96A00 147 aa9.51□□□□□ -0.89
SPEN-205ENST00000487496 RNF170Q96K19 258 aa9.51□□□□□ -0.89
SPEN-205ENST00000487496 MNTQ99583 582 aa9.51□□□□□ -0.89
SPEN-205ENST00000487496 OSBPL10Q9BXB5 764 aa9.51□□□□□ -0.89
SPEN-205ENST00000487496 FGF23Q9GZV9 251 aaPredicted RBP9.51□□□□□ -0.89
SPEN-205ENST00000487496 RASSF4Q9H2L5 321 aa9.51□□□□□ -0.89
SPEN-205ENST00000487496 ABCB9Q9NP78 766 aa9.51□□□□□ -0.89
SPEN-205ENST00000487496 GPR84Q9NQS5 396 aa9.51□□□□□ -0.89
SPEN-205ENST00000487496 KAAG1Q9UBP8 84 aa9.51□□□□□ -0.89
SPEN-205ENST00000487496 IKZF2Q9UKS7 526 aa9.51□□□□□ -0.89
SPEN-205ENST00000487496 DOCK11Q5JSL3 2073 aa9.51□□□□□ -0.89
SPEN-205ENST00000487496 ZNF816-ZNF321PA0A0X1KG74 233 aa9.5□□□□□ -0.89
SPEN-205ENST00000487496 SAC3D1A6NKF1 404 aa9.5□□□□□ -0.89
SPEN-205ENST00000487496 TMEM210A6NLX4 147 aa9.5□□□□□ -0.89
SPEN-205ENST00000487496 POM121CA8CG34 1229 aa9.5□□□□□ -0.89
SPEN-205ENST00000487496 SRRM5B3KS81 715 aa9.5□□□□□ -0.89
SPEN-205ENST00000487496 TMPRSS2O15393 492 aa9.5□□□□□ -0.89
SPEN-205ENST00000487496 MAGEB4O15481 346 aaPredicted RBP9.5□□□□□ -0.89
SPEN-205ENST00000487496 SRSF10O75494 262 aaKnown RBP9.5□□□□□ -0.89
SPEN-205ENST00000487496 FCN3O75636 299 aa9.5□□□□□ -0.89
SPEN-205ENST00000487496 LIPFP07098 398 aa9.5□□□□□ -0.89
SPEN-205ENST00000487496 MUC1P15941 1255 aaPredicted RBP9.5□□□□□ -0.89
SPEN-205ENST00000487496 MAP2K3P46734 347 aa9.5□□□□□ -0.89
SPEN-205ENST00000487496 ACTR3P61158 418 aa9.5□□□□□ -0.89
SPEN-205ENST00000487496 FGF12P61328 243 aa9.5□□□□□ -0.89
SPEN-205ENST00000487496 ELF3P78545 371 aaPredicted RBP9.5□□□□□ -0.89
SPEN-205ENST00000487496 EGR3Q06889 387 aa9.5□□□□□ -0.89
SPEN-205ENST00000487496 MFGE8Q08431 387 aaPredicted RBP9.5□□□□□ -0.89
SPEN-205ENST00000487496 MICBQ29980 383 aa9.5□□□□□ -0.89
SPEN-205ENST00000487496 ZNF829Q3KNS6 432 aaPredicted RBP9.5□□□□□ -0.89
SPEN-205ENST00000487496 FAM76BQ5HYJ3 339 aa9.5□□□□□ -0.89
SPEN-205ENST00000487496 CCDC121Q6ZUS5 278 aa9.5□□□□□ -0.89
SPEN-205ENST00000487496 KCTD8Q6ZWB6 473 aa9.5□□□□□ -0.89
SPEN-205ENST00000487496 GID4Q8IVV7 300 aa9.5□□□□□ -0.89
SPEN-205ENST00000487496 ZDHHC23Q8IYP9 409 aa9.5□□□□□ -0.89
SPEN-205ENST00000487496 OR10Z1Q8NGY1 313 aa9.5□□□□□ -0.89
SPEN-205ENST00000487496 FAM81AQ8TBF8 368 aa9.5□□□□□ -0.89
SPEN-205ENST00000487496 OR51E1Q8TCB6 317 aa9.5□□□□□ -0.89
SPEN-205ENST00000487496 RPL3LQ92901 407 aaKnown RBP9.5□□□□□ -0.89
SPEN-205ENST00000487496 ITFG2Q969R8 447 aa9.5□□□□□ -0.89
SPEN-205ENST00000487496 SEH1LQ96EE3 360 aa9.5□□□□□ -0.89
SPEN-205ENST00000487496 ZNF48Q96MX3 618 aaPredicted RBP9.5□□□□□ -0.89
SPEN-205ENST00000487496 HIST1H2AAQ96QV6 131 aa9.5□□□□□ -0.89
SPEN-205ENST00000487496 CCL13Q99616 98 aa9.5□□□□□ -0.89
SPEN-205ENST00000487496 APOL4Q9BPW4 351 aa9.5□□□□□ -0.89
SPEN-205ENST00000487496 RBM4BQ9BQ04 359 aaKnown RBP9.5□□□□□ -0.89
SPEN-205ENST00000487496 GABARAPL3Q9BY60 117 aa9.5□□□□□ -0.89
SPEN-205ENST00000487496 MS4A7Q9GZW8 240 aaPredicted RBP9.5□□□□□ -0.89
SPEN-205ENST00000487496 RIBC2Q9H4K1 309 aa9.5□□□□□ -0.89
SPEN-205ENST00000487496 CLN6Q9NWW5 311 aa9.5□□□□□ -0.89
SPEN-205ENST00000487496 NUFIP1Q9UHK0 495 aaKnown RBP9.5□□□□□ -0.89
SPEN-205ENST00000487496 SOX21Q9Y651 276 aaPredicted RBP9.5□□□□□ -0.89
SPEN-205ENST00000487496 TRAV40A0A0B4J280 105 aa9.49□□□□□ -0.89
SPEN-205ENST00000487496 A0A1B0GW55 424 aa9.49□□□□□ -0.89
SPEN-205ENST00000487496 TMEM89A2RUT3 159 aa9.49□□□□□ -0.89
SPEN-205ENST00000487496 ZNF879B4DU55 563 aa9.49□□□□□ -0.89
SPEN-205ENST00000487496 ZNF670-ZNF695F2Z2N8 137 aa9.49□□□□□ -0.89
SPEN-205ENST00000487496 H3BNX3 289 aa9.49□□□□□ -0.89
SPEN-205ENST00000487496 DVL1O14640 695 aa9.49□□□□□ -0.89
SPEN-205ENST00000487496 PLATP00750 562 aa9.49□□□□□ -0.89
SPEN-205ENST00000487496 TTRP02766 147 aa9.49□□□□□ -0.89
SPEN-205ENST00000487496 DUX4L2P0CJ85 424 aa9.49□□□□□ -0.89
SPEN-205ENST00000487496 DUX4L3P0CJ86 424 aa9.49□□□□□ -0.89
SPEN-205ENST00000487496 DUX4L4P0CJ87 422 aa9.49□□□□□ -0.89
SPEN-205ENST00000487496 DUX4L5P0CJ88 424 aa9.49□□□□□ -0.89
SPEN-205ENST00000487496 DUX4L6P0CJ89 424 aa9.49□□□□□ -0.89
SPEN-205ENST00000487496 DUX4L7P0CJ90 424 aa9.49□□□□□ -0.89
SPEN-205ENST00000487496 ATP6V1B1P15313 513 aa9.49□□□□□ -0.89
SPEN-205ENST00000487496 AMY2BP19961 511 aa9.49□□□□□ -0.89
SPEN-205ENST00000487496 HTR1FP30939 366 aa9.49□□□□□ -0.89
SPEN-205ENST00000487496 UBA52P62987 128 aaKnown RBP9.49□□□□□ -0.89
SPEN-205ENST00000487496 ACTG1P63261 375 aa9.49□□□□□ -0.89
SPEN-205ENST00000487496 RIPPLY1Q0D2K3 151 aa9.49□□□□□ -0.89
SPEN-205ENST00000487496 KPNB1Q14974 876 aaKnown RBP9.49□□□□□ -0.89
SPEN-205ENST00000487496 C11orf91Q3C1V1 193 aa9.49□□□□□ -0.89
SPEN-205ENST00000487496 WDR38Q5JTN6 314 aa9.49□□□□□ -0.89
SPEN-205ENST00000487496 CEP78Q5JTW2 689 aa9.49□□□□□ -0.89
SPEN-205ENST00000487496 DUX4L9Q6RFH8 374 aaPredicted RBP9.49□□□□□ -0.89
SPEN-205ENST00000487496 C12orf54Q6X4T0 127 aa9.49□□□□□ -0.89
SPEN-205ENST00000487496 PLEKHG7Q6ZR37 379 aa9.49□□□□□ -0.89
SPEN-205ENST00000487496 C9orf139Q6ZV77 190 aa9.49□□□□□ -0.89
SPEN-205ENST00000487496 COMMD2Q86X83 199 aa9.49□□□□□ -0.89
SPEN-205ENST00000487496 SCCPDHQ8NBX0 429 aa9.49□□□□□ -0.89
SPEN-205ENST00000487496 OR51G2Q8NGK0 314 aa9.49□□□□□ -0.89
SPEN-205ENST00000487496 OR8J1Q8NGP2 316 aa9.49□□□□□ -0.89
SPEN-205ENST00000487496 C12orf43Q96C57 262 aaKnown RBP9.49□□□□□ -0.89
SPEN-205ENST00000487496 FAM71F1Q96KD3 344 aaPredicted RBP9.49□□□□□ -0.89
SPEN-205ENST00000487496 WDR13Q9H1Z4 485 aa9.49□□□□□ -0.89
SPEN-205ENST00000487496 DUX4Q9UBX2 424 aa9.49□□□□□ -0.89
SPEN-205ENST00000487496 WARS2Q9UGM6 360 aaKnown RBP9.49□□□□□ -0.89
SPEN-205ENST00000487496 MRM2Q9UI43 246 aaKnown RBP9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms