RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 UBAP1Q9NZ09 502 aa3.28□□□□□ -1.88
SNRNP40-205ENST00000486941 IL20RAQ9UHF4 553 aa3.28□□□□□ -1.88
SNRNP40-205ENST00000486941 SLC7A7Q9UM01 511 aa3.28□□□□□ -1.88
SNRNP40-205ENST00000486941 ANGPT4Q9Y264 503 aa3.28□□□□□ -1.88
SNRNP40-205ENST00000486941 UGT2A1Q9Y4X1 527 aa3.28□□□□□ -1.88
SNRNP40-205ENST00000486941 PCDHGB5Q9Y5G0 923 aa3.28□□□□□ -1.88
SNRNP40-205ENST00000486941 TIMM10BQ9Y5J6 103 aa3.28□□□□□ -1.88
SNRNP40-205ENST00000486941 USH1CQ9Y6N9 552 aa3.28□□□□□ -1.88
SNRNP40-205ENST00000486941 HTR3EA5X5Y0 456 aa3.27□□□□□ -1.89
SNRNP40-205ENST00000486941 CPSF4LA6NMK7 179 aaKnown RBP3.27□□□□□ -1.89
SNRNP40-205ENST00000486941 F5H0A9 414 aaPredicted RBP3.27□□□□□ -1.89
SNRNP40-205ENST00000486941 KPNA4O00629 521 aaPredicted RBP3.27□□□□□ -1.89
SNRNP40-205ENST00000486941 SURF4O15260 269 aa3.27□□□□□ -1.89
SNRNP40-205ENST00000486941 POLR3GO15318 223 aaPredicted RBP3.27□□□□□ -1.89
SNRNP40-205ENST00000486941 TIPRLO75663 272 aa3.27□□□□□ -1.89
SNRNP40-205ENST00000486941 NDUFB4O95168 129 aa3.27□□□□□ -1.89
SNRNP40-205ENST00000486941 SLC2A10O95528 541 aa3.27□□□□□ -1.89
SNRNP40-205ENST00000486941 FSTL3O95633 263 aa3.27□□□□□ -1.89
SNRNP40-205ENST00000486941 NGFP01138 241 aa3.27□□□□□ -1.89
SNRNP40-205ENST00000486941 MT-ND1P03886 318 aa3.27□□□□□ -1.89
SNRNP40-205ENST00000486941 CST2P09228 141 aa3.27□□□□□ -1.89
SNRNP40-205ENST00000486941 WNT2P09544 360 aa3.27□□□□□ -1.89
SNRNP40-205ENST00000486941 COX5BP10606 129 aa3.27□□□□□ -1.89
SNRNP40-205ENST00000486941 UMPSP11172 480 aa3.27□□□□□ -1.89
SNRNP40-205ENST00000486941 KITLGP21583 273 aa3.27□□□□□ -1.89
SNRNP40-205ENST00000486941 CDAP32320 146 aa3.27□□□□□ -1.89
SNRNP40-205ENST00000486941 CD80P33681 288 aa3.27□□□□□ -1.89
SNRNP40-205ENST00000486941 MDH2P40926 338 aaKnown RBP3.27□□□□□ -1.89
SNRNP40-205ENST00000486941 AQP2P41181 271 aa3.27□□□□□ -1.89
SNRNP40-205ENST00000486941 RBM34P42696 430 aaKnown RBP3.27□□□□□ -1.89
SNRNP40-205ENST00000486941 GUCA1AP43080 201 aaPredicted RBP3.27□□□□□ -1.89
SNRNP40-205ENST00000486941 DAP3P51398 398 aaKnown RBP3.27□□□□□ -1.89
SNRNP40-205ENST00000486941 BPIFB3P59826 476 aa3.27□□□□□ -1.89
SNRNP40-205ENST00000486941 PCBD1P61457 104 aa3.27□□□□□ -1.89
SNRNP40-205ENST00000486941 BTG1P62324 171 aa3.27□□□□□ -1.89
SNRNP40-205ENST00000486941 ERVK-25P63136 954 aa3.27□□□□□ -1.89
SNRNP40-205ENST00000486941 TNFAIP6P98066 277 aaPredicted RBP3.27□□□□□ -1.89
SNRNP40-205ENST00000486941 PAX2Q02962 417 aa3.27□□□□□ -1.89
SNRNP40-205ENST00000486941 PSG7Q13046 419 aa3.27□□□□□ -1.89
SNRNP40-205ENST00000486941 ZMYND11Q15326 602 aa3.27□□□□□ -1.89
SNRNP40-205ENST00000486941 SPRNQ5BIV9 151 aa3.27□□□□□ -1.89
SNRNP40-205ENST00000486941 SPATA46Q5T0L3 261 aa3.27□□□□□ -1.89
SNRNP40-205ENST00000486941 ARMC4Q5T2S8 1044 aa3.27□□□□□ -1.89
SNRNP40-205ENST00000486941 INTS11Q5TA45 600 aaKnown RBP3.27□□□□□ -1.89
SNRNP40-205ENST00000486941 ZC2HC1BQ5TFG8 222 aa3.27□□□□□ -1.89
SNRNP40-205ENST00000486941 FAM205BPQ63HN1 556 aa3.27□□□□□ -1.89
SNRNP40-205ENST00000486941 HIST2H2BDQ6DRA6 164 aa3.27□□□□□ -1.89
SNRNP40-205ENST00000486941 C16orf87Q6PH81 154 aa3.27□□□□□ -1.89
SNRNP40-205ENST00000486941 ARL9Q6T311 187 aa3.27□□□□□ -1.89
SNRNP40-205ENST00000486941 LRRN1Q6UXK5 716 aa3.27□□□□□ -1.89
SNRNP40-205ENST00000486941 RFPL4BQ6ZWI9 263 aa3.27□□□□□ -1.89
SNRNP40-205ENST00000486941 NANOGNBQ7Z5D8 188 aa3.27□□□□□ -1.89
SNRNP40-205ENST00000486941 PTOV1Q86YD1 416 aa3.27□□□□□ -1.89
SNRNP40-205ENST00000486941 RBM45Q8IUH3 476 aaKnown RBP3.27□□□□□ -1.89
SNRNP40-205ENST00000486941 SLC30A8Q8IWU4 369 aa3.27□□□□□ -1.89
SNRNP40-205ENST00000486941 NPEPL1Q8NDH3 523 aa3.27□□□□□ -1.89
SNRNP40-205ENST00000486941 OR4D11Q8NGI4 311 aa3.27□□□□□ -1.89
SNRNP40-205ENST00000486941 OR52E2Q8NGJ4 325 aa3.27□□□□□ -1.89
SNRNP40-205ENST00000486941 AKR7LQ8NHP1 331 aa3.27□□□□□ -1.89
SNRNP40-205ENST00000486941 RASSF5Q8WWW0 418 aa3.27□□□□□ -1.89
SNRNP40-205ENST00000486941 GEMIN6Q8WXD5 167 aaKnown RBP3.27□□□□□ -1.89
SNRNP40-205ENST00000486941 PTP4A1Q93096 173 aa3.27□□□□□ -1.89
SNRNP40-205ENST00000486941 TMIGD2Q96BF3 282 aa3.27□□□□□ -1.89
SNRNP40-205ENST00000486941 UPRTQ96BW1 309 aa3.27□□□□□ -1.89
SNRNP40-205ENST00000486941 HAVCR1Q96D42 359 aa3.27□□□□□ -1.89
SNRNP40-205ENST00000486941 SGTBQ96EQ0 304 aa3.27□□□□□ -1.89
SNRNP40-205ENST00000486941 C4orf45Q96LM5 186 aa3.27□□□□□ -1.89
SNRNP40-205ENST00000486941 MAGEB18Q96M61 343 aa3.27□□□□□ -1.89
SNRNP40-205ENST00000486941 C7orf26Q96N11 449 aa3.27□□□□□ -1.89
SNRNP40-205ENST00000486941 ALG12Q9BV10 488 aa3.27□□□□□ -1.89
SNRNP40-205ENST00000486941 PARD6BQ9BYG5 372 aa3.27□□□□□ -1.89
SNRNP40-205ENST00000486941 OR2H1Q9GZK4 316 aa3.27□□□□□ -1.89
SNRNP40-205ENST00000486941 POLR2J2Q9GZM3 115 aaKnown RBP3.27□□□□□ -1.89
SNRNP40-205ENST00000486941 POLR2J3Q9H1A7 115 aaKnown RBP3.27□□□□□ -1.89
SNRNP40-205ENST00000486941 WNT5BQ9H1J7 359 aa3.27□□□□□ -1.89
SNRNP40-205ENST00000486941 TXNIPQ9H3M7 391 aa3.27□□□□□ -1.89
SNRNP40-205ENST00000486941 RABEP2Q9H5N1 569 aa3.27□□□□□ -1.89
SNRNP40-205ENST00000486941 NANOGQ9H9S0 305 aa3.27□□□□□ -1.89
SNRNP40-205ENST00000486941 MAN2C1Q9NTJ4 1040 aa3.27□□□□□ -1.89
SNRNP40-205ENST00000486941 DCAF16Q9NXF7 216 aa3.27□□□□□ -1.89
SNRNP40-205ENST00000486941 NKIRAS1Q9NYS0 192 aa3.27□□□□□ -1.89
SNRNP40-205ENST00000486941 CCDC167Q9P0B6 97 aa3.27□□□□□ -1.89
SNRNP40-205ENST00000486941 OR5V1Q9UGF6 321 aa3.27□□□□□ -1.89
SNRNP40-205ENST00000486941 IL19Q9UHD0 177 aa3.27□□□□□ -1.89
SNRNP40-205ENST00000486941 IGKV1D-43A0A0B4J1Z2 117 aa3.26□□□□□ -1.89
SNRNP40-205ENST00000486941 KIR2DS1A0A191URI9 304 aa3.26□□□□□ -1.89
SNRNP40-205ENST00000486941 A6NIZ1 184 aa3.26□□□□□ -1.89
SNRNP40-205ENST00000486941 CEACAM18A8MTB9 384 aa3.26□□□□□ -1.89
SNRNP40-205ENST00000486941 C12orf71A8MTZ7 269 aa3.26□□□□□ -1.89
SNRNP40-205ENST00000486941 SRRM5B3KS81 715 aa3.26□□□□□ -1.89
SNRNP40-205ENST00000486941 TMEM178BH3BS89 294 aa3.26□□□□□ -1.89
SNRNP40-205ENST00000486941 TIMM8AO60220 97 aaPredicted RBP3.26□□□□□ -1.89
SNRNP40-205ENST00000486941 OR7A10O76100 309 aa3.26□□□□□ -1.89
SNRNP40-205ENST00000486941 OR5F1O95221 314 aa3.26□□□□□ -1.89
SNRNP40-205ENST00000486941 OPN1SWP03999 348 aa3.26□□□□□ -1.89
SNRNP40-205ENST00000486941 IGHV4-38-2P0DP08 117 aa3.26□□□□□ -1.89
SNRNP40-205ENST00000486941 THRBP10828 461 aa3.26□□□□□ -1.89
SNRNP40-205ENST00000486941 MYOD1P15172 320 aa3.26□□□□□ -1.89
SNRNP40-205ENST00000486941 GSTM3P21266 225 aa3.26□□□□□ -1.89
SNRNP40-205ENST00000486941 MDKP21741 143 aaPredicted RBP3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms