RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 MAB21L1Q13394 359 aa4.85□□□□□ -1.63
CSDE1-207ENST00000483407 GK2Q14410 553 aaPredicted RBP4.85□□□□□ -1.63
CSDE1-207ENST00000483407 OR8G1Q15617 311 aa4.85□□□□□ -1.63
CSDE1-207ENST00000483407 OR8B8Q15620 311 aa4.85□□□□□ -1.63
CSDE1-207ENST00000483407 SLC36A3Q495N2 470 aa4.85□□□□□ -1.63
CSDE1-207ENST00000483407 CLEC12AQ5QGZ9 265 aa4.85□□□□□ -1.63
CSDE1-207ENST00000483407 HIST2H3PS2Q5TEC6 136 aa4.85□□□□□ -1.63
CSDE1-207ENST00000483407 PRAMEF6Q5VXH4 476 aa4.85□□□□□ -1.63
CSDE1-207ENST00000483407 ASPHD2Q6ICH7 369 aa4.85□□□□□ -1.63
CSDE1-207ENST00000483407 CORO6Q6QEF8 472 aa4.85□□□□□ -1.63
CSDE1-207ENST00000483407 TBPL2Q6SJ96 375 aa4.85□□□□□ -1.63
CSDE1-207ENST00000483407 ZNF841Q6ZN19 808 aa4.85□□□□□ -1.63
CSDE1-207ENST00000483407 DPY19L2P2Q6ZN68 376 aa4.85□□□□□ -1.63
CSDE1-207ENST00000483407 GDPGP1Q6ZNW5 385 aa4.85□□□□□ -1.63
CSDE1-207ENST00000483407 COLCA1Q6ZS62 124 aa4.85□□□□□ -1.63
CSDE1-207ENST00000483407 HIST2H3AQ71DI3 136 aa4.85□□□□□ -1.63
CSDE1-207ENST00000483407 RHOUQ7L0Q8 258 aa4.85□□□□□ -1.63
CSDE1-207ENST00000483407 VTCN1Q7Z7D3 282 aa4.85□□□□□ -1.63
CSDE1-207ENST00000483407 BOLLQ8N9W6 283 aaKnown RBP4.85□□□□□ -1.63
CSDE1-207ENST00000483407 SPERTQ8NA61 448 aa4.85□□□□□ -1.63
CSDE1-207ENST00000483407 C19orf18Q8NEA5 215 aa4.85□□□□□ -1.63
CSDE1-207ENST00000483407 OR2AJ1Q8NGZ0 328 aa4.85□□□□□ -1.63
CSDE1-207ENST00000483407 LINC01006Q8NI28 216 aa4.85□□□□□ -1.63
CSDE1-207ENST00000483407 LHX4Q969G2 390 aa4.85□□□□□ -1.63
CSDE1-207ENST00000483407 RSRC1Q96IZ7 334 aaKnown RBP4.85□□□□□ -1.63
CSDE1-207ENST00000483407 WDFY2Q96P53 400 aa4.85□□□□□ -1.63
CSDE1-207ENST00000483407 PITX2Q99697 317 aa4.85□□□□□ -1.63
CSDE1-207ENST00000483407 ATF6BQ99941 703 aa4.85□□□□□ -1.63
CSDE1-207ENST00000483407 UFSP2Q9NUQ7 469 aa4.85□□□□□ -1.63
CSDE1-207ENST00000483407 ARMCX1Q9P291 453 aa4.85□□□□□ -1.63
CSDE1-207ENST00000483407 NKX1-2Q9UD57 310 aaPredicted RBP4.85□□□□□ -1.63
CSDE1-207ENST00000483407 AURKCQ9UQB9 309 aa4.85□□□□□ -1.63
CSDE1-207ENST00000483407 SIGLEC7Q9Y286 467 aa4.85□□□□□ -1.63
CSDE1-207ENST00000483407 CAB39Q9Y376 341 aaPredicted RBP4.85□□□□□ -1.63
CSDE1-207ENST00000483407 FAM96BQ9Y3D0 163 aa4.85□□□□□ -1.63
CSDE1-207ENST00000483407 IER3IP1Q9Y5U9 82 aa4.85□□□□□ -1.63
CSDE1-207ENST00000483407 LHFPL6Q9Y693 200 aa4.85□□□□□ -1.63
CSDE1-207ENST00000483407 ENPP4Q9Y6X5 453 aa4.85□□□□□ -1.63
CSDE1-207ENST00000483407 TANC2Q9HCD6 1990 aa4.84□□□□□ -1.63
CSDE1-207ENST00000483407 A0A1B0GVI7 797 aa4.84□□□□□ -1.63
CSDE1-207ENST00000483407 hCG_1807616A0A1W2PRN6 198 aa4.84□□□□□ -1.63
CSDE1-207ENST00000483407 A0A1W2PRQ8 180 aa4.84□□□□□ -1.63
CSDE1-207ENST00000483407 OOEPA6NGQ2 149 aa4.84□□□□□ -1.63
CSDE1-207ENST00000483407 GGT3PA6NGU5 568 aa4.84□□□□□ -1.63
CSDE1-207ENST00000483407 A6NLC8 198 aa4.84□□□□□ -1.63
CSDE1-207ENST00000483407 CD300LBA8K4G0 201 aa4.84□□□□□ -1.63
CSDE1-207ENST00000483407 M0R135 149 aa4.84□□□□□ -1.63
CSDE1-207ENST00000483407 CXCR6O00574 342 aa4.84□□□□□ -1.63
CSDE1-207ENST00000483407 NDUFAB1O14561 156 aa4.84□□□□□ -1.63
CSDE1-207ENST00000483407 GMDSO60547 372 aa4.84□□□□□ -1.63
CSDE1-207ENST00000483407 PTP4A3O75365 173 aa4.84□□□□□ -1.63
CSDE1-207ENST00000483407 SPDEFO95238 335 aa4.84□□□□□ -1.63
CSDE1-207ENST00000483407 TXNDC12O95881 172 aa4.84□□□□□ -1.63
CSDE1-207ENST00000483407 SERPINA1P01009 418 aa4.84□□□□□ -1.63
CSDE1-207ENST00000483407 IGHV4-59P01825 116 aa4.84□□□□□ -1.63
CSDE1-207ENST00000483407 HLA-DQA2P01906 255 aa4.84□□□□□ -1.63
CSDE1-207ENST00000483407 H1F0P07305 194 aaKnown RBP4.84□□□□□ -1.63
CSDE1-207ENST00000483407 ACSM4P0C7M7 580 aa4.84□□□□□ -1.63
CSDE1-207ENST00000483407 MMP9P14780 707 aa4.84□□□□□ -1.63
CSDE1-207ENST00000483407 CA6P23280 308 aa4.84□□□□□ -1.63
CSDE1-207ENST00000483407 CDKN2AP42771 156 aaKnown RBP4.84□□□□□ -1.63
CSDE1-207ENST00000483407 TPTEP56180 551 aa4.84□□□□□ -1.63
CSDE1-207ENST00000483407 PROK1P58294 105 aa4.84□□□□□ -1.63
CSDE1-207ENST00000483407 ARF6P62330 175 aa4.84□□□□□ -1.63
CSDE1-207ENST00000483407 TRAP1Q12931 704 aaKnown RBP4.84□□□□□ -1.63
CSDE1-207ENST00000483407 DGCR6Q14129 220 aa4.84□□□□□ -1.63
CSDE1-207ENST00000483407 MPPED2Q15777 294 aa4.84□□□□□ -1.63
CSDE1-207ENST00000483407 MEP1BQ16820 701 aa4.84□□□□□ -1.63
CSDE1-207ENST00000483407 C2orf68Q2NKX9 166 aa4.84□□□□□ -1.63
CSDE1-207ENST00000483407 FGD3Q5JSP0 725 aa4.84□□□□□ -1.63
CSDE1-207ENST00000483407 DHRS7BQ6IAN0 325 aaPredicted RBP4.84□□□□□ -1.63
CSDE1-207ENST00000483407 SMARCD3Q6STE5 483 aa4.84□□□□□ -1.63
CSDE1-207ENST00000483407 PTCHD4Q6ZW05 846 aa4.84□□□□□ -1.63
CSDE1-207ENST00000483407 LDLRAD3Q86YD5 345 aa4.84□□□□□ -1.63
CSDE1-207ENST00000483407 LNX2Q8N448 690 aa4.84□□□□□ -1.63
CSDE1-207ENST00000483407 C11orf44Q8N8P7 122 aa4.84□□□□□ -1.63
CSDE1-207ENST00000483407 SLC26A10Q8NG04 563 aa4.84□□□□□ -1.63
CSDE1-207ENST00000483407 IL17DQ8TAD2 202 aa4.84□□□□□ -1.63
CSDE1-207ENST00000483407 SLC7A13Q8TCU3 470 aa4.84□□□□□ -1.63
CSDE1-207ENST00000483407 SPTSSAQ969W0 71 aa4.84□□□□□ -1.63
CSDE1-207ENST00000483407 FAM162AQ96A26 154 aa4.84□□□□□ -1.63
CSDE1-207ENST00000483407 SLCO4A1Q96BD0 722 aa4.84□□□□□ -1.63
CSDE1-207ENST00000483407 ZNF799Q96GE5 643 aa4.84□□□□□ -1.63
CSDE1-207ENST00000483407 TSSK2Q96PF2 358 aa4.84□□□□□ -1.63
CSDE1-207ENST00000483407 ERMAPQ96PL5 475 aaPredicted RBP4.84□□□□□ -1.63
CSDE1-207ENST00000483407 TBX15Q96SF7 602 aa4.84□□□□□ -1.63
CSDE1-207ENST00000483407 ADAT1Q9BUB4 502 aaKnown RBP4.84□□□□□ -1.63
CSDE1-207ENST00000483407 SIRPDQ9H106 197 aa4.84□□□□□ -1.63
CSDE1-207ENST00000483407 SAR1AQ9NR31 198 aa4.84□□□□□ -1.63
CSDE1-207ENST00000483407 MRPL15Q9P015 296 aaKnown RBP4.84□□□□□ -1.63
CSDE1-207ENST00000483407 NDUFAF4Q9P032 175 aa4.84□□□□□ -1.63
CSDE1-207ENST00000483407 CTSZQ9UBR2 303 aa4.84□□□□□ -1.63
CSDE1-207ENST00000483407 STEAP1Q9UHE8 339 aa4.84□□□□□ -1.63
CSDE1-207ENST00000483407 B9D1Q9UPM9 204 aa4.84□□□□□ -1.63
CSDE1-207ENST00000483407 KPTNQ9Y664 436 aa4.84□□□□□ -1.63
CSDE1-207ENST00000483407 CAPN7Q9Y6W3 813 aa4.84□□□□□ -1.63
CSDE1-207ENST00000483407 IGLV1-36A0A0B4J1U3 117 aa4.83□□□□□ -1.64
CSDE1-207ENST00000483407 A0A0U1RQK1 487 aa4.83□□□□□ -1.64
CSDE1-207ENST00000483407 C5orf63A6NC05 138 aa4.83□□□□□ -1.64
CSDE1-207ENST00000483407 UNC119BA6NIH7 251 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms