RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 ASB17Q8WXJ9 295 aa3.39□□□□□ -1.87
VPS41-212ENST00000482217 EEF1AKMT3Q96AZ1 226 aa3.39□□□□□ -1.87
VPS41-212ENST00000482217 FGGYQ96C11 551 aa3.39□□□□□ -1.87
VPS41-212ENST00000482217 C12orf43Q96C57 262 aaKnown RBP3.39□□□□□ -1.87
VPS41-212ENST00000482217 HAUS1Q96CS2 278 aa3.39□□□□□ -1.87
VPS41-212ENST00000482217 FOPNLQ96NB1 174 aa3.39□□□□□ -1.87
VPS41-212ENST00000482217 SORT1Q99523 831 aa3.39□□□□□ -1.87
VPS41-212ENST00000482217 KIFC1Q9BW19 673 aa3.39□□□□□ -1.87
VPS41-212ENST00000482217 CCDC90BQ9GZT6 254 aa3.39□□□□□ -1.87
VPS41-212ENST00000482217 ZNF385DQ9H6B1 395 aa3.39□□□□□ -1.87
VPS41-212ENST00000482217 C6orf106Q9H6K1 298 aaPredicted RBP3.39□□□□□ -1.87
VPS41-212ENST00000482217 ELL3Q9HB65 397 aaPredicted RBP3.39□□□□□ -1.87
VPS41-212ENST00000482217 ADGRL4Q9HBW9 690 aa3.39□□□□□ -1.87
VPS41-212ENST00000482217 OLFML3Q9NRN5 406 aa3.39□□□□□ -1.87
VPS41-212ENST00000482217 DDIT4Q9NX09 232 aa3.39□□□□□ -1.87
VPS41-212ENST00000482217 VPS29Q9UBQ0 182 aa3.39□□□□□ -1.87
VPS41-212ENST00000482217 ING4Q9UNL4 249 aa3.39□□□□□ -1.87
VPS41-212ENST00000482217 NTNG1Q9Y2I2 539 aa3.39□□□□□ -1.87
VPS41-212ENST00000482217 UTP11Q9Y3A2 253 aaKnown RBP3.39□□□□□ -1.87
VPS41-212ENST00000482217 OR2W1Q9Y3N9 320 aa3.39□□□□□ -1.87
VPS41-212ENST00000482217 PLEKHG1Q9ULL1 1385 aa3.38□□□□□ -1.87
VPS41-212ENST00000482217 MYH15Q9Y2K3 1946 aa3.38□□□□□ -1.87
VPS41-212ENST00000482217 PPIP5K1Q6PFW1 1433 aa3.38□□□□□ -1.87
VPS41-212ENST00000482217 IGHV4OR15-8A0A075B7B6 117 aa3.38□□□□□ -1.87
VPS41-212ENST00000482217 A0A0G2JNG1 304 aa3.38□□□□□ -1.87
VPS41-212ENST00000482217 ZCWPW2A0A1B0GU75 182 aa3.38□□□□□ -1.87
VPS41-212ENST00000482217 IGSF23A1L1A6 192 aa3.38□□□□□ -1.87
VPS41-212ENST00000482217 FAM159BA6NKW6 160 aa3.38□□□□□ -1.87
VPS41-212ENST00000482217 C15orf62A8K5M9 175 aa3.38□□□□□ -1.87
VPS41-212ENST00000482217 CEACAM18A8MTB9 384 aa3.38□□□□□ -1.87
VPS41-212ENST00000482217 PPP5D1E7EU14 171 aa3.38□□□□□ -1.87
VPS41-212ENST00000482217 SMKR1H3BMG3 65 aa3.38□□□□□ -1.87
VPS41-212ENST00000482217 H7C2Y5 167 aa3.38□□□□□ -1.87
VPS41-212ENST00000482217 CDC7O00311 574 aa3.38□□□□□ -1.87
VPS41-212ENST00000482217 TAAR5O14804 337 aa3.38□□□□□ -1.87
VPS41-212ENST00000482217 OR2B3O76000 313 aa3.38□□□□□ -1.87
VPS41-212ENST00000482217 SLC25A27O95847 323 aa3.38□□□□□ -1.87
VPS41-212ENST00000482217 GIPP09681 153 aaPredicted RBP3.38□□□□□ -1.87
VPS41-212ENST00000482217 OR10J4P0C629 311 aa3.38□□□□□ -1.87
VPS41-212ENST00000482217 FAM106CPP0CH98 169 aa3.38□□□□□ -1.87
VPS41-212ENST00000482217 COX4I1P13073 169 aa3.38□□□□□ -1.87
VPS41-212ENST00000482217 FOLR1P15328 257 aa3.38□□□□□ -1.87
VPS41-212ENST00000482217 OGNP20774 298 aaKnown RBP3.38□□□□□ -1.87
VPS41-212ENST00000482217 TALDO1P37837 337 aa3.38□□□□□ -1.87
VPS41-212ENST00000482217 PTGDSP41222 190 aa3.38□□□□□ -1.87
VPS41-212ENST00000482217 OR3A4PP47883 348 aa3.38□□□□□ -1.87
VPS41-212ENST00000482217 OR1D4P47884 311 aa3.38□□□□□ -1.87
VPS41-212ENST00000482217 TFPI2P48307 235 aa3.38□□□□□ -1.87
VPS41-212ENST00000482217 SSR4P51571 173 aa3.38□□□□□ -1.87
VPS41-212ENST00000482217 EFNA3P52797 238 aa3.38□□□□□ -1.87
VPS41-212ENST00000482217 GNG2P59768 71 aa3.38□□□□□ -1.87
VPS41-212ENST00000482217 RAB2AP61019 212 aa3.38□□□□□ -1.87
VPS41-212ENST00000482217 BTN3A2P78410 334 aa3.38□□□□□ -1.87
VPS41-212ENST00000482217 IFITM2Q01629 132 aa3.38□□□□□ -1.87
VPS41-212ENST00000482217 SLC25A11Q02978 314 aaKnown RBP3.38□□□□□ -1.87
VPS41-212ENST00000482217 POU3F1Q03052 451 aaPredicted RBP3.38□□□□□ -1.87
VPS41-212ENST00000482217 ST3GAL4Q11206 333 aa3.38□□□□□ -1.87
VPS41-212ENST00000482217 KIAA0141Q14154 515 aaPredicted RBP3.38□□□□□ -1.87
VPS41-212ENST00000482217 TFDP2Q14188 446 aa3.38□□□□□ -1.87
VPS41-212ENST00000482217 EIF2B1Q14232 305 aaKnown RBP3.38□□□□□ -1.87
VPS41-212ENST00000482217 KIR2DS5Q14953 304 aa3.38□□□□□ -1.87
VPS41-212ENST00000482217 CD226Q15762 336 aa3.38□□□□□ -1.87
VPS41-212ENST00000482217 MPPED2Q15777 294 aa3.38□□□□□ -1.87
VPS41-212ENST00000482217 LRRC26Q2I0M4 334 aa3.38□□□□□ -1.87
VPS41-212ENST00000482217 CEACAM21Q3KPI0 293 aa3.38□□□□□ -1.87
VPS41-212ENST00000482217 LIN52Q52LA3 116 aa3.38□□□□□ -1.87
VPS41-212ENST00000482217 TMEM97Q5BJF2 176 aa3.38□□□□□ -1.87
VPS41-212ENST00000482217 ACSBG2Q5FVE4 666 aa3.38□□□□□ -1.87
VPS41-212ENST00000482217 SIRPB2Q5JXA9 342 aa3.38□□□□□ -1.87
VPS41-212ENST00000482217 VAX1Q5SQQ9 334 aa3.38□□□□□ -1.87
VPS41-212ENST00000482217 C1orf195Q5TG92 126 aa3.38□□□□□ -1.87
VPS41-212ENST00000482217 C9orf57Q5W0N0 161 aa3.38□□□□□ -1.87
VPS41-212ENST00000482217 PVRIGQ6DKI7 326 aa3.38□□□□□ -1.87
VPS41-212ENST00000482217 SFXN4Q6P4A7 337 aa3.38□□□□□ -1.87
VPS41-212ENST00000482217 TRIM40Q6P9F5 258 aa3.38□□□□□ -1.87
VPS41-212ENST00000482217 TMEM205Q6UW68 189 aa3.38□□□□□ -1.87
VPS41-212ENST00000482217 WDR82Q6UXN9 313 aa3.38□□□□□ -1.87
VPS41-212ENST00000482217 ZBTB8OSQ8IWT0 167 aa3.38□□□□□ -1.87
VPS41-212ENST00000482217 OR4N5Q8IXE1 308 aa3.38□□□□□ -1.87
VPS41-212ENST00000482217 SLC35F6Q8N357 371 aa3.38□□□□□ -1.87
VPS41-212ENST00000482217 BPIFB2Q8N4F0 458 aa3.38□□□□□ -1.87
VPS41-212ENST00000482217 GVQW1Q8N7I0 195 aa3.38□□□□□ -1.87
VPS41-212ENST00000482217 ZFP41Q8N8Y5 198 aa3.38□□□□□ -1.87
VPS41-212ENST00000482217 ACOT4Q8N9L9 421 aa3.38□□□□□ -1.87
VPS41-212ENST00000482217 ZNF740Q8NDX6 193 aa3.38□□□□□ -1.87
VPS41-212ENST00000482217 KLHDC9Q8NEP7 349 aa3.38□□□□□ -1.87
VPS41-212ENST00000482217 OR52B6Q8NGF0 335 aa3.38□□□□□ -1.87
VPS41-212ENST00000482217 OR1K1Q8NGR3 316 aa3.38□□□□□ -1.87
VPS41-212ENST00000482217 OR10A6Q8NH74 314 aa3.38□□□□□ -1.87
VPS41-212ENST00000482217 LNX1Q8TBB1 728 aaPredicted RBP3.38□□□□□ -1.87
VPS41-212ENST00000482217 FBXO25Q8TCJ0 367 aa3.38□□□□□ -1.87
VPS41-212ENST00000482217 DOK4Q8TEW6 326 aa3.38□□□□□ -1.87
VPS41-212ENST00000482217 ARPC1AQ92747 370 aa3.38□□□□□ -1.87
VPS41-212ENST00000482217 UCN3Q969E3 161 aa3.38□□□□□ -1.87
VPS41-212ENST00000482217 ZMYND19Q96E35 227 aaPredicted RBP3.38□□□□□ -1.87
VPS41-212ENST00000482217 ZHX1-C8orf76Q96EF9 292 aa3.38□□□□□ -1.87
VPS41-212ENST00000482217 IMP4Q96G21 291 aaKnown RBP3.38□□□□□ -1.87
VPS41-212ENST00000482217 MRAP2Q96G30 205 aa3.38□□□□□ -1.87
VPS41-212ENST00000482217 HSFY1Q96LI6 401 aa3.38□□□□□ -1.87
VPS41-212ENST00000482217 LINC00477Q96M19 166 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms