RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 SCGB1D1O95968 90 aa18.82■□□□□ 0.6
SDF4-206ENST00000478938 POLR2HP52434 150 aaKnown RBP18.82■□□□□ 0.6
SDF4-206ENST00000478938 SLC17A1Q14916 467 aa18.82■□□□□ 0.6
SDF4-206ENST00000478938 TMEM176BQ3YBM2 270 aaPredicted RBP18.82■□□□□ 0.6
SDF4-206ENST00000478938 DTWD2Q8NBA8 298 aa18.82■□□□□ 0.6
SDF4-206ENST00000478938 OR13G1Q8NGZ3 307 aa18.82■□□□□ 0.6
SDF4-206ENST00000478938 SDCBPO00560 298 aaPredicted RBP18.81■□□□□ 0.6
SDF4-206ENST00000478938 GABRA3P34903 492 aa18.81■□□□□ 0.6
SDF4-206ENST00000478938 TFPI2P48307 235 aa18.81■□□□□ 0.6
SDF4-206ENST00000478938 MMP16P51512 607 aa18.81■□□□□ 0.6
SDF4-206ENST00000478938 CTXN1P60606 82 aa18.81■□□□□ 0.6
SDF4-206ENST00000478938 ARHGAP19Q14CB8 494 aa18.81■□□□□ 0.6
SDF4-206ENST00000478938 SLC35E3Q7Z769 313 aa18.81■□□□□ 0.6
SDF4-206ENST00000478938 ZFP62Q8NB50 900 aaPredicted RBP18.81■□□□□ 0.6
SDF4-206ENST00000478938 FNDC9Q8TBE3 224 aa18.81■□□□□ 0.6
SDF4-206ENST00000478938 LMLNQ96KR4 655 aa18.81■□□□□ 0.6
SDF4-206ENST00000478938 ZNF558Q96NG5 402 aa18.81■□□□□ 0.6
SDF4-206ENST00000478938 NICN1Q9BSH3 213 aa18.81■□□□□ 0.6
SDF4-206ENST00000478938 ZNF700Q9H0M5 742 aa18.81■□□□□ 0.6
SDF4-206ENST00000478938 AHSA1O95433 338 aa18.81■□□□□ 0.6
SDF4-206ENST00000478938 GPR1P46091 355 aa18.81■□□□□ 0.6
SDF4-206ENST00000478938 HLA-DRB3P79483 266 aa18.81■□□□□ 0.6
SDF4-206ENST00000478938 FAM53BQ14153 422 aa18.81■□□□□ 0.6
SDF4-206ENST00000478938 EXOSC7Q15024 291 aaKnown RBP18.81■□□□□ 0.6
SDF4-206ENST00000478938 ULK3Q6PHR2 472 aa18.81■□□□□ 0.6
SDF4-206ENST00000478938 Q7L0L9 218 aa18.81■□□□□ 0.6
SDF4-206ENST00000478938 SHISA5Q8N114 240 aa18.81■□□□□ 0.6
SDF4-206ENST00000478938 C10orf53Q8N6V4 93 aa18.81■□□□□ 0.6
SDF4-206ENST00000478938 OR13C3Q8NGS6 347 aa18.81■□□□□ 0.6
SDF4-206ENST00000478938 C5orf34Q96MH7 638 aa18.81■□□□□ 0.6
SDF4-206ENST00000478938 GAB2Q9UQC2 676 aa18.81■□□□□ 0.6
SDF4-206ENST00000478938 RHBDD3Q9Y3P4 386 aa18.81■□□□□ 0.6
SDF4-206ENST00000478938 H7C4K7 107 aa18.8■□□□□ 0.6
SDF4-206ENST00000478938 KLF8O95600 359 aaPredicted RBP18.8■□□□□ 0.6
SDF4-206ENST00000478938 CD82P27701 267 aa18.8■□□□□ 0.6
SDF4-206ENST00000478938 PTGER4P35408 488 aa18.8■□□□□ 0.6
SDF4-206ENST00000478938 RPS4XP62701 263 aaKnown RBP18.8■□□□□ 0.6
SDF4-206ENST00000478938 C1orf100Q5SVJ3 147 aa18.8■□□□□ 0.6
SDF4-206ENST00000478938 SGPP2Q8IWX5 399 aa18.8■□□□□ 0.6
SDF4-206ENST00000478938 METTL27Q8N6F8 245 aaPredicted RBP18.8■□□□□ 0.6
SDF4-206ENST00000478938 DNASE2BQ8WZ79 361 aa18.8■□□□□ 0.6
SDF4-206ENST00000478938 MRPL24Q96A35 216 aaKnown RBP18.8■□□□□ 0.6
SDF4-206ENST00000478938 PTX4Q96A99 478 aa18.8■□□□□ 0.6
SDF4-206ENST00000478938 OR8B4Q96RC9 309 aa18.8■□□□□ 0.6
SDF4-206ENST00000478938 MRPL22Q9NWU5 206 aaKnown RBP18.8■□□□□ 0.6
SDF4-206ENST00000478938 LAMA3Q16787 3333 aa18.8■□□□□ 0.6
SDF4-206ENST00000478938 CEACAM18A8MTB9 384 aa18.8■□□□□ 0.6
SDF4-206ENST00000478938 FSTP19883 344 aa18.8■□□□□ 0.6
SDF4-206ENST00000478938 RND2P52198 227 aa18.8■□□□□ 0.6
SDF4-206ENST00000478938 HSF1Q00613 529 aa18.8■□□□□ 0.6
SDF4-206ENST00000478938 PRDX1Q06830 199 aaKnown RBP18.8■□□□□ 0.6
SDF4-206ENST00000478938 FOXF1Q12946 379 aa18.8■□□□□ 0.6
SDF4-206ENST00000478938 RTL10Q7L3V2 364 aa18.8■□□□□ 0.6
SDF4-206ENST00000478938 CABLES2Q9BTV7 478 aa18.8■□□□□ 0.6
SDF4-206ENST00000478938 CCL15-CCL14A0A0B4J2E2 113 aa18.79■□□□□ 0.6
SDF4-206ENST00000478938 CLDN34H7C241 214 aa18.79■□□□□ 0.6
SDF4-206ENST00000478938 NSA2O95478 260 aaKnown RBP18.79■□□□□ 0.6
SDF4-206ENST00000478938 TLE4Q04727 773 aa18.79■□□□□ 0.6
SDF4-206ENST00000478938 FZD2Q14332 565 aa18.79■□□□□ 0.6
SDF4-206ENST00000478938 CCL15Q16663 113 aa18.79■□□□□ 0.6
SDF4-206ENST00000478938 C1orf189Q5VU69 101 aa18.79■□□□□ 0.6
SDF4-206ENST00000478938 OR10A7Q8NGE5 316 aa18.79■□□□□ 0.6
SDF4-206ENST00000478938 OR2A1Q8NGT9 310 aa18.79■□□□□ 0.6
SDF4-206ENST00000478938 ALDH3B1P43353 468 aa18.79■□□□□ 0.6
SDF4-206ENST00000478938 FDX2Q6P4F2 183 aa18.79■□□□□ 0.6
SDF4-206ENST00000478938 SLC25A26Q70HW3 274 aa18.79■□□□□ 0.6
SDF4-206ENST00000478938 P4HA3Q7Z4N8 544 aa18.79■□□□□ 0.6
SDF4-206ENST00000478938 MARCH3Q86UD3 253 aa18.79■□□□□ 0.6
SDF4-206ENST00000478938 NOXO1Q8NFA2 376 aa18.79■□□□□ 0.6
SDF4-206ENST00000478938 OTOSQ8NHW6 89 aa18.79■□□□□ 0.6
SDF4-206ENST00000478938 SERINC2Q96SA4 455 aa18.79■□□□□ 0.6
SDF4-206ENST00000478938 VAX2Q9UIW0 290 aa18.79■□□□□ 0.6
SDF4-206ENST00000478938 LSM7Q9UK45 103 aaKnown RBP18.79■□□□□ 0.6
SDF4-206ENST00000478938 K7EQS6 105 aa18.78■□□□□ 0.6
SDF4-206ENST00000478938 HLA-DQA2P01906 255 aa18.78■□□□□ 0.6
SDF4-206ENST00000478938 IL6RP08887 468 aaPredicted RBP18.78■□□□□ 0.6
SDF4-206ENST00000478938 PPM1AP35813 382 aa18.78■□□□□ 0.6
SDF4-206ENST00000478938 RBMXP38159 391 aaKnown RBP18.78■□□□□ 0.6
SDF4-206ENST00000478938 METAP1P53582 386 aa18.78■□□□□ 0.6
SDF4-206ENST00000478938 SP3Q02447 781 aa18.78■□□□□ 0.6
SDF4-206ENST00000478938 VAX1Q5SQQ9 334 aa18.78■□□□□ 0.6
SDF4-206ENST00000478938 KREMEN2Q8NCW0 462 aa18.78■□□□□ 0.6
SDF4-206ENST00000478938 TUBD1Q9UJT1 453 aa18.78■□□□□ 0.6
SDF4-206ENST00000478938 TCFL5Q9UL49 500 aa18.78■□□□□ 0.6
SDF4-206ENST00000478938 TMEM14AQ9Y6G1 99 aa18.78■□□□□ 0.6
SDF4-206ENST00000478938 PDE4DIPQ5VU43 2346 aa18.78■□□□□ 0.6
SDF4-206ENST00000478938 CNOT4O95628 575 aaKnown RBP18.78■□□□□ 0.6
SDF4-206ENST00000478938 DIRAS3O95661 229 aa18.78■□□□□ 0.6
SDF4-206ENST00000478938 GUSBP08236 651 aa18.78■□□□□ 0.6
SDF4-206ENST00000478938 VSIG8P0DPA2 414 aa18.78■□□□□ 0.6
SDF4-206ENST00000478938 SLC37A1P57057 533 aa18.78■□□□□ 0.6
SDF4-206ENST00000478938 WDR25Q64LD2 544 aaPredicted RBP18.78■□□□□ 0.6
SDF4-206ENST00000478938 SLC24A5Q71RS6 500 aa18.78■□□□□ 0.6
SDF4-206ENST00000478938 SLC16A14Q7RTX9 510 aa18.78■□□□□ 0.6
SDF4-206ENST00000478938 OR1N1Q8NGS0 311 aa18.78■□□□□ 0.6
SDF4-206ENST00000478938 CYB5D2Q8WUJ1 264 aa18.78■□□□□ 0.6
SDF4-206ENST00000478938 LINC00615Q96LM1 132 aaPredicted RBP18.78■□□□□ 0.6
SDF4-206ENST00000478938 GAL3ST2Q9H3Q3 398 aa18.78■□□□□ 0.6
SDF4-206ENST00000478938 TRBV24-1A0A075B6N3 115 aa18.77■□□□□ 0.6
SDF4-206ENST00000478938 EOMESO95936 686 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms