RNA–Protein interactions for RNA: ENST00000478840.1

UPF3B-203, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3B, Length 748 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-203ENST00000478840 KRTAP10-5P60370 271 aa3.26□□□□□ -1.89
UPF3B-203ENST00000478840 STX3Q13277 289 aa3.26□□□□□ -1.89
UPF3B-203ENST00000478840 NAB1Q13506 487 aa3.26□□□□□ -1.89
UPF3B-203ENST00000478840 SMUG1Q53HV7 270 aa3.26□□□□□ -1.89
UPF3B-203ENST00000478840 MPV17L2Q567V2 206 aa3.26□□□□□ -1.89
UPF3B-203ENST00000478840 FAM19A1Q7Z5A9 133 aa3.26□□□□□ -1.89
UPF3B-203ENST00000478840 SETD3Q86TU7 594 aaPredicted RBP3.26□□□□□ -1.89
UPF3B-203ENST00000478840 WDFY1Q8IWB7 410 aa3.26□□□□□ -1.89
UPF3B-203ENST00000478840 SAXO1Q8IYX7 474 aa3.26□□□□□ -1.89
UPF3B-203ENST00000478840 C17orf78Q8N4C9 275 aa3.26□□□□□ -1.89
UPF3B-203ENST00000478840 OR52P1PQ8NH57 321 aa3.26□□□□□ -1.89
UPF3B-203ENST00000478840 ZNF488Q96MN9 340 aa3.26□□□□□ -1.89
UPF3B-203ENST00000478840 CIB1Q99828 191 aa3.26□□□□□ -1.89
UPF3B-203ENST00000478840 C20orf144Q9BQM9 153 aa3.26□□□□□ -1.89
UPF3B-203ENST00000478840 GGTLC1Q9BX51 225 aa3.26□□□□□ -1.89
UPF3B-203ENST00000478840 PRORYQ9H606 182 aa3.26□□□□□ -1.89
UPF3B-203ENST00000478840 SDHAF2Q9NX18 166 aa3.26□□□□□ -1.89
UPF3B-203ENST00000478840 MRM2Q9UI43 246 aaKnown RBP3.26□□□□□ -1.89
UPF3B-203ENST00000478840 ZNF222Q9UK12 451 aa3.26□□□□□ -1.89
UPF3B-203ENST00000478840 NXT1Q9UKK6 140 aaKnown RBP3.26□□□□□ -1.89
UPF3B-203ENST00000478840 SIGLEC1Q9BZZ2 1709 aa3.26□□□□□ -1.89
UPF3B-203ENST00000478840 IGKV6D-21A0A0A0MT36 114 aa3.25□□□□□ -1.89
UPF3B-203ENST00000478840 IGHV3-72A0A0B4J1Y9 119 aa3.25□□□□□ -1.89
UPF3B-203ENST00000478840 TMEM223A0PJW6 202 aa3.25□□□□□ -1.89
UPF3B-203ENST00000478840 ZNF705GA8MUZ8 300 aaPredicted RBP3.25□□□□□ -1.89
UPF3B-203ENST00000478840 F8VP50 259 aa3.25□□□□□ -1.89
UPF3B-203ENST00000478840 RNASEK-C17orf49H0YIS7 233 aa3.25□□□□□ -1.89
UPF3B-203ENST00000478840 H0YJW9 148 aa3.25□□□□□ -1.89
UPF3B-203ENST00000478840 MYL12BO14950 172 aa3.25□□□□□ -1.89
UPF3B-203ENST00000478840 CD8AP01732 235 aa3.25□□□□□ -1.89
UPF3B-203ENST00000478840 IGHV3-11P01762 117 aa3.25□□□□□ -1.89
UPF3B-203ENST00000478840 MMP7P09237 267 aaPredicted RBP3.25□□□□□ -1.89
UPF3B-203ENST00000478840 LIPCP11150 499 aa3.25□□□□□ -1.89
UPF3B-203ENST00000478840 IL12BP29460 328 aa3.25□□□□□ -1.89
UPF3B-203ENST00000478840 MTPNP58546 118 aa3.25□□□□□ -1.89
UPF3B-203ENST00000478840 VSNL1P62760 191 aa3.25□□□□□ -1.89
UPF3B-203ENST00000478840 CYP24A1Q07973 514 aa3.25□□□□□ -1.89
UPF3B-203ENST00000478840 C16orf72Q14CZ0 275 aa3.25□□□□□ -1.89
UPF3B-203ENST00000478840 C6orf99Q4VX62 202 aa3.25□□□□□ -1.89
UPF3B-203ENST00000478840 MFSD14CQ5VZR4 134 aa3.25□□□□□ -1.89
UPF3B-203ENST00000478840 Q5W150 140 aa3.25□□□□□ -1.89
UPF3B-203ENST00000478840 RIMKLAQ8IXN7 391 aa3.25□□□□□ -1.89
UPF3B-203ENST00000478840 LGI3Q8N145 548 aa3.25□□□□□ -1.89
UPF3B-203ENST00000478840 CDRT4Q8N9R6 151 aa3.25□□□□□ -1.89
UPF3B-203ENST00000478840 OR4K5Q8NGD3 323 aa3.25□□□□□ -1.89
UPF3B-203ENST00000478840 OR1J4Q8NGS1 313 aa3.25□□□□□ -1.89
UPF3B-203ENST00000478840 OR2Y1Q8NGV0 311 aa3.25□□□□□ -1.89
UPF3B-203ENST00000478840 OR1S1Q8NH92 325 aa3.25□□□□□ -1.89
UPF3B-203ENST00000478840 ANGPTL6Q8NI99 470 aa3.25□□□□□ -1.89
UPF3B-203ENST00000478840 ENKURQ8TC29 256 aa3.25□□□□□ -1.89
UPF3B-203ENST00000478840 C18orf15Q96N68 181 aa3.25□□□□□ -1.89
UPF3B-203ENST00000478840 OR4K3Q96R72 315 aa3.25□□□□□ -1.89
UPF3B-203ENST00000478840 ZNF382Q96SR6 550 aa3.25□□□□□ -1.89
UPF3B-203ENST00000478840 RBBP8Q99708 897 aa3.25□□□□□ -1.89
UPF3B-203ENST00000478840 TIMM29Q9BSF4 260 aa3.25□□□□□ -1.89
UPF3B-203ENST00000478840 FGF23Q9GZV9 251 aaPredicted RBP3.25□□□□□ -1.89
UPF3B-203ENST00000478840 COA1Q9GZY4 146 aa3.25□□□□□ -1.89
UPF3B-203ENST00000478840 C1orf198Q9H425 327 aa3.25□□□□□ -1.89
UPF3B-203ENST00000478840 WDR55Q9H6Y2 383 aaPredicted RBP3.25□□□□□ -1.89
UPF3B-203ENST00000478840 SPACA1Q9HBV2 294 aa3.25□□□□□ -1.89
UPF3B-203ENST00000478840 ZNF355PQ9NSJ1 428 aa3.25□□□□□ -1.89
UPF3B-203ENST00000478840 NDRG2Q9UN36 371 aaKnown RBP3.25□□□□□ -1.89
UPF3B-203ENST00000478840 WIF1Q9Y5W5 379 aa3.25□□□□□ -1.89
UPF3B-203ENST00000478840 AHDC1Q5TGY3 1603 aaPredicted RBP3.24□□□□□ -1.89
UPF3B-203ENST00000478840 FAM240AA0A1B0GVK7 77 aa3.24□□□□□ -1.89
UPF3B-203ENST00000478840 ERICH2A1L162 156 aa3.24□□□□□ -1.89
UPF3B-203ENST00000478840 MANBAO00462 879 aa3.24□□□□□ -1.89
UPF3B-203ENST00000478840 SERPINB7O75635 380 aa3.24□□□□□ -1.89
UPF3B-203ENST00000478840 MAGP20916 626 aa3.24□□□□□ -1.89
UPF3B-203ENST00000478840 PAX6P26367 422 aa3.24□□□□□ -1.89
UPF3B-203ENST00000478840 KRT71Q3SY84 523 aa3.24□□□□□ -1.89
UPF3B-203ENST00000478840 CDNFQ49AH0 187 aa3.24□□□□□ -1.89
UPF3B-203ENST00000478840 Q6P435 159 aa3.24□□□□□ -1.89
UPF3B-203ENST00000478840 OPN5Q6U736 354 aa3.24□□□□□ -1.89
UPF3B-203ENST00000478840 Q6ZR03 302 aa3.24□□□□□ -1.89
UPF3B-203ENST00000478840 LRRC8AQ8IWT6 810 aa3.24□□□□□ -1.89
UPF3B-203ENST00000478840 DRAM1Q8N682 238 aa3.24□□□□□ -1.89
UPF3B-203ENST00000478840 Q8N9L7 120 aa3.24□□□□□ -1.89
UPF3B-203ENST00000478840 OR4M1Q8NGD0 313 aa3.24□□□□□ -1.89
UPF3B-203ENST00000478840 DOK4Q8TEW6 326 aa3.24□□□□□ -1.89
UPF3B-203ENST00000478840 DCAKDQ8WVC6 231 aa3.24□□□□□ -1.89
UPF3B-203ENST00000478840 ADTRPQ96IZ2 230 aa3.24□□□□□ -1.89
UPF3B-203ENST00000478840 PDCD1LG2Q9BQ51 273 aa3.24□□□□□ -1.89
UPF3B-203ENST00000478840 NDFIP1Q9BT67 221 aa3.24□□□□□ -1.89
UPF3B-203ENST00000478840 RSG1Q9BU20 258 aa3.24□□□□□ -1.89
UPF3B-203ENST00000478840 PLEKHF2Q9H8W4 249 aa3.24□□□□□ -1.89
UPF3B-203ENST00000478840 PLEKHA1Q9HB21 404 aa3.24□□□□□ -1.89
UPF3B-203ENST00000478840 SLC38A10Q9HBR0 1119 aa3.24□□□□□ -1.89
UPF3B-203ENST00000478840 ACOT13Q9NPJ3 140 aa3.24□□□□□ -1.89
UPF3B-203ENST00000478840 C8orf17Q9NRJ1 99 aa3.24□□□□□ -1.89
UPF3B-203ENST00000478840 RHBDL2Q9NX52 303 aa3.24□□□□□ -1.89
UPF3B-203ENST00000478840 MAT2BQ9NZL9 334 aa3.24□□□□□ -1.89
UPF3B-203ENST00000478840 RAB26Q9ULW5 256 aa3.24□□□□□ -1.89
UPF3B-203ENST00000478840 IGHV7-4-1A0A0J9YVY3 117 aa3.23□□□□□ -1.89
UPF3B-203ENST00000478840 SLC5A10A0PJK1 596 aa3.23□□□□□ -1.89
UPF3B-203ENST00000478840 NDUFC2-KCTD14E9PQ53 114 aa3.23□□□□□ -1.89
UPF3B-203ENST00000478840 J3QT63 122 aa3.23□□□□□ -1.89
UPF3B-203ENST00000478840 hCG_2039718K7EN88 272 aa3.23□□□□□ -1.89
UPF3B-203ENST00000478840 PLPP3O14495 311 aa3.23□□□□□ -1.89
UPF3B-203ENST00000478840 CHST10O43529 356 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms