RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 TRADDQ15628 312 aa3.42□□□□□ -1.86
VPS50-214ENST00000477935 TSNQ15631 228 aaKnown RBP3.42□□□□□ -1.86
VPS50-214ENST00000477935 LTB4RQ15722 352 aa3.42□□□□□ -1.86
VPS50-214ENST00000477935 ECSCRQ19T08 205 aa3.42□□□□□ -1.86
VPS50-214ENST00000477935 NSUN5P1Q3KNT7 163 aa3.42□□□□□ -1.86
VPS50-214ENST00000477935 MUC21Q5SSG8 566 aa3.42□□□□□ -1.86
VPS50-214ENST00000477935 EMBQ6PCB8 327 aa3.42□□□□□ -1.86
VPS50-214ENST00000477935 C6orf89Q6UWU4 347 aa3.42□□□□□ -1.86
VPS50-214ENST00000477935 UNQ9370/PRO34162Q6UXP9 181 aa3.42□□□□□ -1.86
VPS50-214ENST00000477935 MSANTD1Q6ZTZ1 278 aa3.42□□□□□ -1.86
VPS50-214ENST00000477935 RFPL4BQ6ZWI9 263 aa3.42□□□□□ -1.86
VPS50-214ENST00000477935 LRRC28Q86X40 367 aaPredicted RBP3.42□□□□□ -1.86
VPS50-214ENST00000477935 C11orf53Q8IXP5 236 aa3.42□□□□□ -1.86
VPS50-214ENST00000477935 ZBED8Q8IZ13 594 aa3.42□□□□□ -1.86
VPS50-214ENST00000477935 UBL4BQ8N7F7 174 aa3.42□□□□□ -1.86
VPS50-214ENST00000477935 OR13C5Q8NGS8 318 aa3.42□□□□□ -1.86
VPS50-214ENST00000477935 OR9A2Q8NGT5 310 aa3.42□□□□□ -1.86
VPS50-214ENST00000477935 MGARPQ8TDB4 240 aa3.42□□□□□ -1.86
VPS50-214ENST00000477935 GPR119Q8TDV5 335 aa3.42□□□□□ -1.86
VPS50-214ENST00000477935 LIPHQ8WWY8 451 aa3.42□□□□□ -1.86
VPS50-214ENST00000477935 TMEM234Q8WY98 164 aa3.42□□□□□ -1.86
VPS50-214ENST00000477935 TM4SF18Q96CE8 201 aa3.42□□□□□ -1.86
VPS50-214ENST00000477935 BPIFA2Q96DR5 249 aa3.42□□□□□ -1.86
VPS50-214ENST00000477935 NEURL3Q96EH8 262 aa3.42□□□□□ -1.86
VPS50-214ENST00000477935 SH3YL1Q96HL8 342 aaPredicted RBP3.42□□□□□ -1.86
VPS50-214ENST00000477935 CHID1Q9BWS9 393 aa3.42□□□□□ -1.86
VPS50-214ENST00000477935 DERL2Q9GZP9 239 aa3.42□□□□□ -1.86
VPS50-214ENST00000477935 NMUR2Q9GZQ4 415 aa3.42□□□□□ -1.86
VPS50-214ENST00000477935 NHEJ1Q9H9Q4 299 aaPredicted RBP3.42□□□□□ -1.86
VPS50-214ENST00000477935 PLEKHA3Q9HB20 300 aa3.42□□□□□ -1.86
VPS50-214ENST00000477935 NMRK1Q9NWW6 199 aa3.42□□□□□ -1.86
VPS50-214ENST00000477935 TAAR3PQ9P1P4 343 aa3.42□□□□□ -1.86
VPS50-214ENST00000477935 SLC17A7Q9P2U7 560 aa3.42□□□□□ -1.86
VPS50-214ENST00000477935 FBXL3Q9UKT7 428 aa3.42□□□□□ -1.86
VPS50-214ENST00000477935 ACOT9Q9Y305 439 aa3.42□□□□□ -1.86
VPS50-214ENST00000477935 CAB39Q9Y376 341 aaPredicted RBP3.42□□□□□ -1.86
VPS50-214ENST00000477935 HDGFL3Q9Y3E1 203 aa3.42□□□□□ -1.86
VPS50-214ENST00000477935 FLVCR1Q9Y5Y0 555 aa3.42□□□□□ -1.86
VPS50-214ENST00000477935 NPTNQ9Y639 398 aa3.42□□□□□ -1.86
VPS50-214ENST00000477935 IGLV3-9A0A075B6K5 115 aa3.41□□□□□ -1.86
VPS50-214ENST00000477935 IGHV2-70DA0A0C4DH43 119 aa3.41□□□□□ -1.86
VPS50-214ENST00000477935 A0A0U1RQK1 487 aa3.41□□□□□ -1.86
VPS50-214ENST00000477935 ZNF320A2RRD8 509 aa3.41□□□□□ -1.86
VPS50-214ENST00000477935 OOEPA6NGQ2 149 aa3.41□□□□□ -1.86
VPS50-214ENST00000477935 MIF4GDA9UHW6 222 aaKnown RBP3.41□□□□□ -1.86
VPS50-214ENST00000477935 RPL36A-HNRNPH2H7BZ11 118 aa3.41□□□□□ -1.86
VPS50-214ENST00000477935 FBP2O00757 339 aa3.41□□□□□ -1.86
VPS50-214ENST00000477935 CLIC3O95833 236 aa3.41□□□□□ -1.86
VPS50-214ENST00000477935 IGHG1P01857 330 aa3.41□□□□□ -1.86
VPS50-214ENST00000477935 MT-ND1P03886 318 aa3.41□□□□□ -1.86
VPS50-214ENST00000477935 THY1P04216 161 aa3.41□□□□□ -1.86
VPS50-214ENST00000477935 IFI6P09912 130 aa3.41□□□□□ -1.86
VPS50-214ENST00000477935 SBK2P0C263 348 aa3.41□□□□□ -1.86
VPS50-214ENST00000477935 ETS1P14921 441 aa3.41□□□□□ -1.86
VPS50-214ENST00000477935 KRTAP5-9P26371 169 aa3.41□□□□□ -1.86
VPS50-214ENST00000477935 SOAT1P35610 550 aa3.41□□□□□ -1.86
VPS50-214ENST00000477935 ATP6V0D1P61421 351 aa3.41□□□□□ -1.86
VPS50-214ENST00000477935 SLC35A1P78382 337 aa3.41□□□□□ -1.86
VPS50-214ENST00000477935 RBBP4Q09028 425 aa3.41□□□□□ -1.86
VPS50-214ENST00000477935 GPR50Q13585 617 aa3.41□□□□□ -1.86
VPS50-214ENST00000477935 CEACAM7Q14002 265 aa3.41□□□□□ -1.86
VPS50-214ENST00000477935 SLC17A1Q14916 467 aa3.41□□□□□ -1.86
VPS50-214ENST00000477935 MAD2L1BPQ15013 274 aaPredicted RBP3.41□□□□□ -1.86
VPS50-214ENST00000477935 STX1AQ16623 288 aa3.41□□□□□ -1.86
VPS50-214ENST00000477935 RFTN2Q52LD8 501 aaPredicted RBP3.41□□□□□ -1.86
VPS50-214ENST00000477935 PRAMEF8Q5VWM4 474 aa3.41□□□□□ -1.86
VPS50-214ENST00000477935 PRAMEF7Q5VXH5 474 aa3.41□□□□□ -1.86
VPS50-214ENST00000477935 RNLSQ5VYX0 342 aa3.41□□□□□ -1.86
VPS50-214ENST00000477935 ZFAND6Q6FIF0 208 aa3.41□□□□□ -1.86
VPS50-214ENST00000477935 ADAMTSL5Q6ZMM2 481 aa3.41□□□□□ -1.86
VPS50-214ENST00000477935 AAED1Q7RTV5 226 aa3.41□□□□□ -1.86
VPS50-214ENST00000477935 ADCK1Q86TW2 530 aa3.41□□□□□ -1.86
VPS50-214ENST00000477935 LRP11Q86VZ4 500 aa3.41□□□□□ -1.86
VPS50-214ENST00000477935 FAM9CQ8IZT9 166 aa3.41□□□□□ -1.86
VPS50-214ENST00000477935 RNF175Q8N4F7 328 aa3.41□□□□□ -1.86
VPS50-214ENST00000477935 OR5W2Q8NH69 310 aa3.41□□□□□ -1.86
VPS50-214ENST00000477935 GPR151Q8TDV0 419 aa3.41□□□□□ -1.86
VPS50-214ENST00000477935 C11orf40Q8WZ69 217 aa3.41□□□□□ -1.86
VPS50-214ENST00000477935 ST8SIA1Q92185 356 aa3.41□□□□□ -1.86
VPS50-214ENST00000477935 ESAMQ96AP7 390 aa3.41□□□□□ -1.86
VPS50-214ENST00000477935 AURKBQ96GD4 344 aaPredicted RBP3.41□□□□□ -1.86
VPS50-214ENST00000477935 PLEKHA8Q96JA3 519 aa3.41□□□□□ -1.86
VPS50-214ENST00000477935 RCHY1Q96PM5 261 aa3.41□□□□□ -1.86
VPS50-214ENST00000477935 IQCGQ9H095 443 aaKnown RBP3.41□□□□□ -1.86
VPS50-214ENST00000477935 RANBP3Q9H6Z4 567 aaPredicted RBP3.41□□□□□ -1.86
VPS50-214ENST00000477935 ANKRA2Q9H9E1 313 aa3.41□□□□□ -1.86
VPS50-214ENST00000477935 POPDC3Q9HBV1 291 aa3.41□□□□□ -1.86
VPS50-214ENST00000477935 CD274Q9NZQ7 290 aa3.41□□□□□ -1.86
VPS50-214ENST00000477935 THYN1Q9P016 225 aa3.41□□□□□ -1.86
VPS50-214ENST00000477935 OPTCQ9UBM4 332 aa3.41□□□□□ -1.86
VPS50-214ENST00000477935 TBK1Q9UHD2 729 aa3.41□□□□□ -1.86
VPS50-214ENST00000477935 VPREB3Q9UKI3 123 aa3.41□□□□□ -1.86
VPS50-214ENST00000477935 SH3GLB1Q9Y371 365 aa3.41□□□□□ -1.86
VPS50-214ENST00000477935 UPK1AO00322 258 aa3.4□□□□□ -1.87
VPS50-214ENST00000477935 EIF4E2O60573 245 aaKnown RBP3.4□□□□□ -1.87
VPS50-214ENST00000477935 VAMP5O95183 116 aa3.4□□□□□ -1.87
VPS50-214ENST00000477935 PSMG1O95456 288 aa3.4□□□□□ -1.87
VPS50-214ENST00000477935 H6PDO95479 791 aa3.4□□□□□ -1.87
VPS50-214ENST00000477935 LGI1O95970 557 aa3.4□□□□□ -1.87
VPS50-214ENST00000477935 GYPCP04921 128 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms