RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 MIDNQ504T8 468 aa11.28□□□□□ -0.6
RTFDC1-207ENST00000477573 AADACL3Q5VUY0 350 aa11.28□□□□□ -0.6
RTFDC1-207ENST00000477573 TCF24Q7RTU0 167 aa11.28□□□□□ -0.6
RTFDC1-207ENST00000477573 RD3Q7Z3Z2 195 aa11.28□□□□□ -0.6
RTFDC1-207ENST00000477573 LYG2Q86SG7 212 aa11.28□□□□□ -0.6
RTFDC1-207ENST00000477573 OR9K2Q8NGE7 335 aa11.28□□□□□ -0.6
RTFDC1-207ENST00000477573 OR5L1Q8NGL2 311 aa11.28□□□□□ -0.6
RTFDC1-207ENST00000477573 SLC5A7Q9GZV3 580 aa11.28□□□□□ -0.6
RTFDC1-207ENST00000477573 RBKSQ9H477 322 aa11.28□□□□□ -0.6
RTFDC1-207ENST00000477573 UBE2ZQ9H832 354 aaPredicted RBP11.28□□□□□ -0.6
RTFDC1-207ENST00000477573 GPR35Q9HC97 309 aa11.28□□□□□ -0.6
RTFDC1-207ENST00000477573 AK6Q9Y3D8 172 aaKnown RBP11.28□□□□□ -0.6
RTFDC1-207ENST00000477573 MRPS18BQ9Y676 258 aaKnown RBP11.28□□□□□ -0.6
RTFDC1-207ENST00000477573 HEATR5BQ9P2D3 2071 aa11.28□□□□□ -0.6
RTFDC1-207ENST00000477573 A0A1B0GV72 72 aa11.27□□□□□ -0.6
RTFDC1-207ENST00000477573 M0QZ24 198 aa11.27□□□□□ -0.6
RTFDC1-207ENST00000477573 YY2O15391 372 aa11.27□□□□□ -0.6
RTFDC1-207ENST00000477573 P2RX6O15547 441 aa11.27□□□□□ -0.6
RTFDC1-207ENST00000477573 NDUFS4O43181 175 aa11.27□□□□□ -0.6
RTFDC1-207ENST00000477573 RAMP1O60894 148 aa11.27□□□□□ -0.6
RTFDC1-207ENST00000477573 CTSVO60911 334 aa11.27□□□□□ -0.6
RTFDC1-207ENST00000477573 HLA-AP01891 365 aaKnown RBP11.27□□□□□ -0.6
RTFDC1-207ENST00000477573 CD1AP06126 327 aa11.27□□□□□ -0.6
RTFDC1-207ENST00000477573 CD37P11049 281 aa11.27□□□□□ -0.6
RTFDC1-207ENST00000477573 SCGB1A1P11684 91 aa11.27□□□□□ -0.6
RTFDC1-207ENST00000477573 GZMHP20718 246 aa11.27□□□□□ -0.6
RTFDC1-207ENST00000477573 GLRA1P23415 457 aa11.27□□□□□ -0.6
RTFDC1-207ENST00000477573 CXCR1P25024 350 aa11.27□□□□□ -0.6
RTFDC1-207ENST00000477573 FBLN7Q53RD9 439 aa11.27□□□□□ -0.6
RTFDC1-207ENST00000477573 IER5LQ5T953 404 aa11.27□□□□□ -0.6
RTFDC1-207ENST00000477573 SIRT6Q8N6T7 355 aa11.27□□□□□ -0.6
RTFDC1-207ENST00000477573 TSACCQ96A04 125 aaPredicted RBP11.27□□□□□ -0.6
RTFDC1-207ENST00000477573 DERL3Q96Q80 235 aa11.27□□□□□ -0.6
RTFDC1-207ENST00000477573 RNF126Q9BV68 326 aa11.27□□□□□ -0.6
RTFDC1-207ENST00000477573 LYRM2Q9NU23 88 aaPredicted RBP11.27□□□□□ -0.6
RTFDC1-207ENST00000477573 TBC1D29Q9UFV1 150 aa11.27□□□□□ -0.6
RTFDC1-207ENST00000477573 SRPK3Q9UPE1 567 aa11.27□□□□□ -0.6
RTFDC1-207ENST00000477573 ST3GAL6Q9Y274 331 aa11.27□□□□□ -0.6
RTFDC1-207ENST00000477573 NTNG1Q9Y2I2 539 aa11.27□□□□□ -0.6
RTFDC1-207ENST00000477573 MEMO1Q9Y316 297 aa11.27□□□□□ -0.6
RTFDC1-207ENST00000477573 COX11Q9Y6N1 276 aa11.27□□□□□ -0.6
RTFDC1-207ENST00000477573 DAPL1A0PJW8 107 aa11.27□□□□□ -0.61
RTFDC1-207ENST00000477573 PRAMEF27A3QJZ7 478 aa11.27□□□□□ -0.61
RTFDC1-207ENST00000477573 H0Y8X5 98 aa11.27□□□□□ -0.61
RTFDC1-207ENST00000477573 H3BQ15 152 aa11.27□□□□□ -0.61
RTFDC1-207ENST00000477573 TBX19O60806 448 aa11.27□□□□□ -0.61
RTFDC1-207ENST00000477573 CTAG2O75638 210 aa11.27□□□□□ -0.61
RTFDC1-207ENST00000477573 IGLV3-19P01714 112 aa11.27□□□□□ -0.61
RTFDC1-207ENST00000477573 BMP5P22003 454 aa11.27□□□□□ -0.61
RTFDC1-207ENST00000477573 MC5RP33032 325 aa11.27□□□□□ -0.61
RTFDC1-207ENST00000477573 BSGP35613 385 aa11.27□□□□□ -0.61
RTFDC1-207ENST00000477573 ACAA2P42765 397 aaKnown RBP11.27□□□□□ -0.61
RTFDC1-207ENST00000477573 TRA2BP62995 288 aaKnown RBP11.27□□□□□ -0.61
RTFDC1-207ENST00000477573 ZNF385BQ569K4 471 aa11.27□□□□□ -0.61
RTFDC1-207ENST00000477573 COX20Q5RI15 118 aa11.27□□□□□ -0.61
RTFDC1-207ENST00000477573 STEAP1BQ6NZ63 245 aa11.27□□□□□ -0.61
RTFDC1-207ENST00000477573 PRSS54Q6PEW0 395 aa11.27□□□□□ -0.61
RTFDC1-207ENST00000477573 ZNF101Q8IZC7 436 aa11.27□□□□□ -0.61
RTFDC1-207ENST00000477573 D2HGDHQ8N465 521 aa11.27□□□□□ -0.61
RTFDC1-207ENST00000477573 NRTNQ99748 197 aa11.27□□□□□ -0.61
RTFDC1-207ENST00000477573 PLA2G12AQ9BZM1 189 aa11.27□□□□□ -0.61
RTFDC1-207ENST00000477573 OR51I1Q9H343 314 aa11.27□□□□□ -0.61
RTFDC1-207ENST00000477573 PRO3102Q9H379 93 aa11.27□□□□□ -0.61
RTFDC1-207ENST00000477573 OR2S2Q9NQN1 319 aa11.27□□□□□ -0.61
RTFDC1-207ENST00000477573 ZNF701Q9NV72 531 aaPredicted RBP11.27□□□□□ -0.61
RTFDC1-207ENST00000477573 OR5AC2Q9NZP5 309 aa11.27□□□□□ -0.61
RTFDC1-207ENST00000477573 ZNF727A8MUV8 499 aa11.26□□□□□ -0.61
RTFDC1-207ENST00000477573 PRICKLE3O43900 615 aaPredicted RBP11.26□□□□□ -0.61
RTFDC1-207ENST00000477573 DUS4LO95620 317 aaKnown RBP11.26□□□□□ -0.61
RTFDC1-207ENST00000477573 OR5G3P0C626 314 aa11.26□□□□□ -0.61
RTFDC1-207ENST00000477573 SRMP19623 302 aa11.26□□□□□ -0.61
RTFDC1-207ENST00000477573 ZBTB25P24278 435 aa11.26□□□□□ -0.61
RTFDC1-207ENST00000477573 GNRHRP30968 328 aa11.26□□□□□ -0.61
RTFDC1-207ENST00000477573 HBA1P69905 142 aa11.26□□□□□ -0.61
RTFDC1-207ENST00000477573 PSG3Q16557 428 aa11.26□□□□□ -0.61
RTFDC1-207ENST00000477573 SLC26A10Q8NG04 563 aa11.26□□□□□ -0.61
RTFDC1-207ENST00000477573 OR4D5Q8NGN0 318 aa11.26□□□□□ -0.61
RTFDC1-207ENST00000477573 SLC25A43Q8WUT9 341 aaPredicted RBP11.26□□□□□ -0.61
RTFDC1-207ENST00000477573 MCHR2Q969V1 340 aa11.26□□□□□ -0.61
RTFDC1-207ENST00000477573 MS4A6EQ96DS6 147 aa11.26□□□□□ -0.61
RTFDC1-207ENST00000477573 SEH1LQ96EE3 360 aa11.26□□□□□ -0.61
RTFDC1-207ENST00000477573 SLC5A6Q9Y289 635 aa11.26□□□□□ -0.61
RTFDC1-207ENST00000477573 IGHV2OR16-5A0A0B4J2B6 119 aa11.26□□□□□ -0.61
RTFDC1-207ENST00000477573 ANKUB1A6NFN9 424 aa11.26□□□□□ -0.61
RTFDC1-207ENST00000477573 SLC22A31A6NKX4 558 aa11.26□□□□□ -0.61
RTFDC1-207ENST00000477573 RNF212BA8MTL3 300 aa11.26□□□□□ -0.61
RTFDC1-207ENST00000477573 SLC25A17O43808 307 aa11.26□□□□□ -0.61
RTFDC1-207ENST00000477573 JTBO76095 146 aa11.26□□□□□ -0.61
RTFDC1-207ENST00000477573 SYNGR4O95473 234 aa11.26□□□□□ -0.61
RTFDC1-207ENST00000477573 TNFP01375 233 aa11.26□□□□□ -0.61
RTFDC1-207ENST00000477573 F3P13726 295 aa11.26□□□□□ -0.61
RTFDC1-207ENST00000477573 LMO1P25800 156 aa11.26□□□□□ -0.61
RTFDC1-207ENST00000477573 AK4P27144 223 aaPredicted RBP11.26□□□□□ -0.61
RTFDC1-207ENST00000477573 HIST1H3AP68431 136 aa11.26□□□□□ -0.61
RTFDC1-207ENST00000477573 GPR18Q14330 331 aa11.26□□□□□ -0.61
RTFDC1-207ENST00000477573 TMEM183BQ1AE95 376 aa11.26□□□□□ -0.61
RTFDC1-207ENST00000477573 KIAA0895LQ68EN5 471 aa11.26□□□□□ -0.61
RTFDC1-207ENST00000477573 OR4C11Q6IEV9 310 aa11.26□□□□□ -0.61
RTFDC1-207ENST00000477573 REEP3Q6NUK4 255 aa11.26□□□□□ -0.61
RTFDC1-207ENST00000477573 Q6ZSR6 202 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms