RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 FN3KRPQ9HA64 309 aa12.68□□□□□ -0.38
VARS-223ENST00000474643 PLCXD1Q9NUJ7 323 aa12.68□□□□□ -0.38
VARS-223ENST00000474643 UFSP2Q9NUQ7 469 aa12.68□□□□□ -0.38
VARS-223ENST00000474643 MRPS18AQ9NVS2 196 aaKnown RBP12.68□□□□□ -0.38
VARS-223ENST00000474643 CLN8Q9UBY8 286 aa12.68□□□□□ -0.38
VARS-223ENST00000474643 INSIG2Q9Y5U4 225 aa12.68□□□□□ -0.38
VARS-223ENST00000474643 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.67□□□□□ -0.38
VARS-223ENST00000474643 TRAPPC2LH3BP13 241 aa12.67□□□□□ -0.38
VARS-223ENST00000474643 GNAO1P09471 354 aa12.67□□□□□ -0.38
VARS-223ENST00000474643 OR2T7P0C7T2 308 aa12.67□□□□□ -0.38
VARS-223ENST00000474643 ANOS1P23352 680 aa12.67□□□□□ -0.38
VARS-223ENST00000474643 CPT2P23786 658 aa12.67□□□□□ -0.38
VARS-223ENST00000474643 GNALP38405 381 aa12.67□□□□□ -0.38
VARS-223ENST00000474643 DDOSTP39656 456 aa12.67□□□□□ -0.38
VARS-223ENST00000474643 PITPNBP48739 271 aa12.67□□□□□ -0.38
VARS-223ENST00000474643 UBA52P62987 128 aaKnown RBP12.67□□□□□ -0.38
VARS-223ENST00000474643 IL5RAQ01344 420 aa12.67□□□□□ -0.38
VARS-223ENST00000474643 ROM1Q03395 351 aa12.67□□□□□ -0.38
VARS-223ENST00000474643 BAMBIQ13145 260 aa12.67□□□□□ -0.38
VARS-223ENST00000474643 KLBQ86Z14 1044 aa12.67□□□□□ -0.38
VARS-223ENST00000474643 YIPF7Q8N8F6 280 aa12.67□□□□□ -0.38
VARS-223ENST00000474643 BOLLQ8N9W6 283 aaKnown RBP12.67□□□□□ -0.38
VARS-223ENST00000474643 OR2T27Q8NH04 317 aa12.67□□□□□ -0.38
VARS-223ENST00000474643 RNFT2Q96EX2 444 aa12.67□□□□□ -0.38
VARS-223ENST00000474643 RGCCQ9H4X1 137 aa12.67□□□□□ -0.38
VARS-223ENST00000474643 ZMAT3Q9HA38 289 aaKnown RBP12.67□□□□□ -0.38
VARS-223ENST00000474643 PCDHGB1Q9Y5G3 927 aa12.67□□□□□ -0.38
VARS-223ENST00000474643 IGHV3OR16-10A0A075B7F0 116 aa12.66□□□□□ -0.38
VARS-223ENST00000474643 IRGMA1A4Y4 181 aa12.66□□□□□ -0.38
VARS-223ENST00000474643 TMEM89A2RUT3 159 aa12.66□□□□□ -0.38
VARS-223ENST00000474643 A8MXK9 166 aa12.66□□□□□ -0.38
VARS-223ENST00000474643 F5H0A9 414 aaPredicted RBP12.66□□□□□ -0.38
VARS-223ENST00000474643 LOC110117498-PIK3R3F6TDL0 507 aa12.66□□□□□ -0.38
VARS-223ENST00000474643 MAGEB4O15481 346 aaPredicted RBP12.66□□□□□ -0.38
VARS-223ENST00000474643 MLNRO43193 412 aa12.66□□□□□ -0.38
VARS-223ENST00000474643 GMDSO60547 372 aa12.66□□□□□ -0.38
VARS-223ENST00000474643 WBP4O75554 376 aaKnown RBP12.66□□□□□ -0.38
VARS-223ENST00000474643 RPP14O95059 124 aaKnown RBP12.66□□□□□ -0.38
VARS-223ENST00000474643 FAM3AP98173 230 aa12.66□□□□□ -0.38
VARS-223ENST00000474643 EGR3Q06889 387 aa12.66□□□□□ -0.38
VARS-223ENST00000474643 MZT1Q08AG7 82 aa12.66□□□□□ -0.38
VARS-223ENST00000474643 ZNF181Q2M3W8 571 aa12.66□□□□□ -0.38
VARS-223ENST00000474643 PRSS45Q7RTY3 260 aa12.66□□□□□ -0.38
VARS-223ENST00000474643 FAM220AQ7Z4H9 259 aa12.66□□□□□ -0.38
VARS-223ENST00000474643 FTMTQ8N4E7 242 aa12.66□□□□□ -0.38
VARS-223ENST00000474643 OR8B12Q8NGG6 310 aa12.66□□□□□ -0.38
VARS-223ENST00000474643 OR8S1Q8NH09 359 aa12.66□□□□□ -0.38
VARS-223ENST00000474643 ERGIC1Q969X5 290 aa12.66□□□□□ -0.38
VARS-223ENST00000474643 SPSB4Q96A44 273 aa12.66□□□□□ -0.38
VARS-223ENST00000474643 SLC25A28Q96A46 364 aa12.66□□□□□ -0.38
VARS-223ENST00000474643 TECTBQ96PL2 329 aa12.66□□□□□ -0.38
VARS-223ENST00000474643 DUX5Q96PT3 197 aa12.66□□□□□ -0.38
VARS-223ENST00000474643 MYCBPQ99417 103 aaPredicted RBP12.66□□□□□ -0.38
VARS-223ENST00000474643 TMEM246Q9BRR3 403 aa12.66□□□□□ -0.38
VARS-223ENST00000474643 PBOV1Q9GZY1 135 aa12.66□□□□□ -0.38
VARS-223ENST00000474643 MRPL15Q9P015 296 aaKnown RBP12.66□□□□□ -0.38
VARS-223ENST00000474643 AASSQ9UDR5 926 aa12.66□□□□□ -0.38
VARS-223ENST00000474643 ZNF391Q9UJN7 358 aa12.66□□□□□ -0.38
VARS-223ENST00000474643 RPL36Q9Y3U8 105 aaKnown RBP12.66□□□□□ -0.38
VARS-223ENST00000474643 hCG_38984A0A1B0GV85 526 aa12.65□□□□□ -0.38
VARS-223ENST00000474643 A0A1W2PQL4 384 aaPredicted RBP12.65□□□□□ -0.38
VARS-223ENST00000474643 hCG_1807616A0A1W2PRN6 198 aa12.65□□□□□ -0.38
VARS-223ENST00000474643 ACOD1A6NK06 481 aa12.65□□□□□ -0.38
VARS-223ENST00000474643 A6NLC8 198 aa12.65□□□□□ -0.38
VARS-223ENST00000474643 CCDC159P0C7I6 412 aa12.65□□□□□ -0.38
VARS-223ENST00000474643 DCTDP32321 178 aa12.65□□□□□ -0.38
VARS-223ENST00000474643 GSK3AP49840 483 aa12.65□□□□□ -0.38
VARS-223ENST00000474643 ACTC1P68032 377 aa12.65□□□□□ -0.38
VARS-223ENST00000474643 ACTA1P68133 377 aa12.65□□□□□ -0.38
VARS-223ENST00000474643 FOXL1Q12952 345 aa12.65□□□□□ -0.38
VARS-223ENST00000474643 OR8B8Q15620 311 aa12.65□□□□□ -0.38
VARS-223ENST00000474643 ZNF404Q494X3 552 aa12.65□□□□□ -0.38
VARS-223ENST00000474643 BCL2L15Q5TBC7 163 aa12.65□□□□□ -0.38
VARS-223ENST00000474643 PLEKHG7Q6ZR37 379 aa12.65□□□□□ -0.38
VARS-223ENST00000474643 CELF2-AS1Q8N7Q2 184 aa12.65□□□□□ -0.38
VARS-223ENST00000474643 CSNK2A3Q8NEV1 391 aa12.65□□□□□ -0.38
VARS-223ENST00000474643 APH1BQ8WW43 257 aa12.65□□□□□ -0.38
VARS-223ENST00000474643 DVL3Q92997 716 aaPredicted RBP12.65□□□□□ -0.38
VARS-223ENST00000474643 PAPOLGQ9BWT3 736 aaKnown RBP12.65□□□□□ -0.38
VARS-223ENST00000474643 YTHDF1Q9BYJ9 559 aaKnown RBP12.65□□□□□ -0.38
VARS-223ENST00000474643 TMEM165Q9HC07 324 aa12.65□□□□□ -0.38
VARS-223ENST00000474643 TRIM36Q9NQ86 728 aa12.65□□□□□ -0.38
VARS-223ENST00000474643 ZNF319Q9P2F9 582 aa12.65□□□□□ -0.38
VARS-223ENST00000474643 ZNF69Q9UC07 566 aa12.65□□□□□ -0.38
VARS-223ENST00000474643 POLR3KQ9Y2Y1 108 aaPredicted RBP12.65□□□□□ -0.38
VARS-223ENST00000474643 TRAV40A0A0B4J280 105 aa12.64□□□□□ -0.39
VARS-223ENST00000474643 IGHV2-70DA0A0C4DH43 119 aa12.64□□□□□ -0.39
VARS-223ENST00000474643 DAPL1A0PJW8 107 aa12.64□□□□□ -0.39
VARS-223ENST00000474643 DNAJC9-AS1A6NH13 148 aa12.64□□□□□ -0.39
VARS-223ENST00000474643 METTL15A6NJ78 407 aa12.64□□□□□ -0.39
VARS-223ENST00000474643 PRR32B1ATL7 298 aa12.64□□□□□ -0.39
VARS-223ENST00000474643 FAM20BO75063 409 aa12.64□□□□□ -0.39
VARS-223ENST00000474643 CLIC3O95833 236 aa12.64□□□□□ -0.39
VARS-223ENST00000474643 FSHBP01225 129 aa12.64□□□□□ -0.39
VARS-223ENST00000474643 WNT2P09544 360 aa12.64□□□□□ -0.39
VARS-223ENST00000474643 PIPP12273 146 aaPredicted RBP12.64□□□□□ -0.39
VARS-223ENST00000474643 COMPP49747 757 aaPredicted RBP12.64□□□□□ -0.39
VARS-223ENST00000474643 RAB40BQ12829 278 aa12.64□□□□□ -0.39
VARS-223ENST00000474643 MED21Q13503 144 aa12.64□□□□□ -0.39
VARS-223ENST00000474643 KLHL22Q53GT1 634 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms