RNA–Protein interactions for RNA: ENST00000474056.5

UPF3A-203, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 748 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-203ENST00000474056 ZFAND2BQ8WV99 257 aa14.91□□□□□ -0.02
UPF3A-203ENST00000474056 OR5P3Q8WZ94 311 aa14.91□□□□□ -0.02
UPF3A-203ENST00000474056 SEH1LQ96EE3 360 aa14.91□□□□□ -0.02
UPF3A-203ENST00000474056 PKP2Q99959 881 aa14.91□□□□□ -0.02
UPF3A-203ENST00000474056 APOL4Q9BPW4 351 aa14.91□□□□□ -0.02
UPF3A-203ENST00000474056 RTL8AQ9BWD3 113 aa14.91□□□□□ -0.02
UPF3A-203ENST00000474056 RASSF4Q9H2L5 321 aa14.91□□□□□ -0.02
UPF3A-203ENST00000474056 TRIM36Q9NQ86 728 aa14.91□□□□□ -0.02
UPF3A-203ENST00000474056 HAO2Q9NYQ3 351 aa14.91□□□□□ -0.02
UPF3A-203ENST00000474056 IGHV3OR16-10A0A075B7F0 116 aa14.9□□□□□ -0.02
UPF3A-203ENST00000474056 TRAV40A0A0B4J280 105 aa14.9□□□□□ -0.02
UPF3A-203ENST00000474056 KIR2DS1A0A191URI9 304 aa14.9□□□□□ -0.02
UPF3A-203ENST00000474056 SRRM5B3KS81 715 aa14.9□□□□□ -0.02
UPF3A-203ENST00000474056 H3BNX3 289 aa14.9□□□□□ -0.02
UPF3A-203ENST00000474056 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.9□□□□□ -0.02
UPF3A-203ENST00000474056 SRSF10O75494 262 aaKnown RBP14.9□□□□□ -0.02
UPF3A-203ENST00000474056 IGLV3-1P01715 115 aa14.9□□□□□ -0.02
UPF3A-203ENST00000474056 IGHV4-38-2P0DP08 117 aa14.9□□□□□ -0.02
UPF3A-203ENST00000474056 FPR2P25090 351 aa14.9□□□□□ -0.02
UPF3A-203ENST00000474056 TUSC1Q2TAM9 212 aa14.9□□□□□ -0.02
UPF3A-203ENST00000474056 SSX6Q7RTT6 188 aa14.9□□□□□ -0.02
UPF3A-203ENST00000474056 COMMD2Q86X83 199 aa14.9□□□□□ -0.02
UPF3A-203ENST00000474056 ZDHHC23Q8IYP9 409 aa14.9□□□□□ -0.02
UPF3A-203ENST00000474056 BCL6BQ8N143 479 aaPredicted RBP14.9□□□□□ -0.02
UPF3A-203ENST00000474056 ZDHHC22Q8N966 263 aa14.9□□□□□ -0.02
UPF3A-203ENST00000474056 OR51E1Q8TCB6 317 aa14.9□□□□□ -0.02
UPF3A-203ENST00000474056 RPL3LQ92901 407 aaKnown RBP14.9□□□□□ -0.02
UPF3A-203ENST00000474056 FAM71F1Q96KD3 344 aaPredicted RBP14.9□□□□□ -0.02
UPF3A-203ENST00000474056 JMJD8Q96S16 334 aa14.9□□□□□ -0.02
UPF3A-203ENST00000474056 MNTQ99583 582 aa14.9□□□□□ -0.02
UPF3A-203ENST00000474056 RBM4BQ9BQ04 359 aaKnown RBP14.9□□□□□ -0.02
UPF3A-203ENST00000474056 ABCB9Q9NP78 766 aa14.9□□□□□ -0.02
UPF3A-203ENST00000474056 CLN6Q9NWW5 311 aa14.9□□□□□ -0.02
UPF3A-203ENST00000474056 NUFIP1Q9UHK0 495 aaKnown RBP14.9□□□□□ -0.02
UPF3A-203ENST00000474056 ZNF816-ZNF321PA0A0X1KG74 233 aa14.89□□□□□ -0.03
UPF3A-203ENST00000474056 A0A1B0GW55 424 aa14.89□□□□□ -0.03
UPF3A-203ENST00000474056 TMEM210A6NLX4 147 aa14.89□□□□□ -0.03
UPF3A-203ENST00000474056 ZNF670-ZNF695F2Z2N8 137 aa14.89□□□□□ -0.03
UPF3A-203ENST00000474056 NDUFA2O43678 99 aa14.89□□□□□ -0.03
UPF3A-203ENST00000474056 APOL3O95236 402 aa14.89□□□□□ -0.03
UPF3A-203ENST00000474056 TTRP02766 147 aa14.89□□□□□ -0.03
UPF3A-203ENST00000474056 DUX4L2P0CJ85 424 aa14.89□□□□□ -0.03
UPF3A-203ENST00000474056 DUX4L3P0CJ86 424 aa14.89□□□□□ -0.03
UPF3A-203ENST00000474056 DUX4L4P0CJ87 422 aa14.89□□□□□ -0.03
UPF3A-203ENST00000474056 DUX4L5P0CJ88 424 aa14.89□□□□□ -0.03
UPF3A-203ENST00000474056 DUX4L6P0CJ89 424 aa14.89□□□□□ -0.03
UPF3A-203ENST00000474056 DUX4L7P0CJ90 424 aa14.89□□□□□ -0.03
UPF3A-203ENST00000474056 PPIAL4GP0DN37 164 aa14.89□□□□□ -0.03
UPF3A-203ENST00000474056 MAP2K3P46734 347 aa14.89□□□□□ -0.03
UPF3A-203ENST00000474056 MICBQ29980 383 aa14.89□□□□□ -0.03
UPF3A-203ENST00000474056 DMRTC1Q5HYR2 192 aa14.89□□□□□ -0.03
UPF3A-203ENST00000474056 DUX4L9Q6RFH8 374 aaPredicted RBP14.89□□□□□ -0.03
UPF3A-203ENST00000474056 KCTD8Q6ZWB6 473 aa14.89□□□□□ -0.03
UPF3A-203ENST00000474056 SIGLECL1Q8N7X8 197 aa14.89□□□□□ -0.03
UPF3A-203ENST00000474056 UPRTQ96BW1 309 aa14.89□□□□□ -0.03
UPF3A-203ENST00000474056 RNF170Q96K19 258 aa14.89□□□□□ -0.03
UPF3A-203ENST00000474056 TBX5Q99593 518 aa14.89□□□□□ -0.03
UPF3A-203ENST00000474056 GPR84Q9NQS5 396 aa14.89□□□□□ -0.03
UPF3A-203ENST00000474056 DUX4Q9UBX2 424 aa14.89□□□□□ -0.03
UPF3A-203ENST00000474056 MRM2Q9UI43 246 aaKnown RBP14.89□□□□□ -0.03
UPF3A-203ENST00000474056 GTF2A1LQ9UNN4 478 aa14.89□□□□□ -0.03
UPF3A-203ENST00000474056 LOC110117498-PIK3R3F6TDL0 507 aa14.88□□□□□ -0.03
UPF3A-203ENST00000474056 TRIM77I1YAP6 450 aa14.88□□□□□ -0.03
UPF3A-203ENST00000474056 TMPRSS2O15393 492 aa14.88□□□□□ -0.03
UPF3A-203ENST00000474056 ENSAO43768 121 aaKnown RBP14.88□□□□□ -0.03
UPF3A-203ENST00000474056 MUC1P15941 1255 aaPredicted RBP14.88□□□□□ -0.03
UPF3A-203ENST00000474056 CFHR2P36980 270 aa14.88□□□□□ -0.03
UPF3A-203ENST00000474056 GPM6AP51674 278 aa14.88□□□□□ -0.03
UPF3A-203ENST00000474056 GMFBP60983 142 aa14.88□□□□□ -0.03
UPF3A-203ENST00000474056 FGF12P61328 243 aa14.88□□□□□ -0.03
UPF3A-203ENST00000474056 FAM76BQ5HYJ3 339 aa14.88□□□□□ -0.03
UPF3A-203ENST00000474056 CEP78Q5JTW2 689 aa14.88□□□□□ -0.03
UPF3A-203ENST00000474056 KRT74Q7RTS7 529 aa14.88□□□□□ -0.03
UPF3A-203ENST00000474056 FGFRL1Q8N441 504 aa14.88□□□□□ -0.03
UPF3A-203ENST00000474056 SCCPDHQ8NBX0 429 aa14.88□□□□□ -0.03
UPF3A-203ENST00000474056 ZNF48Q96MX3 618 aaPredicted RBP14.88□□□□□ -0.03
UPF3A-203ENST00000474056 MS4A7Q9GZW8 240 aaPredicted RBP14.88□□□□□ -0.03
UPF3A-203ENST00000474056 KAAG1Q9UBP8 84 aa14.88□□□□□ -0.03
UPF3A-203ENST00000474056 WARS2Q9UGM6 360 aaKnown RBP14.88□□□□□ -0.03
UPF3A-203ENST00000474056 SOX21Q9Y651 276 aaPredicted RBP14.88□□□□□ -0.03
UPF3A-203ENST00000474056 R4GMQ9 66 aa14.88□□□□□ -0.03
UPF3A-203ENST00000474056 DVL1O14640 695 aa14.87□□□□□ -0.03
UPF3A-203ENST00000474056 EI24O14681 340 aa14.87□□□□□ -0.03
UPF3A-203ENST00000474056 PLATP00750 562 aa14.87□□□□□ -0.03
UPF3A-203ENST00000474056 ALPLP05186 524 aa14.87□□□□□ -0.03
UPF3A-203ENST00000474056 ATP6V1B1P15313 513 aa14.87□□□□□ -0.03
UPF3A-203ENST00000474056 FAHP16930 419 aa14.87□□□□□ -0.03
UPF3A-203ENST00000474056 HTR1FP30939 366 aa14.87□□□□□ -0.03
UPF3A-203ENST00000474056 EGR3Q06889 387 aa14.87□□□□□ -0.03
UPF3A-203ENST00000474056 RIPPLY1Q0D2K3 151 aa14.87□□□□□ -0.03
UPF3A-203ENST00000474056 WDR38Q5JTN6 314 aa14.87□□□□□ -0.03
UPF3A-203ENST00000474056 CD276Q5ZPR3 534 aa14.87□□□□□ -0.03
UPF3A-203ENST00000474056 ZFP1Q6P2D0 407 aa14.87□□□□□ -0.03
UPF3A-203ENST00000474056 OR8J1Q8NGP2 316 aa14.87□□□□□ -0.03
UPF3A-203ENST00000474056 OR10Z1Q8NGY1 313 aa14.87□□□□□ -0.03
UPF3A-203ENST00000474056 FAM216AQ8WUB2 273 aa14.87□□□□□ -0.03
UPF3A-203ENST00000474056 EME1Q96AY2 570 aa14.87□□□□□ -0.03
UPF3A-203ENST00000474056 CCL13Q99616 98 aa14.87□□□□□ -0.03
UPF3A-203ENST00000474056 WDR13Q9H1Z4 485 aa14.87□□□□□ -0.03
UPF3A-203ENST00000474056 MOB1AQ9H8S9 216 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 103 ms