RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 NANOGP1Q8N7R0 232 aa11.05□□□□□ -0.64
TPM3-216ENST00000473036 OR51E1Q8TCB6 317 aa11.05□□□□□ -0.64
TPM3-216ENST00000473036 CCL17Q92583 94 aa11.05□□□□□ -0.64
TPM3-216ENST00000473036 DIRC2Q96SL1 478 aa11.05□□□□□ -0.64
TPM3-216ENST00000473036 MRPS26Q9BYN8 205 aaKnown RBP11.05□□□□□ -0.64
TPM3-216ENST00000473036 ISG20L2Q9H9L3 353 aaKnown RBP11.05□□□□□ -0.64
TPM3-216ENST00000473036 ISYNA1Q9NPH2 558 aa11.05□□□□□ -0.64
TPM3-216ENST00000473036 GPR84Q9NQS5 396 aa11.05□□□□□ -0.64
TPM3-216ENST00000473036 ACOXLQ9NUZ1 547 aa11.05□□□□□ -0.64
TPM3-216ENST00000473036 TMEM160Q9NX00 188 aa11.05□□□□□ -0.64
TPM3-216ENST00000473036 MRPL15Q9P015 296 aaKnown RBP11.05□□□□□ -0.64
TPM3-216ENST00000473036 ERVK-18Q9QC07 812 aa11.05□□□□□ -0.64
TPM3-216ENST00000473036 NUFIP1Q9UHK0 495 aaKnown RBP11.05□□□□□ -0.64
TPM3-216ENST00000473036 WIPI2Q9Y4P8 454 aa11.05□□□□□ -0.64
TPM3-216ENST00000473036 A8MV72 311 aaPredicted RBP11.04□□□□□ -0.64
TPM3-216ENST00000473036 PTBP3O95758 552 aaKnown RBP11.04□□□□□ -0.64
TPM3-216ENST00000473036 CD200P41217 278 aa11.04□□□□□ -0.64
TPM3-216ENST00000473036 KIR3DL2P43630 455 aa11.04□□□□□ -0.64
TPM3-216ENST00000473036 GPR6P46095 362 aaPredicted RBP11.04□□□□□ -0.64
TPM3-216ENST00000473036 WNT4P56705 351 aa11.04□□□□□ -0.64
TPM3-216ENST00000473036 NANOS3P60323 173 aaKnown RBP11.04□□□□□ -0.64
TPM3-216ENST00000473036 LMO4P61968 165 aa11.04□□□□□ -0.64
TPM3-216ENST00000473036 ACSM1Q08AH1 577 aa11.04□□□□□ -0.64
TPM3-216ENST00000473036 ZNF829Q3KNS6 432 aaPredicted RBP11.04□□□□□ -0.64
TPM3-216ENST00000473036 DMRTC1Q5HYR2 192 aa11.04□□□□□ -0.64
TPM3-216ENST00000473036 FAM201AQ5SY85 155 aa11.04□□□□□ -0.64
TPM3-216ENST00000473036 KRT74Q7RTS7 529 aa11.04□□□□□ -0.64
TPM3-216ENST00000473036 LHFPL3Q86UP9 236 aa11.04□□□□□ -0.64
TPM3-216ENST00000473036 MOGAT3Q86VF5 341 aa11.04□□□□□ -0.64
TPM3-216ENST00000473036 C11orf53Q8IXP5 236 aa11.04□□□□□ -0.64
TPM3-216ENST00000473036 ELMOD2Q8IZ81 293 aa11.04□□□□□ -0.64
TPM3-216ENST00000473036 SPARTQ8N0X7 666 aa11.04□□□□□ -0.64
TPM3-216ENST00000473036 YIPF7Q8N8F6 280 aa11.04□□□□□ -0.64
TPM3-216ENST00000473036 CLDND2Q8NHS1 167 aa11.04□□□□□ -0.64
TPM3-216ENST00000473036 ADAT1Q9BUB4 502 aaKnown RBP11.04□□□□□ -0.64
TPM3-216ENST00000473036 ALG8Q9BVK2 526 aa11.04□□□□□ -0.64
TPM3-216ENST00000473036 EGLN1Q9GZT9 426 aa11.04□□□□□ -0.64
TPM3-216ENST00000473036 OPA3Q9H6K4 179 aa11.04□□□□□ -0.64
TPM3-216ENST00000473036 NARFLQ9H6Q4 476 aa11.04□□□□□ -0.64
TPM3-216ENST00000473036 TRIM36Q9NQ86 728 aa11.04□□□□□ -0.64
TPM3-216ENST00000473036 TMEM106BQ9NUM4 274 aa11.04□□□□□ -0.64
TPM3-216ENST00000473036 BABAM2Q9NXR7 383 aa11.04□□□□□ -0.64
TPM3-216ENST00000473036 OR52A1Q9UKL2 312 aa11.04□□□□□ -0.64
TPM3-216ENST00000473036 C3orf80F5H4A9 247 aa11.03□□□□□ -0.64
TPM3-216ENST00000473036 LOC110117498-PIK3R3F6TDL0 507 aa11.03□□□□□ -0.64
TPM3-216ENST00000473036 P2RY10O00398 339 aa11.03□□□□□ -0.64
TPM3-216ENST00000473036 LMX1BO60663 402 aa11.03□□□□□ -0.64
TPM3-216ENST00000473036 ZNF205O95201 554 aa11.03□□□□□ -0.64
TPM3-216ENST00000473036 CYB5R3P00387 301 aaPredicted RBP11.03□□□□□ -0.64
TPM3-216ENST00000473036 LIMS3P0CW19 117 aa11.03□□□□□ -0.64
TPM3-216ENST00000473036 LIMS4P0CW20 117 aa11.03□□□□□ -0.64
TPM3-216ENST00000473036 C21orf33P30042 268 aaPredicted RBP11.03□□□□□ -0.64
TPM3-216ENST00000473036 GATA4P43694 442 aa11.03□□□□□ -0.64
TPM3-216ENST00000473036 GPR50Q13585 617 aa11.03□□□□□ -0.64
TPM3-216ENST00000473036 DOC2BQ14184 412 aa11.03□□□□□ -0.64
TPM3-216ENST00000473036 IRF3Q14653 427 aa11.03□□□□□ -0.64
TPM3-216ENST00000473036 SPHARQ15513 63 aa11.03□□□□□ -0.64
TPM3-216ENST00000473036 OR8G1Q15617 311 aa11.03□□□□□ -0.64
TPM3-216ENST00000473036 HFEQ30201 348 aa11.03□□□□□ -0.64
TPM3-216ENST00000473036 WDR38Q5JTN6 314 aa11.03□□□□□ -0.64
TPM3-216ENST00000473036 Q6ZSR3 168 aa11.03□□□□□ -0.64
TPM3-216ENST00000473036 ZNF367Q7RTV3 350 aa11.03□□□□□ -0.64
TPM3-216ENST00000473036 PLPP7Q8NBV4 271 aa11.03□□□□□ -0.64
TPM3-216ENST00000473036 HPSE2Q8WWQ2 592 aa11.03□□□□□ -0.64
TPM3-216ENST00000473036 MSI2Q96DH6 328 aaKnown RBP11.03□□□□□ -0.64
TPM3-216ENST00000473036 ITPKCQ96DU7 683 aa11.03□□□□□ -0.64
TPM3-216ENST00000473036 PELI1Q96FA3 418 aa11.03□□□□□ -0.64
TPM3-216ENST00000473036 C1orf159Q96HA4 380 aa11.03□□□□□ -0.64
TPM3-216ENST00000473036 RGCCQ9H4X1 137 aa11.03□□□□□ -0.64
TPM3-216ENST00000473036 MOB1AQ9H8S9 216 aa11.03□□□□□ -0.64
TPM3-216ENST00000473036 PAK1IP1Q9NWT1 392 aaPredicted RBP11.03□□□□□ -0.64
TPM3-216ENST00000473036 LPAR3Q9UBY5 353 aa11.03□□□□□ -0.64
TPM3-216ENST00000473036 GNG8Q9UK08 70 aa11.03□□□□□ -0.64
TPM3-216ENST00000473036 A6NIN4 97 aa11.02□□□□□ -0.65
TPM3-216ENST00000473036 TRIM64CA6NLI5 447 aa11.02□□□□□ -0.65
TPM3-216ENST00000473036 FAM157AC9JC47 383 aa11.02□□□□□ -0.65
TPM3-216ENST00000473036 E9PI62 339 aa11.02□□□□□ -0.65
TPM3-216ENST00000473036 TMEM178BH3BS89 294 aa11.02□□□□□ -0.65
TPM3-216ENST00000473036 H3BSH0 61 aa11.02□□□□□ -0.65
TPM3-216ENST00000473036 PHF1O43189 567 aaPredicted RBP11.02□□□□□ -0.65
TPM3-216ENST00000473036 GMDSO60547 372 aa11.02□□□□□ -0.65
TPM3-216ENST00000473036 IGHV2-70P01814 119 aa11.02□□□□□ -0.65
TPM3-216ENST00000473036 MT-ND2P03891 347 aa11.02□□□□□ -0.65
TPM3-216ENST00000473036 TNFSF4P23510 183 aa11.02□□□□□ -0.65
TPM3-216ENST00000473036 DDOSTP39656 456 aa11.02□□□□□ -0.65
TPM3-216ENST00000473036 TGM4P49221 684 aa11.02□□□□□ -0.65
TPM3-216ENST00000473036 ETV1P50549 477 aa11.02□□□□□ -0.65
TPM3-216ENST00000473036 EMX1Q04741 257 aaPredicted RBP11.02□□□□□ -0.65
TPM3-216ENST00000473036 ZMYND11Q15326 602 aa11.02□□□□□ -0.65
TPM3-216ENST00000473036 ODF4Q2M2E3 257 aa11.02□□□□□ -0.65
TPM3-216ENST00000473036 RPL22L1Q6P5R6 122 aaKnown RBP11.02□□□□□ -0.65
TPM3-216ENST00000473036 ZNF826PQ6ZT77 177 aa11.02□□□□□ -0.65
TPM3-216ENST00000473036 RDH10Q8IZV5 341 aa11.02□□□□□ -0.65
TPM3-216ENST00000473036 CCDC54Q8NEL0 328 aa11.02□□□□□ -0.65
TPM3-216ENST00000473036 OR14K1Q8NGZ2 314 aa11.02□□□□□ -0.65
TPM3-216ENST00000473036 THRSPQ92748 146 aa11.02□□□□□ -0.65
TPM3-216ENST00000473036 FAM71F1Q96KD3 344 aaPredicted RBP11.02□□□□□ -0.65
TPM3-216ENST00000473036 ACOT13Q9NPJ3 140 aa11.02□□□□□ -0.65
TPM3-216ENST00000473036 YAE1D1Q9NRH1 226 aa11.02□□□□□ -0.65
TPM3-216ENST00000473036 UFSP2Q9NUQ7 469 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms