RNA–Protein interactions for RNA: ENST00000471455.1

CPSF4-211, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-211ENST00000471455 FN3KQ9H479 309 aa7.47□□□□□ -1.21
CPSF4-211ENST00000471455 TOR3AQ9H497 397 aa7.47□□□□□ -1.21
CPSF4-211ENST00000471455 RGCCQ9H4X1 137 aa7.47□□□□□ -1.21
CPSF4-211ENST00000471455 VIPAS39Q9H9C1 493 aa7.47□□□□□ -1.21
CPSF4-211ENST00000471455 FGFR1OP2Q9NVK5 253 aa7.47□□□□□ -1.21
CPSF4-211ENST00000471455 ARGLU1Q9NWB6 273 aaPredicted RBP7.47□□□□□ -1.21
CPSF4-211ENST00000471455 MRPL22Q9NWU5 206 aaKnown RBP7.47□□□□□ -1.21
CPSF4-211ENST00000471455 SF3B6Q9Y3B4 125 aaKnown RBP7.47□□□□□ -1.21
CPSF4-211ENST00000471455 MAB21L2Q9Y586 359 aa7.47□□□□□ -1.21
CPSF4-211ENST00000471455 TRBV23-1A0A0A0MS06 115 aa7.46□□□□□ -1.22
CPSF4-211ENST00000471455 A0A1W2PPH5 198 aa7.46□□□□□ -1.22
CPSF4-211ENST00000471455 TMEM210A6NLX4 147 aa7.46□□□□□ -1.22
CPSF4-211ENST00000471455 H3BUX3 64 aa7.46□□□□□ -1.22
CPSF4-211ENST00000471455 ACOT8O14734 319 aa7.46□□□□□ -1.22
CPSF4-211ENST00000471455 CCDC22O60826 627 aa7.46□□□□□ -1.22
CPSF4-211ENST00000471455 ANXA2P07355 339 aaKnown RBP7.46□□□□□ -1.22
CPSF4-211ENST00000471455 POU1F1P28069 291 aa7.46□□□□□ -1.22
CPSF4-211ENST00000471455 HSD11B1P28845 292 aa7.46□□□□□ -1.22
CPSF4-211ENST00000471455 FMO3P31513 532 aa7.46□□□□□ -1.22
CPSF4-211ENST00000471455 KIR2DS4P43632 304 aa7.46□□□□□ -1.22
CPSF4-211ENST00000471455 ENTPD1P49961 510 aa7.46□□□□□ -1.22
CPSF4-211ENST00000471455 NUDT2P50583 147 aa7.46□□□□□ -1.22
CPSF4-211ENST00000471455 PRKXP51817 358 aa7.46□□□□□ -1.22
CPSF4-211ENST00000471455 EFNB2P52799 333 aa7.46□□□□□ -1.22
CPSF4-211ENST00000471455 LOXL3P58215 753 aa7.46□□□□□ -1.22
CPSF4-211ENST00000471455 LRRC75BQ2VPJ9 315 aa7.46□□□□□ -1.22
CPSF4-211ENST00000471455 ATPAF1Q5TC12 328 aaPredicted RBP7.46□□□□□ -1.22
CPSF4-211ENST00000471455 STUMQ69YW2 141 aa7.46□□□□□ -1.22
CPSF4-211ENST00000471455 WDR82Q6UXN9 313 aa7.46□□□□□ -1.22
CPSF4-211ENST00000471455 Q6ZPA2 131 aa7.46□□□□□ -1.22
CPSF4-211ENST00000471455 KRTAP19-1Q8IUB9 90 aa7.46□□□□□ -1.22
CPSF4-211ENST00000471455 KLHDC1Q8N7A1 406 aa7.46□□□□□ -1.22
CPSF4-211ENST00000471455 OR10Z1Q8NGY1 313 aa7.46□□□□□ -1.22
CPSF4-211ENST00000471455 MRAPQ8TCY5 172 aa7.46□□□□□ -1.22
CPSF4-211ENST00000471455 GNPDA2Q8TDQ7 276 aa7.46□□□□□ -1.22
CPSF4-211ENST00000471455 SLAMF6Q96DU3 332 aa7.46□□□□□ -1.22
CPSF4-211ENST00000471455 REEP6Q96HR9 211 aa7.46□□□□□ -1.22
CPSF4-211ENST00000471455 HRASLS5Q96KN8 279 aa7.46□□□□□ -1.22
CPSF4-211ENST00000471455 PAPOLGQ9BWT3 736 aaKnown RBP7.46□□□□□ -1.22
CPSF4-211ENST00000471455 OR10A2Q9H208 303 aa7.46□□□□□ -1.22
CPSF4-211ENST00000471455 SPAG4Q9NPE6 437 aa7.46□□□□□ -1.22
CPSF4-211ENST00000471455 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.46□□□□□ -1.22
CPSF4-211ENST00000471455 CENPMQ9NSP4 180 aa7.46□□□□□ -1.22
CPSF4-211ENST00000471455 MBNL3Q9NUK0 354 aaKnown RBP7.46□□□□□ -1.22
CPSF4-211ENST00000471455 DCAF13Q9NV06 445 aaKnown RBP7.46□□□□□ -1.22
CPSF4-211ENST00000471455 NECAP2Q9NVZ3 263 aa7.46□□□□□ -1.22
CPSF4-211ENST00000471455 HAO2Q9NYQ3 351 aa7.46□□□□□ -1.22
CPSF4-211ENST00000471455 SLC25A10Q9UBX3 287 aaPredicted RBP7.46□□□□□ -1.22
CPSF4-211ENST00000471455 N6AMT1Q9Y5N5 214 aa7.46□□□□□ -1.22
CPSF4-211ENST00000471455 CDH10Q9Y6N8 788 aa7.46□□□□□ -1.22
CPSF4-211ENST00000471455 COMMD3-BMI1R4GMX3 469 aa7.46□□□□□ -1.22
CPSF4-211ENST00000471455 PLXNB1O43157 2135 aa7.45□□□□□ -1.22
CPSF4-211ENST00000471455 A0A1W2PRD5 423 aa7.45□□□□□ -1.22
CPSF4-211ENST00000471455 A0A1W2PRF3 423 aa7.45□□□□□ -1.22
CPSF4-211ENST00000471455 A0A1W2PRM7 423 aa7.45□□□□□ -1.22
CPSF4-211ENST00000471455 TVP23AA6NH52 213 aa7.45□□□□□ -1.22
CPSF4-211ENST00000471455 H0YAE9 185 aa7.45□□□□□ -1.22
CPSF4-211ENST00000471455 GLCEO94923 617 aa7.45□□□□□ -1.22
CPSF4-211ENST00000471455 DIRAS1O95057 198 aa7.45□□□□□ -1.22
CPSF4-211ENST00000471455 SLC2A1P11166 492 aa7.45□□□□□ -1.22
CPSF4-211ENST00000471455 COX4I1P13073 169 aa7.45□□□□□ -1.22
CPSF4-211ENST00000471455 NCK1P16333 377 aa7.45□□□□□ -1.22
CPSF4-211ENST00000471455 NDUFB7P17568 137 aa7.45□□□□□ -1.22
CPSF4-211ENST00000471455 PYCR1P32322 319 aa7.45□□□□□ -1.22
CPSF4-211ENST00000471455 GSSP48637 474 aa7.45□□□□□ -1.22
CPSF4-211ENST00000471455 TGM4P49221 684 aa7.45□□□□□ -1.22
CPSF4-211ENST00000471455 CX3CR1P49238 355 aa7.45□□□□□ -1.22
CPSF4-211ENST00000471455 CAV3P56539 151 aa7.45□□□□□ -1.22
CPSF4-211ENST00000471455 CSNK2BP67870 215 aa7.45□□□□□ -1.22
CPSF4-211ENST00000471455 EMX1Q04741 257 aaPredicted RBP7.45□□□□□ -1.22
CPSF4-211ENST00000471455 TSPAN31Q12999 210 aa7.45□□□□□ -1.22
CPSF4-211ENST00000471455 SLC35F1Q5T1Q4 408 aa7.45□□□□□ -1.22
CPSF4-211ENST00000471455 GLYATQ6IB77 296 aa7.45□□□□□ -1.22
CPSF4-211ENST00000471455 SLC16A9Q7RTY1 509 aa7.45□□□□□ -1.22
CPSF4-211ENST00000471455 LINC00471Q8N535 108 aa7.45□□□□□ -1.22
CPSF4-211ENST00000471455 OR4F17Q8NGA8 305 aa7.45□□□□□ -1.22
CPSF4-211ENST00000471455 CFHR4Q92496 578 aa7.45□□□□□ -1.22
CPSF4-211ENST00000471455 C7orf34Q96L11 122 aa7.45□□□□□ -1.22
CPSF4-211ENST00000471455 RAB3IPQ96QF0 476 aaPredicted RBP7.45□□□□□ -1.22
CPSF4-211ENST00000471455 OR4F4Q96R69 305 aa7.45□□□□□ -1.22
CPSF4-211ENST00000471455 SSX3Q99909 188 aa7.45□□□□□ -1.22
CPSF4-211ENST00000471455 FUZQ9BT04 418 aa7.45□□□□□ -1.22
CPSF4-211ENST00000471455 TLNRD1Q9H1K6 362 aa7.45□□□□□ -1.22
CPSF4-211ENST00000471455 ABCD2Q9UBJ2 740 aa7.45□□□□□ -1.22
CPSF4-211ENST00000471455 MPC1Q9Y5U8 109 aa7.45□□□□□ -1.22
CPSF4-211ENST00000471455 hCG_38984A0A1B0GV85 526 aa7.44□□□□□ -1.22
CPSF4-211ENST00000471455 A0A1B0GW55 424 aa7.44□□□□□ -1.22
CPSF4-211ENST00000471455 hCG_1809904A0A1W2PP81 198 aa7.44□□□□□ -1.22
CPSF4-211ENST00000471455 A0A1W2PPE2 198 aa7.44□□□□□ -1.22
CPSF4-211ENST00000471455 A0A1W2PR64 198 aa7.44□□□□□ -1.22
CPSF4-211ENST00000471455 A0A1W2PRV1 198 aa7.44□□□□□ -1.22
CPSF4-211ENST00000471455 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.44□□□□□ -1.22
CPSF4-211ENST00000471455 CDIPTO14735 213 aa7.44□□□□□ -1.22
CPSF4-211ENST00000471455 SIGLEC5O15389 551 aa7.44□□□□□ -1.22
CPSF4-211ENST00000471455 ANGPTL7O43827 346 aa7.44□□□□□ -1.22
CPSF4-211ENST00000471455 PEX14O75381 377 aa7.44□□□□□ -1.22
CPSF4-211ENST00000471455 FCN3O75636 299 aa7.44□□□□□ -1.22
CPSF4-211ENST00000471455 IFNGP01579 166 aa7.44□□□□□ -1.22
CPSF4-211ENST00000471455 DUX4L2P0CJ85 424 aa7.44□□□□□ -1.22
CPSF4-211ENST00000471455 DUX4L3P0CJ86 424 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms