RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 PCGF3Q3KNV8 242 aa16.22■□□□□ 0.19
CAPN3-209ENST00000466222 ZNF610Q8N9Z0 462 aa16.22■□□□□ 0.19
CAPN3-209ENST00000466222 OR10AC1Q8NH08 325 aa16.22■□□□□ 0.19
CAPN3-209ENST00000466222 IGSF10Q6WRI0 2623 aa16.22■□□□□ 0.19
CAPN3-209ENST00000466222 PLSCR5A0PG75 271 aa16.21■□□□□ 0.19
CAPN3-209ENST00000466222 OR6C65A6NJZ3 312 aa16.21■□□□□ 0.19
CAPN3-209ENST00000466222 RGS11O94810 467 aa16.21■□□□□ 0.19
CAPN3-209ENST00000466222 CGAP01215 116 aa16.21■□□□□ 0.19
CAPN3-209ENST00000466222 CD2P06729 351 aa16.21■□□□□ 0.19
CAPN3-209ENST00000466222 POU3F4P49335 361 aa16.21■□□□□ 0.19
CAPN3-209ENST00000466222 RIDAP52758 137 aaKnown RBP16.21■□□□□ 0.19
CAPN3-209ENST00000466222 OPCMLQ14982 345 aa16.21■□□□□ 0.19
CAPN3-209ENST00000466222 HIKESHIQ53FT3 197 aa16.21■□□□□ 0.19
CAPN3-209ENST00000466222 TOR2AQ5JU69 321 aa16.21■□□□□ 0.19
CAPN3-209ENST00000466222 GLT8D1Q68CQ7 371 aa16.21■□□□□ 0.19
CAPN3-209ENST00000466222 FAM166AQ6J272 317 aa16.21■□□□□ 0.19
CAPN3-209ENST00000466222 CKLFQ9UBR5 152 aa16.21■□□□□ 0.19
CAPN3-209ENST00000466222 DHDHQ9UQ10 334 aa16.21■□□□□ 0.19
CAPN3-209ENST00000466222 CFAP46Q8IYW2 2715 aa16.21■□□□□ 0.19
CAPN3-209ENST00000466222 LYZL6O75951 148 aa16.21■□□□□ 0.19
CAPN3-209ENST00000466222 IL2RAP01589 272 aa16.21■□□□□ 0.19
CAPN3-209ENST00000466222 HLA-HP01893 362 aa16.21■□□□□ 0.19
CAPN3-209ENST00000466222 H2BFMP0C1H6 154 aa16.21■□□□□ 0.19
CAPN3-209ENST00000466222 CD37P11049 281 aa16.21■□□□□ 0.19
CAPN3-209ENST00000466222 SFTPCP11686 197 aa16.21■□□□□ 0.19
CAPN3-209ENST00000466222 EDN3P14138 238 aa16.21■□□□□ 0.19
CAPN3-209ENST00000466222 ZNF32P17041 273 aa16.21■□□□□ 0.19
CAPN3-209ENST00000466222 ANXA7P20073 488 aaKnown RBP16.21■□□□□ 0.19
CAPN3-209ENST00000466222 IGHV1-2P23083 117 aa16.21■□□□□ 0.19
CAPN3-209ENST00000466222 SSTR2P30874 369 aa16.21■□□□□ 0.19
CAPN3-209ENST00000466222 PTGER4P35408 488 aa16.21■□□□□ 0.19
CAPN3-209ENST00000466222 ACTBP60709 375 aa16.21■□□□□ 0.19
CAPN3-209ENST00000466222 ACTG1P63261 375 aa16.21■□□□□ 0.19
CAPN3-209ENST00000466222 SLC16A14Q7RTX9 510 aa16.21■□□□□ 0.19
CAPN3-209ENST00000466222 SLC36A1Q7Z2H8 476 aa16.21■□□□□ 0.19
CAPN3-209ENST00000466222 OR51D1Q8NGF3 324 aa16.21■□□□□ 0.19
CAPN3-209ENST00000466222 OR51A4Q8NGJ6 313 aa16.21■□□□□ 0.19
CAPN3-209ENST00000466222 OR6K3Q8NGY3 331 aa16.21■□□□□ 0.19
CAPN3-209ENST00000466222 AKR7LQ8NHP1 331 aa16.21■□□□□ 0.19
CAPN3-209ENST00000466222 SUN5Q8TC36 379 aa16.21■□□□□ 0.19
CAPN3-209ENST00000466222 FAM3DQ96BQ1 224 aa16.21■□□□□ 0.19
CAPN3-209ENST00000466222 KIF25Q9UIL4 384 aa16.21■□□□□ 0.19
CAPN3-209ENST00000466222 GTF2A1LQ9UNN4 478 aa16.21■□□□□ 0.19
CAPN3-209ENST00000466222 SLC22A13Q9Y226 551 aa16.21■□□□□ 0.19
CAPN3-209ENST00000466222 ADGRG4Q8IZF6 3080 aa16.21■□□□□ 0.18
CAPN3-209ENST00000466222 CIB4A0PJX0 185 aa16.2■□□□□ 0.18
CAPN3-209ENST00000466222 MEGF11A6BM72 1044 aa16.2■□□□□ 0.18
CAPN3-209ENST00000466222 MELTFP08582 738 aa16.2■□□□□ 0.18
CAPN3-209ENST00000466222 DBHP09172 617 aa16.2■□□□□ 0.18
CAPN3-209ENST00000466222 SLC2A1P11166 492 aa16.2■□□□□ 0.18
CAPN3-209ENST00000466222 PRSS3P35030 304 aa16.2■□□□□ 0.18
CAPN3-209ENST00000466222 TIMP3P35625 211 aa16.2■□□□□ 0.18
CAPN3-209ENST00000466222 PRKXP51817 358 aa16.2■□□□□ 0.18
CAPN3-209ENST00000466222 CAPZA1P52907 286 aa16.2■□□□□ 0.18
CAPN3-209ENST00000466222 RSPO1Q2MKA7 263 aaPredicted RBP16.2■□□□□ 0.18
CAPN3-209ENST00000466222 SIGIRRQ6IA17 410 aa16.2■□□□□ 0.18
CAPN3-209ENST00000466222 ZNF774Q6NX45 483 aa16.2■□□□□ 0.18
CAPN3-209ENST00000466222 NAA40Q86UY6 237 aa16.2■□□□□ 0.18
CAPN3-209ENST00000466222 CATSPERDQ86XM0 798 aa16.2■□□□□ 0.18
CAPN3-209ENST00000466222 CDH26Q8IXH8 852 aa16.2■□□□□ 0.18
CAPN3-209ENST00000466222 OR4C16Q8NGL9 310 aa16.2■□□□□ 0.18
CAPN3-209ENST00000466222 GSX2Q9BZM3 304 aa16.2■□□□□ 0.18
CAPN3-209ENST00000466222 SCPEP1Q9HB40 452 aa16.2■□□□□ 0.18
CAPN3-209ENST00000466222 PLSCR4Q9NRQ2 329 aa16.2■□□□□ 0.18
CAPN3-209ENST00000466222 A0A0A6YYH2 397 aa16.19■□□□□ 0.18
CAPN3-209ENST00000466222 A6NJ64 397 aa16.19■□□□□ 0.18
CAPN3-209ENST00000466222 HMSDA8MTL9 139 aa16.19■□□□□ 0.18
CAPN3-209ENST00000466222 L7N2F9 121 aa16.19■□□□□ 0.18
CAPN3-209ENST00000466222 CST2P09228 141 aa16.19■□□□□ 0.18
CAPN3-209ENST00000466222 PTHLHP12272 177 aa16.19■□□□□ 0.18
CAPN3-209ENST00000466222 MPGP29372 298 aa16.19■□□□□ 0.18
CAPN3-209ENST00000466222 HIST1H3AP68431 136 aa16.19■□□□□ 0.18
CAPN3-209ENST00000466222 PSG4Q00888 419 aa16.19■□□□□ 0.18
CAPN3-209ENST00000466222 MPPED2Q15777 294 aa16.19■□□□□ 0.18
CAPN3-209ENST00000466222 HIST2H3PS2Q5TEC6 136 aa16.19■□□□□ 0.18
CAPN3-209ENST00000466222 HIST2H3AQ71DI3 136 aa16.19■□□□□ 0.18
CAPN3-209ENST00000466222 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.19■□□□□ 0.18
CAPN3-209ENST00000466222 GJC3Q8NFK1 279 aa16.19■□□□□ 0.18
CAPN3-209ENST00000466222 GINS4Q9BRT9 223 aa16.19■□□□□ 0.18
CAPN3-209ENST00000466222 CHIAQ9BZP6 476 aa16.19■□□□□ 0.18
CAPN3-209ENST00000466222 ALX4Q9H161 411 aaPredicted RBP16.19■□□□□ 0.18
CAPN3-209ENST00000466222 PLEK2Q9NYT0 353 aa16.19■□□□□ 0.18
CAPN3-209ENST00000466222 ZNF107Q9UII5 783 aaPredicted RBP16.19■□□□□ 0.18
CAPN3-209ENST00000466222 NUP50Q9UKX7 468 aa16.19■□□□□ 0.18
CAPN3-209ENST00000466222 EPG5Q9HCE0 2579 aa16.19■□□□□ 0.18
CAPN3-209ENST00000466222 A0A1W2PR80 420 aa16.19■□□□□ 0.18
CAPN3-209ENST00000466222 C5orf63A6NC05 138 aa16.19■□□□□ 0.18
CAPN3-209ENST00000466222 PYCARD-AS1I3L0S3 204 aa16.19■□□□□ 0.18
CAPN3-209ENST00000466222 SRSF10O75494 262 aaKnown RBP16.19■□□□□ 0.18
CAPN3-209ENST00000466222 CEACAM8P31997 349 aaPredicted RBP16.19■□□□□ 0.18
CAPN3-209ENST00000466222 C2orf76Q3KRA6 126 aa16.19■□□□□ 0.18
CAPN3-209ENST00000466222 FAM209AQ5JX71 171 aa16.19■□□□□ 0.18
CAPN3-209ENST00000466222 FAAP20Q6NZ36 180 aa16.19■□□□□ 0.18
CAPN3-209ENST00000466222 Q6ZT83 130 aa16.19■□□□□ 0.18
CAPN3-209ENST00000466222 COMMD7Q86VX2 200 aa16.19■□□□□ 0.18
CAPN3-209ENST00000466222 DHRS9Q9BPW9 319 aa16.19■□□□□ 0.18
CAPN3-209ENST00000466222 CA10Q9NS85 328 aa16.19■□□□□ 0.18
CAPN3-209ENST00000466222 PHF3Q92576 2039 aaKnown RBP16.18■□□□□ 0.18
CAPN3-209ENST00000466222 TRAV18A0A075B6X5 111 aa16.18■□□□□ 0.18
CAPN3-209ENST00000466222 A0A0G2JNJ9 132 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms