RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 ZNF485Q8NCK3 441 aa14.85□□□□□ -0.03
CPSF4-209ENST00000465132 GPR148Q8TDV2 347 aa14.85□□□□□ -0.03
CPSF4-209ENST00000465132 TECTBQ96PL2 329 aa14.85□□□□□ -0.03
CPSF4-209ENST00000465132 HIST1H2AAQ96QV6 131 aa14.85□□□□□ -0.03
CPSF4-209ENST00000465132 EGLN1Q9GZT9 426 aa14.85□□□□□ -0.03
CPSF4-209ENST00000465132 ACOT13Q9NPJ3 140 aa14.85□□□□□ -0.03
CPSF4-209ENST00000465132 FZR1Q9UM11 496 aa14.85□□□□□ -0.03
CPSF4-209ENST00000465132 ZNF281Q9Y2X9 895 aa14.85□□□□□ -0.03
CPSF4-209ENST00000465132 MPC1Q9Y5U8 109 aa14.85□□□□□ -0.03
CPSF4-209ENST00000465132 YLPM1P49750 1951 aaKnown RBP14.85□□□□□ -0.03
CPSF4-209ENST00000465132 ZNF816-ZNF321PA0A0X1KG74 233 aa14.84□□□□□ -0.03
CPSF4-209ENST00000465132 LOC107986453A0A1B0GWG9 222 aa14.84□□□□□ -0.03
CPSF4-209ENST00000465132 ANXA2P2A6NMY6 339 aa14.84□□□□□ -0.03
CPSF4-209ENST00000465132 OR4C45A6NMZ5 311 aa14.84□□□□□ -0.03
CPSF4-209ENST00000465132 NDUFS8O00217 210 aa14.84□□□□□ -0.03
CPSF4-209ENST00000465132 P2RY10O00398 339 aa14.84□□□□□ -0.03
CPSF4-209ENST00000465132 CLPTM1O96005 669 aa14.84□□□□□ -0.03
CPSF4-209ENST00000465132 IGLV3-1P01715 115 aa14.84□□□□□ -0.03
CPSF4-209ENST00000465132 HSMCR30P0CW71 290 aa14.84□□□□□ -0.03
CPSF4-209ENST00000465132 MAPK3P27361 379 aaPredicted RBP14.84□□□□□ -0.03
CPSF4-209ENST00000465132 EMX1Q04741 257 aaPredicted RBP14.84□□□□□ -0.03
CPSF4-209ENST00000465132 YIF1BQ5BJH7 314 aa14.84□□□□□ -0.03
CPSF4-209ENST00000465132 PRSS35Q8N3Z0 413 aa14.84□□□□□ -0.03
CPSF4-209ENST00000465132 PP6455Q8WZ26 134 aa14.84□□□□□ -0.03
CPSF4-209ENST00000465132 FAM71F1Q96KD3 344 aaPredicted RBP14.84□□□□□ -0.03
CPSF4-209ENST00000465132 SORCS2Q96PQ0 1159 aa14.84□□□□□ -0.03
CPSF4-209ENST00000465132 MGLLQ99685 303 aa14.84□□□□□ -0.03
CPSF4-209ENST00000465132 LSM2Q9Y333 95 aaKnown RBP14.84□□□□□ -0.03
CPSF4-209ENST00000465132 MAGEA13PA6NCF6 341 aa14.83□□□□□ -0.04
CPSF4-209ENST00000465132 GATBO75879 557 aaKnown RBP14.83□□□□□ -0.04
CPSF4-209ENST00000465132 ZFPL1O95159 310 aa14.83□□□□□ -0.04
CPSF4-209ENST00000465132 CST4P01036 141 aa14.83□□□□□ -0.04
CPSF4-209ENST00000465132 ADH4P08319 380 aa14.83□□□□□ -0.04
CPSF4-209ENST00000465132 ZNF20P17024 532 aa14.83□□□□□ -0.04
CPSF4-209ENST00000465132 CELP19835 753 aa14.83□□□□□ -0.04
CPSF4-209ENST00000465132 NR4A2P43354 598 aa14.83□□□□□ -0.04
CPSF4-209ENST00000465132 KIR3DL2P43630 455 aa14.83□□□□□ -0.04
CPSF4-209ENST00000465132 NANOS3P60323 173 aaKnown RBP14.83□□□□□ -0.04
CPSF4-209ENST00000465132 UBE2UQ5VVX9 321 aa14.83□□□□□ -0.04
CPSF4-209ENST00000465132 DMKNQ6E0U4 476 aaPredicted RBP14.83□□□□□ -0.04
CPSF4-209ENST00000465132 OR56B2PQ8NGI1 322 aa14.83□□□□□ -0.04
CPSF4-209ENST00000465132 TSEN15Q8WW01 171 aaKnown RBP14.83□□□□□ -0.04
CPSF4-209ENST00000465132 NEU4Q8WWR8 484 aaPredicted RBP14.83□□□□□ -0.04
CPSF4-209ENST00000465132 VRK1Q99986 396 aaPredicted RBP14.83□□□□□ -0.04
CPSF4-209ENST00000465132 PIMREGQ9BSJ6 248 aa14.83□□□□□ -0.04
CPSF4-209ENST00000465132 C14orf119Q9NWQ9 140 aa14.83□□□□□ -0.04
CPSF4-209ENST00000465132 ZNF319Q9P2F9 582 aa14.83□□□□□ -0.04
CPSF4-209ENST00000465132 DHDHQ9UQ10 334 aa14.83□□□□□ -0.04
CPSF4-209ENST00000465132 PIGLQ9Y2B2 252 aa14.83□□□□□ -0.04
CPSF4-209ENST00000465132 LOC100289279A0A1B0GTE1 492 aa14.82□□□□□ -0.04
CPSF4-209ENST00000465132 C17orf100A8MU93 164 aa14.82□□□□□ -0.04
CPSF4-209ENST00000465132 E9PI62 339 aa14.82□□□□□ -0.04
CPSF4-209ENST00000465132 ADRA2AP08913 450 aa14.82□□□□□ -0.04
CPSF4-209ENST00000465132 SRD5A1P18405 259 aa14.82□□□□□ -0.04
CPSF4-209ENST00000465132 TNFRSF1AP19438 455 aa14.82□□□□□ -0.04
CPSF4-209ENST00000465132 SRP9P49458 86 aaKnown RBP14.82□□□□□ -0.04
CPSF4-209ENST00000465132 MMP15P51511 669 aa14.82□□□□□ -0.04
CPSF4-209ENST00000465132 GTF2A1P52655 376 aaPredicted RBP14.82□□□□□ -0.04
CPSF4-209ENST00000465132 SLC3A1Q07837 685 aa14.82□□□□□ -0.04
CPSF4-209ENST00000465132 TPBGQ13641 420 aa14.82□□□□□ -0.04
CPSF4-209ENST00000465132 OR8G1Q15617 311 aa14.82□□□□□ -0.04
CPSF4-209ENST00000465132 ODF4Q2M2E3 257 aa14.82□□□□□ -0.04
CPSF4-209ENST00000465132 FAM166AQ6J272 317 aa14.82□□□□□ -0.04
CPSF4-209ENST00000465132 Q6ZSR3 168 aa14.82□□□□□ -0.04
CPSF4-209ENST00000465132 LRP11Q86VZ4 500 aa14.82□□□□□ -0.04
CPSF4-209ENST00000465132 BHLHE23Q8NDY6 225 aa14.82□□□□□ -0.04
CPSF4-209ENST00000465132 OR5D14Q8NGL3 314 aa14.82□□□□□ -0.04
CPSF4-209ENST00000465132 OR13C3Q8NGS6 347 aa14.82□□□□□ -0.04
CPSF4-209ENST00000465132 OR8S1Q8NH09 359 aa14.82□□□□□ -0.04
CPSF4-209ENST00000465132 RPS4Y2Q8TD47 263 aa14.82□□□□□ -0.04
CPSF4-209ENST00000465132 SGCDQ92629 289 aa14.82□□□□□ -0.04
CPSF4-209ENST00000465132 GHSRQ92847 366 aa14.82□□□□□ -0.04
CPSF4-209ENST00000465132 MSI2Q96DH6 328 aaKnown RBP14.82□□□□□ -0.04
CPSF4-209ENST00000465132 SLC30A2Q9BRI3 323 aa14.82□□□□□ -0.04
CPSF4-209ENST00000465132 PAPOLGQ9BWT3 736 aaKnown RBP14.82□□□□□ -0.04
CPSF4-209ENST00000465132 POFUT1Q9H488 388 aa14.82□□□□□ -0.04
CPSF4-209ENST00000465132 DECR2Q9NUI1 292 aa14.82□□□□□ -0.04
CPSF4-209ENST00000465132 CKLFQ9UBR5 152 aa14.82□□□□□ -0.04
CPSF4-209ENST00000465132 KCNS2Q9ULS6 477 aa14.82□□□□□ -0.04
CPSF4-209ENST00000465132 V9GYS6 101 aa14.82□□□□□ -0.04
CPSF4-209ENST00000465132 IGHV4-61A0A0C4DH41 118 aa14.81□□□□□ -0.04
CPSF4-209ENST00000465132 A0A1B0GTI1 187 aa14.81□□□□□ -0.04
CPSF4-209ENST00000465132 TPD52L2O43399 206 aaKnown RBP14.81□□□□□ -0.04
CPSF4-209ENST00000465132 OCM2P0CE71 109 aa14.81□□□□□ -0.04
CPSF4-209ENST00000465132 OCMP0CE72 109 aaPredicted RBP14.81□□□□□ -0.04
CPSF4-209ENST00000465132 CPEP16870 476 aa14.81□□□□□ -0.04
CPSF4-209ENST00000465132 MAP2K4P45985 399 aa14.81□□□□□ -0.04
CPSF4-209ENST00000465132 CLVS2Q5SYC1 327 aa14.81□□□□□ -0.04
CPSF4-209ENST00000465132 FAM120AOSQ5T036 256 aa14.81□□□□□ -0.04
CPSF4-209ENST00000465132 KRT74Q7RTS7 529 aa14.81□□□□□ -0.04
CPSF4-209ENST00000465132 OR5AS1Q8N127 324 aa14.81□□□□□ -0.04
CPSF4-209ENST00000465132 CELF2-AS1Q8N7Q2 184 aa14.81□□□□□ -0.04
CPSF4-209ENST00000465132 CPNE2Q96FN4 548 aaPredicted RBP14.81□□□□□ -0.04
CPSF4-209ENST00000465132 LYZL4Q96KX0 146 aa14.81□□□□□ -0.04
CPSF4-209ENST00000465132 OR5M11Q96RB7 305 aa14.81□□□□□ -0.04
CPSF4-209ENST00000465132 MICU1Q9BPX6 476 aa14.81□□□□□ -0.04
CPSF4-209ENST00000465132 CHODLQ9H9P2 273 aa14.81□□□□□ -0.04
CPSF4-209ENST00000465132 MYOZ1Q9NP98 299 aaPredicted RBP14.81□□□□□ -0.04
CPSF4-209ENST00000465132 ARFGEF3Q5TH69 2177 aa14.81□□□□□ -0.04
CPSF4-209ENST00000465132 IFNL4K9M1U5 179 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms