RNA–Protein interactions for RNA: ENST00000462289.1

VPS36-202, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-202ENST00000462289 IMPAD1Q9NX62 359 aa4.85□□□□□ -1.63
VPS36-202ENST00000462289 CNOT2Q9NZN8 540 aaKnown RBP4.85□□□□□ -1.63
VPS36-202ENST00000462289 MRPL15Q9P015 296 aaKnown RBP4.85□□□□□ -1.63
VPS36-202ENST00000462289 EIF3KQ9UBQ5 218 aaKnown RBP4.85□□□□□ -1.63
VPS36-202ENST00000462289 POU2F3Q9UKI9 436 aa4.85□□□□□ -1.63
VPS36-202ENST00000462289 ZDHHC8Q9ULC8 765 aa4.85□□□□□ -1.63
VPS36-202ENST00000462289 POLR1DQ9Y2S0 133 aa4.85□□□□□ -1.63
VPS36-202ENST00000462289 PCDHGB1Q9Y5G3 927 aa4.85□□□□□ -1.63
VPS36-202ENST00000462289 C2CD3Q4AC94 2353 aa4.84□□□□□ -1.63
VPS36-202ENST00000462289 ARHGAP32A7KAX9 2087 aa4.84□□□□□ -1.63
VPS36-202ENST00000462289 CD300LBA8K4G0 201 aa4.84□□□□□ -1.63
VPS36-202ENST00000462289 VSTM5A8MXK1 200 aa4.84□□□□□ -1.63
VPS36-202ENST00000462289 CLIC3O95833 236 aa4.84□□□□□ -1.63
VPS36-202ENST00000462289 IGHV1-46P01743 117 aa4.84□□□□□ -1.63
VPS36-202ENST00000462289 ISG15P05161 165 aa4.84□□□□□ -1.63
VPS36-202ENST00000462289 CCDC159P0C7I6 412 aa4.84□□□□□ -1.63
VPS36-202ENST00000462289 CFL1P23528 166 aaKnown RBP4.84□□□□□ -1.63
VPS36-202ENST00000462289 ACKR3P25106 362 aa4.84□□□□□ -1.63
VPS36-202ENST00000462289 DCKP27707 260 aa4.84□□□□□ -1.63
VPS36-202ENST00000462289 CDKN1AP38936 164 aa4.84□□□□□ -1.63
VPS36-202ENST00000462289 CD200P41217 278 aa4.84□□□□□ -1.63
VPS36-202ENST00000462289 CRYBB2P43320 205 aa4.84□□□□□ -1.63
VPS36-202ENST00000462289 TGM4P49221 684 aa4.84□□□□□ -1.63
VPS36-202ENST00000462289 CX3CR1P49238 355 aa4.84□□□□□ -1.63
VPS36-202ENST00000462289 CCR9P51686 369 aa4.84□□□□□ -1.63
VPS36-202ENST00000462289 ART1P52961 327 aa4.84□□□□□ -1.63
VPS36-202ENST00000462289 ATP5J2P56134 94 aa4.84□□□□□ -1.63
VPS36-202ENST00000462289 DSCR9P59020 149 aa4.84□□□□□ -1.63
VPS36-202ENST00000462289 SLC35A2P78381 396 aa4.84□□□□□ -1.63
VPS36-202ENST00000462289 LOXL1Q08397 574 aaPredicted RBP4.84□□□□□ -1.63
VPS36-202ENST00000462289 MFGE8Q08431 387 aaPredicted RBP4.84□□□□□ -1.63
VPS36-202ENST00000462289 GALEQ14376 348 aa4.84□□□□□ -1.63
VPS36-202ENST00000462289 IRF3Q14653 427 aa4.84□□□□□ -1.63
VPS36-202ENST00000462289 HLXQ14774 488 aaPredicted RBP4.84□□□□□ -1.63
VPS36-202ENST00000462289 LRRC36Q1X8D7 754 aa4.84□□□□□ -1.63
VPS36-202ENST00000462289 SPRNQ5BIV9 151 aa4.84□□□□□ -1.63
VPS36-202ENST00000462289 Q5PR19 223 aa4.84□□□□□ -1.63
VPS36-202ENST00000462289 GLYATL3Q5SZD4 288 aa4.84□□□□□ -1.63
VPS36-202ENST00000462289 LIPNQ5VXI9 398 aa4.84□□□□□ -1.63
VPS36-202ENST00000462289 ZNF529Q6P280 563 aa4.84□□□□□ -1.63
VPS36-202ENST00000462289 LRRN1Q6UXK5 716 aa4.84□□□□□ -1.63
VPS36-202ENST00000462289 CATSPERDQ86XM0 798 aa4.84□□□□□ -1.63
VPS36-202ENST00000462289 ELMOD2Q8IZ81 293 aa4.84□□□□□ -1.63
VPS36-202ENST00000462289 GALNT4Q8N4A0 578 aa4.84□□□□□ -1.63
VPS36-202ENST00000462289 ACBD7Q8N6N7 88 aa4.84□□□□□ -1.63
VPS36-202ENST00000462289 ZNF283Q8N7M2 679 aa4.84□□□□□ -1.63
VPS36-202ENST00000462289 SETD9Q8NE22 299 aa4.84□□□□□ -1.63
VPS36-202ENST00000462289 OR8G5Q8NG78 346 aa4.84□□□□□ -1.63
VPS36-202ENST00000462289 OR8B12Q8NGG6 310 aa4.84□□□□□ -1.63
VPS36-202ENST00000462289 OR51G2Q8NGK0 314 aa4.84□□□□□ -1.63
VPS36-202ENST00000462289 OR52I1Q8NGK6 324 aa4.84□□□□□ -1.63
VPS36-202ENST00000462289 HAVCR2Q8TDQ0 301 aa4.84□□□□□ -1.63
VPS36-202ENST00000462289 CYGBQ8WWM9 190 aa4.84□□□□□ -1.63
VPS36-202ENST00000462289 GTF3AQ92664 365 aaKnown RBP4.84□□□□□ -1.63
VPS36-202ENST00000462289 RORBQ92753 470 aa4.84□□□□□ -1.63
VPS36-202ENST00000462289 CMBLQ96DG6 245 aa4.84□□□□□ -1.63
VPS36-202ENST00000462289 RNFT2Q96EX2 444 aa4.84□□□□□ -1.63
VPS36-202ENST00000462289 PELI1Q96FA3 418 aa4.84□□□□□ -1.63
VPS36-202ENST00000462289 TRMT61AQ96FX7 289 aaKnown RBP4.84□□□□□ -1.63
VPS36-202ENST00000462289 Q96MT0 163 aa4.84□□□□□ -1.63
VPS36-202ENST00000462289 COPS4Q9BT78 406 aa4.84□□□□□ -1.63
VPS36-202ENST00000462289 SOX7Q9BT81 388 aa4.84□□□□□ -1.63
VPS36-202ENST00000462289 MROQ9BYG7 248 aa4.84□□□□□ -1.63
VPS36-202ENST00000462289 DUSP21Q9H596 190 aa4.84□□□□□ -1.63
VPS36-202ENST00000462289 SP140LQ9H930 580 aa4.84□□□□□ -1.63
VPS36-202ENST00000462289 AASSQ9UDR5 926 aa4.84□□□□□ -1.63
VPS36-202ENST00000462289 PSORS1C1Q9UIG5 152 aa4.84□□□□□ -1.63
VPS36-202ENST00000462289 LAMP5Q9UJQ1 280 aa4.84□□□□□ -1.63
VPS36-202ENST00000462289 DIMT1Q9UNQ2 313 aaKnown RBP4.84□□□□□ -1.63
VPS36-202ENST00000462289 RRP15Q9Y3B9 282 aaKnown RBP4.84□□□□□ -1.63
VPS36-202ENST00000462289 GRIP1Q9Y3R0 1128 aa4.84□□□□□ -1.63
VPS36-202ENST00000462289 RPL36Q9Y3U8 105 aaKnown RBP4.84□□□□□ -1.63
VPS36-202ENST00000462289 R4GMQ9 66 aa4.84□□□□□ -1.63
VPS36-202ENST00000462289 METTL15A6NJ78 407 aa4.83□□□□□ -1.64
VPS36-202ENST00000462289 SNTNA6NMZ2 147 aa4.83□□□□□ -1.64
VPS36-202ENST00000462289 OR4C45A6NMZ5 311 aa4.83□□□□□ -1.64
VPS36-202ENST00000462289 ZNF670-ZNF695F2Z2N8 137 aa4.83□□□□□ -1.64
VPS36-202ENST00000462289 F5H5K5 113 aa4.83□□□□□ -1.64
VPS36-202ENST00000462289 TNFRSF13BO14836 293 aaPredicted RBP4.83□□□□□ -1.64
VPS36-202ENST00000462289 DENRO43583 198 aaKnown RBP4.83□□□□□ -1.64
VPS36-202ENST00000462289 FADS2O95864 444 aaKnown RBP4.83□□□□□ -1.64
VPS36-202ENST00000462289 CST4P01036 141 aa4.83□□□□□ -1.64
VPS36-202ENST00000462289 LCATP04180 440 aa4.83□□□□□ -1.64
VPS36-202ENST00000462289 CD1AP06126 327 aa4.83□□□□□ -1.64
VPS36-202ENST00000462289 LCKP06239 509 aa4.83□□□□□ -1.64
VPS36-202ENST00000462289 MRPL3P09001 348 aaKnown RBP4.83□□□□□ -1.64
VPS36-202ENST00000462289 H2BFMP0C1H6 154 aa4.83□□□□□ -1.64
VPS36-202ENST00000462289 SELEP16581 610 aa4.83□□□□□ -1.64
VPS36-202ENST00000462289 ACHEP22303 614 aa4.83□□□□□ -1.64
VPS36-202ENST00000462289 ALDH3B1P43353 468 aa4.83□□□□□ -1.64
VPS36-202ENST00000462289 KIR3DL2P43630 455 aa4.83□□□□□ -1.64
VPS36-202ENST00000462289 HSPA13P48723 471 aa4.83□□□□□ -1.64
VPS36-202ENST00000462289 ZNF81P51508 661 aa4.83□□□□□ -1.64
VPS36-202ENST00000462289 PRKXP51817 358 aa4.83□□□□□ -1.64
VPS36-202ENST00000462289 RIDAP52758 137 aaKnown RBP4.83□□□□□ -1.64
VPS36-202ENST00000462289 RPS7P62081 194 aaKnown RBP4.83□□□□□ -1.64
VPS36-202ENST00000462289 CSNK2BP67870 215 aa4.83□□□□□ -1.64
VPS36-202ENST00000462289 ACSM1Q08AH1 577 aa4.83□□□□□ -1.64
VPS36-202ENST00000462289 MRPL28Q13084 256 aaKnown RBP4.83□□□□□ -1.64
VPS36-202ENST00000462289 MAB21L1Q13394 359 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms