RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 ZNF32P17041 273 aa1.97□□□□□ -2.09
VCL-203ENST00000461383 CXCL12P48061 93 aa1.97□□□□□ -2.09
VCL-203ENST00000461383 UBE2E1P51965 193 aa1.97□□□□□ -2.09
VCL-203ENST00000461383 MTPNP58546 118 aa1.97□□□□□ -2.09
VCL-203ENST00000461383 RPL31P62899 125 aaKnown RBP1.97□□□□□ -2.09
VCL-203ENST00000461383 XIAPP98170 497 aa1.97□□□□□ -2.09
VCL-203ENST00000461383 PITPNAQ00169 270 aa1.97□□□□□ -2.09
VCL-203ENST00000461383 SIGLEC14Q08ET2 396 aa1.97□□□□□ -2.09
VCL-203ENST00000461383 IFFO1Q0D2I5 559 aa1.97□□□□□ -2.09
VCL-203ENST00000461383 EBI3Q14213 229 aa1.97□□□□□ -2.09
VCL-203ENST00000461383 Q3ZCU0 254 aa1.97□□□□□ -2.09
VCL-203ENST00000461383 MFSD14CQ5VZR4 134 aa1.97□□□□□ -2.09
VCL-203ENST00000461383 GUSBP11Q6P575 273 aa1.97□□□□□ -2.09
VCL-203ENST00000461383 SLC7A5P1Q8MH63 180 aa1.97□□□□□ -2.09
VCL-203ENST00000461383 ZNF645Q8N7E2 425 aa1.97□□□□□ -2.09
VCL-203ENST00000461383 OR6N2Q8NGY6 317 aa1.97□□□□□ -2.09
VCL-203ENST00000461383 ZNF461Q8TAF7 563 aa1.97□□□□□ -2.09
VCL-203ENST00000461383 LINC01560Q8TB33 94 aa1.97□□□□□ -2.09
VCL-203ENST00000461383 KCNS1Q96KK3 526 aa1.97□□□□□ -2.09
VCL-203ENST00000461383 UBE2E2Q96LR5 201 aa1.97□□□□□ -2.09
VCL-203ENST00000461383 DOK1Q99704 481 aa1.97□□□□□ -2.09
VCL-203ENST00000461383 GABRG3Q99928 467 aa1.97□□□□□ -2.09
VCL-203ENST00000461383 RHOXF2Q9BQY4 288 aa1.97□□□□□ -2.09
VCL-203ENST00000461383 HINT2Q9BX68 163 aa1.97□□□□□ -2.09
VCL-203ENST00000461383 MAP1LC3CQ9BXW4 147 aa1.97□□□□□ -2.09
VCL-203ENST00000461383 BEX2Q9BXY8 128 aa1.97□□□□□ -2.09
VCL-203ENST00000461383 ARV1Q9H2C2 271 aa1.97□□□□□ -2.09
VCL-203ENST00000461383 EXOSC4Q9NPD3 245 aaKnown RBP1.97□□□□□ -2.09
VCL-203ENST00000461383 SIRT7Q9NRC8 400 aa1.97□□□□□ -2.09
VCL-203ENST00000461383 TMEM100Q9NV29 134 aa1.97□□□□□ -2.09
VCL-203ENST00000461383 PRO0461Q9UI25 63 aa1.97□□□□□ -2.09
VCL-203ENST00000461383 ZNF257Q9Y2Q1 563 aa1.97□□□□□ -2.09
VCL-203ENST00000461383 KLF12Q9Y4X4 402 aa1.97□□□□□ -2.09
VCL-203ENST00000461383 TRAV8-7A0A075B6U6 113 aa1.96□□□□□ -2.1
VCL-203ENST00000461383 A0A0A6YYD5 115 aa1.96□□□□□ -2.1
VCL-203ENST00000461383 IGHV7-4-1A0A0J9YVY3 117 aa1.96□□□□□ -2.1
VCL-203ENST00000461383 ERICH4A6NGS2 130 aa1.96□□□□□ -2.1
VCL-203ENST00000461383 LINC01619G3V211 115 aa1.96□□□□□ -2.1
VCL-203ENST00000461383 SOCS1O15524 211 aa1.96□□□□□ -2.1
VCL-203ENST00000461383 ENSAO43768 121 aaKnown RBP1.96□□□□□ -2.1
VCL-203ENST00000461383 GMDSO60547 372 aa1.96□□□□□ -2.1
VCL-203ENST00000461383 ALOX12BO75342 701 aa1.96□□□□□ -2.1
VCL-203ENST00000461383 TRBV12-3P01733 135 aa1.96□□□□□ -2.1
VCL-203ENST00000461383 IVLP07476 585 aa1.96□□□□□ -2.1
VCL-203ENST00000461383 LINC00869P0C866 280 aa1.96□□□□□ -2.1
VCL-203ENST00000461383 POLR2IP36954 125 aaKnown RBP1.96□□□□□ -2.1
VCL-203ENST00000461383 PSMB2P49721 201 aa1.96□□□□□ -2.1
VCL-203ENST00000461383 INCA1Q0VD86 236 aa1.96□□□□□ -2.1
VCL-203ENST00000461383 LAMTOR4Q0VGL1 99 aa1.96□□□□□ -2.1
VCL-203ENST00000461383 DMC1Q14565 340 aa1.96□□□□□ -2.1
VCL-203ENST00000461383 VAMP3Q15836 100 aa1.96□□□□□ -2.1
VCL-203ENST00000461383 TAL2Q16559 108 aa1.96□□□□□ -2.1
VCL-203ENST00000461383 COX19Q49B96 90 aa1.96□□□□□ -2.1
VCL-203ENST00000461383 C6orf99Q4VX62 202 aa1.96□□□□□ -2.1
VCL-203ENST00000461383 ABCA11PQ4W5N1 156 aa1.96□□□□□ -2.1
VCL-203ENST00000461383 C5orf47Q569G3 176 aa1.96□□□□□ -2.1
VCL-203ENST00000461383 STEAP4Q687X5 459 aa1.96□□□□□ -2.1
VCL-203ENST00000461383 C16orf87Q6PH81 154 aa1.96□□□□□ -2.1
VCL-203ENST00000461383 ZNF695Q8IW36 515 aa1.96□□□□□ -2.1
VCL-203ENST00000461383 ST13P4Q8IZP2 240 aaPredicted RBP1.96□□□□□ -2.1
VCL-203ENST00000461383 DAW1Q8N136 415 aa1.96□□□□□ -2.1
VCL-203ENST00000461383 OR4M2Q8NGB6 313 aa1.96□□□□□ -2.1
VCL-203ENST00000461383 OR13G1Q8NGZ3 307 aa1.96□□□□□ -2.1
VCL-203ENST00000461383 OR8K3Q8NH51 312 aa1.96□□□□□ -2.1
VCL-203ENST00000461383 ENKURQ8TC29 256 aa1.96□□□□□ -2.1
VCL-203ENST00000461383 NEURL3Q96EH8 262 aa1.96□□□□□ -2.1
VCL-203ENST00000461383 OR10C1Q96KK4 312 aa1.96□□□□□ -2.1
VCL-203ENST00000461383 ALS2CR12Q96Q35 445 aa1.96□□□□□ -2.1
VCL-203ENST00000461383 OR4K3Q96R72 315 aa1.96□□□□□ -2.1
VCL-203ENST00000461383 COPS4Q9BT78 406 aa1.96□□□□□ -2.1
VCL-203ENST00000461383 NUDT9Q9BW91 350 aa1.96□□□□□ -2.1
VCL-203ENST00000461383 SAMD10Q9BYL1 202 aa1.96□□□□□ -2.1
VCL-203ENST00000461383 C8orf17Q9NRJ1 99 aa1.96□□□□□ -2.1
VCL-203ENST00000461383 CYTL1Q9NRR1 136 aa1.96□□□□□ -2.1
VCL-203ENST00000461383 HEBP1Q9NRV9 189 aa1.96□□□□□ -2.1
VCL-203ENST00000461383 RBFOX1Q9NWB1 397 aaKnown RBP1.96□□□□□ -2.1
VCL-203ENST00000461383 FARSAQ9Y285 508 aaKnown RBP1.96□□□□□ -2.1
VCL-203ENST00000461383 SIGLEC7Q9Y286 467 aa1.96□□□□□ -2.1
VCL-203ENST00000461383 SIGLEC9Q9Y336 463 aa1.96□□□□□ -2.1
VCL-203ENST00000461383 LRRC42Q9Y546 428 aa1.96□□□□□ -2.1
VCL-203ENST00000461383 RFNGQ9Y644 331 aa1.96□□□□□ -2.1
VCL-203ENST00000461383 SVILO95425 2214 aa1.96□□□□□ -2.1
VCL-203ENST00000461383 IGKV1-27A0A075B6S5 117 aa1.95□□□□□ -2.1
VCL-203ENST00000461383 IGHV3-49A0A0A0MS15 119 aa1.95□□□□□ -2.1
VCL-203ENST00000461383 CENPVL3A0A0U1RRI6 287 aa1.95□□□□□ -2.1
VCL-203ENST00000461383 FAM240AA0A1B0GVK7 77 aa1.95□□□□□ -2.1
VCL-203ENST00000461383 TVP23AA6NH52 213 aa1.95□□□□□ -2.1
VCL-203ENST00000461383 CENPBD1B2RD01 187 aa1.95□□□□□ -2.1
VCL-203ENST00000461383 ZNF879B4DU55 563 aa1.95□□□□□ -2.1
VCL-203ENST00000461383 PSPHP1O15172 72 aa1.95□□□□□ -2.1
VCL-203ENST00000461383 GATCO43716 136 aaKnown RBP1.95□□□□□ -2.1
VCL-203ENST00000461383 SCO1O75880 301 aa1.95□□□□□ -2.1
VCL-203ENST00000461383 CCNKO75909 580 aa1.95□□□□□ -2.1
VCL-203ENST00000461383 CCNE2O96020 404 aa1.95□□□□□ -2.1
VCL-203ENST00000461383 MMP7P09237 267 aaPredicted RBP1.95□□□□□ -2.1
VCL-203ENST00000461383 OR5AL1P0C617 328 aa1.95□□□□□ -2.1
VCL-203ENST00000461383 MUC1P15941 1255 aaPredicted RBP1.95□□□□□ -2.1
VCL-203ENST00000461383 CXCR1P25024 350 aa1.95□□□□□ -2.1
VCL-203ENST00000461383 LOXP28300 417 aaPredicted RBP1.95□□□□□ -2.1
VCL-203ENST00000461383 GNRHRP30968 328 aa1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms