RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 GREM1O60565 184 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 PIAS2O75928 621 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 HPRT1P00492 218 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 POMCP01189 267 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 HLA-DQA1P01909 254 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 TRGC2P03986 189 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 CTSDP07339 412 aaPredicted RBP1.99□□□□□ -2.09
USP53-202ENST00000450251 UMODP07911 640 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 FURINP09958 794 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 DANCRP0C864 163 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 BCL2P10415 239 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 MGST1P10620 155 aaKnown RBP1.99□□□□□ -2.09
USP53-202ENST00000450251 EN2P19622 333 aaPredicted RBP1.99□□□□□ -2.09
USP53-202ENST00000450251 EPHA8P29322 1005 aaPredicted RBP1.99□□□□□ -2.09
USP53-202ENST00000450251 GABRA3P34903 492 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 CEACAM6P40199 344 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 OR1D4P47884 311 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 EFNA3P52797 238 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 PGGT1BP53609 377 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 CLRN1P58418 232 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 PAX2Q02962 417 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 NSDHLQ15738 373 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 TMEM249Q2WGJ8 235 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 SLC22A6Q4U2R8 563 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 PLA2G2CQ5R387 149 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 PIP5KL1Q5T9C9 394 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 Q6ZPB1 254 aaPredicted RBP1.99□□□□□ -2.09
USP53-202ENST00000450251 TPRG1Q6ZUI0 275 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 GPRIN1Q7Z2K8 1008 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 C16orf82Q7Z2V1 217 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 TMEM251Q8N6I4 163 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 OR1L6Q8NGR2 347 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 BLNKQ8WV28 456 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 ESAMQ96AP7 390 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 MYEOVQ96EZ4 313 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 SOSTQ9BQB4 213 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 RAB33BQ9H082 229 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 SPATC1LQ9H0A9 340 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 MSL2Q9HCI7 577 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 GPR84Q9NQS5 396 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 PLSCR2Q9NRY7 297 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 SLC25A37Q9NYZ2 338 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 OR5V1Q9UGF6 321 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 FZD1Q9UP38 647 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 VDAC3Q9Y277 283 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 NTNG1Q9Y2I2 539 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 MRPS2Q9Y399 296 aaKnown RBP1.99□□□□□ -2.09
USP53-202ENST00000450251 OR1A2Q9Y585 309 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 PCDHGC4Q9Y5F7 938 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 ZFP37Q9Y6Q3 630 aaPredicted RBP1.99□□□□□ -2.09
USP53-202ENST00000450251 SMIM35A0A1B0GVV1 85 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 A0A1W2PQH9 124 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 A6NCN8 305 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 GRXCR1A8MXD5 290 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 FCN1O00602 326 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 HSD17B6O14756 317 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 CHEK1O14757 476 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 EFSO43281 561 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 CDC14BO60729 498 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 ZNF737O75373 536 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 CTAG2O75638 210 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 NXPH2O95156 264 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 VAMP5O95183 116 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 C1QAP02745 245 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 OR5AL1P0C617 328 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 ZNF28P17035 718 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 TAL1P17542 331 aaPredicted RBP1.99□□□□□ -2.09
USP53-202ENST00000450251 IDSP22304 550 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 AKR1C3P42330 323 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 AMTP48728 403 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 SLC25A1P53007 311 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 SOX10P56693 466 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 RPS15AP62244 130 aaKnown RBP1.99□□□□□ -2.09
USP53-202ENST00000450251 GUCA2AQ02747 115 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 MELKQ14680 651 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 PMVKQ15126 192 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 OR8B8Q15620 311 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 PSG3Q16557 428 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 PLCXD3Q63HM9 321 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 DMKNQ6E0U4 476 aaPredicted RBP1.99□□□□□ -2.09
USP53-202ENST00000450251 PARM1Q6UWI2 310 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 CLEC10AQ8IUN9 316 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 AGBL5Q8NDL9 886 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 BHLHE23Q8NDY6 225 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 OR11H4Q8NGC9 324 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 KCNE4Q8WWG9 221 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 LHX4Q969G2 390 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 SPTSSAQ969W0 71 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 ISOC2Q96AB3 205 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 ARRDC3Q96B67 414 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 ZNF689Q96CS4 500 aaPredicted RBP1.99□□□□□ -2.09
USP53-202ENST00000450251 ZG16BQ96DA0 208 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 MARS2Q96GW9 593 aaKnown RBP1.99□□□□□ -2.09
USP53-202ENST00000450251 ZNF668Q96K58 619 aaPredicted RBP1.99□□□□□ -2.09
USP53-202ENST00000450251 KCNS1Q96KK3 526 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 GINS3Q9BRX5 216 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 RBKSQ9H477 322 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 FBRSQ9HAH7 460 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 CA10Q9NS85 328 aa1.99□□□□□ -2.09
USP53-202ENST00000450251 LIN7CQ9NUP9 197 aaKnown RBP1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms