RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 RPLP2P05387 115 aaKnown RBP7.65□□□□□ -1.18
LSM5-208ENST00000450169 FOSL2P15408 326 aa7.65□□□□□ -1.18
LSM5-208ENST00000450169 CSF2RAP15509 400 aa7.65□□□□□ -1.18
LSM5-208ENST00000450169 SELEP16581 610 aa7.65□□□□□ -1.18
LSM5-208ENST00000450169 RAP1BP61224 184 aa7.65□□□□□ -1.18
LSM5-208ENST00000450169 BTG2P78543 158 aa7.65□□□□□ -1.18
LSM5-208ENST00000450169 CCL20P78556 96 aa7.65□□□□□ -1.18
LSM5-208ENST00000450169 COL10A1Q03692 680 aa7.65□□□□□ -1.18
LSM5-208ENST00000450169 PMS2P11Q13670 270 aa7.65□□□□□ -1.18
LSM5-208ENST00000450169 FAM78AQ5JUQ0 283 aa7.65□□□□□ -1.18
LSM5-208ENST00000450169 DEGS2Q6QHC5 323 aa7.65□□□□□ -1.18
LSM5-208ENST00000450169 TMEM182Q6ZP80 229 aaPredicted RBP7.65□□□□□ -1.18
LSM5-208ENST00000450169 SSX7Q7RTT5 188 aa7.65□□□□□ -1.18
LSM5-208ENST00000450169 DTWD2Q8NBA8 298 aa7.65□□□□□ -1.18
LSM5-208ENST00000450169 OR6N2Q8NGY6 317 aa7.65□□□□□ -1.18
LSM5-208ENST00000450169 EXTL1Q92935 676 aa7.65□□□□□ -1.18
LSM5-208ENST00000450169 PTX4Q96A99 478 aa7.65□□□□□ -1.18
LSM5-208ENST00000450169 TMEM18Q96B42 140 aa7.65□□□□□ -1.18
LSM5-208ENST00000450169 ZNF681Q96N22 645 aa7.65□□□□□ -1.18
LSM5-208ENST00000450169 TM7SF3Q9NS93 570 aa7.65□□□□□ -1.18
LSM5-208ENST00000450169 TMEM242Q9NWH2 141 aa7.65□□□□□ -1.18
LSM5-208ENST00000450169 CLEC4EQ9ULY5 219 aa7.65□□□□□ -1.18
LSM5-208ENST00000450169 ZFP30Q9Y2G7 519 aa7.65□□□□□ -1.18
LSM5-208ENST00000450169 CEACAM18A8MTB9 384 aa7.64□□□□□ -1.19
LSM5-208ENST00000450169 C4orf51C9J302 202 aa7.64□□□□□ -1.19
LSM5-208ENST00000450169 SCGB1D1O95968 90 aa7.64□□□□□ -1.19
LSM5-208ENST00000450169 MBPP02686 304 aaPredicted RBP7.64□□□□□ -1.19
LSM5-208ENST00000450169 MDKP21741 143 aaPredicted RBP7.64□□□□□ -1.19
LSM5-208ENST00000450169 FPR2P25090 351 aa7.64□□□□□ -1.19
LSM5-208ENST00000450169 CCKARP32238 428 aa7.64□□□□□ -1.19
LSM5-208ENST00000450169 CD70P32970 193 aa7.64□□□□□ -1.19
LSM5-208ENST00000450169 RPS27P42677 84 aaKnown RBP7.64□□□□□ -1.19
LSM5-208ENST00000450169 CDKN2AP42771 156 aaKnown RBP7.64□□□□□ -1.19
LSM5-208ENST00000450169 LBX1P52954 281 aa7.64□□□□□ -1.19
LSM5-208ENST00000450169 HLA-DRB3P79483 266 aa7.64□□□□□ -1.19
LSM5-208ENST00000450169 HSF1Q00613 529 aa7.64□□□□□ -1.19
LSM5-208ENST00000450169 CEBPEQ15744 281 aa7.64□□□□□ -1.19
LSM5-208ENST00000450169 DCST2Q5T1A1 773 aa7.64□□□□□ -1.19
LSM5-208ENST00000450169 RIPPLY2Q5TAB7 128 aa7.64□□□□□ -1.19
LSM5-208ENST00000450169 C1orf189Q5VU69 101 aa7.64□□□□□ -1.19
LSM5-208ENST00000450169 GLB1LQ6UWU2 654 aa7.64□□□□□ -1.19
LSM5-208ENST00000450169 TMEM184AQ6ZMB5 413 aa7.64□□□□□ -1.19
LSM5-208ENST00000450169 C9orf40Q8IXQ3 194 aa7.64□□□□□ -1.19
LSM5-208ENST00000450169 ARL14EPQ8N8R7 260 aaPredicted RBP7.64□□□□□ -1.19
LSM5-208ENST00000450169 NOXO1Q8NFA2 376 aa7.64□□□□□ -1.19
LSM5-208ENST00000450169 DNASE2BQ8WZ79 361 aa7.64□□□□□ -1.19
LSM5-208ENST00000450169 OVCA2Q8WZ82 227 aa7.64□□□□□ -1.19
LSM5-208ENST00000450169 FAM122AQ96E09 287 aa7.64□□□□□ -1.19
LSM5-208ENST00000450169 ABHD17AQ96GS6 310 aa7.64□□□□□ -1.19
LSM5-208ENST00000450169 HIST1H2AAQ96QV6 131 aa7.64□□□□□ -1.19
LSM5-208ENST00000450169 SERINC2Q96SA4 455 aa7.64□□□□□ -1.19
LSM5-208ENST00000450169 MACROD1Q9BQ69 325 aa7.64□□□□□ -1.19
LSM5-208ENST00000450169 WFDC1Q9HC57 220 aa7.64□□□□□ -1.19
LSM5-208ENST00000450169 SRPK3Q9UPE1 567 aa7.64□□□□□ -1.19
LSM5-208ENST00000450169 LSM5Q9Y4Y9 91 aaKnown RBP7.64□□□□□ -1.19
LSM5-208ENST00000450169 LIPGQ9Y5X9 500 aa7.64□□□□□ -1.19
LSM5-208ENST00000450169 WSB1Q9Y6I7 421 aa7.64□□□□□ -1.19
LSM5-208ENST00000450169 THSD7BQ9C0I4 1608 aa7.64□□□□□ -1.19
LSM5-208ENST00000450169 ZNF860A6NHJ4 632 aa7.64□□□□□ -1.19
LSM5-208ENST00000450169 B4E171 279 aa7.64□□□□□ -1.19
LSM5-208ENST00000450169 PPP5D1E7EU14 171 aa7.64□□□□□ -1.19
LSM5-208ENST00000450169 PLRG1O43660 514 aaKnown RBP7.64□□□□□ -1.19
LSM5-208ENST00000450169 SCGNO76038 276 aa7.64□□□□□ -1.19
LSM5-208ENST00000450169 HSPB1P04792 205 aaKnown RBP7.64□□□□□ -1.19
LSM5-208ENST00000450169 GNB3P16520 340 aa7.64□□□□□ -1.19
LSM5-208ENST00000450169 ALOX5APP20292 161 aa7.64□□□□□ -1.19
LSM5-208ENST00000450169 SLC37A1P57057 533 aa7.64□□□□□ -1.19
LSM5-208ENST00000450169 PCK2Q16822 640 aa7.64□□□□□ -1.19
LSM5-208ENST00000450169 LCN10Q6JVE6 187 aa7.64□□□□□ -1.19
LSM5-208ENST00000450169 KIRREL2Q6UWL6 708 aa7.64□□□□□ -1.19
LSM5-208ENST00000450169 DPY19L4Q7Z388 723 aa7.64□□□□□ -1.19
LSM5-208ENST00000450169 TIPARPQ7Z3E1 657 aaKnown RBP7.64□□□□□ -1.19
LSM5-208ENST00000450169 ADPRHL1Q8NDY3 354 aa7.64□□□□□ -1.19
LSM5-208ENST00000450169 FAM46BQ96A09 425 aa7.64□□□□□ -1.19
LSM5-208ENST00000450169 MS4A6EQ96DS6 147 aa7.64□□□□□ -1.19
LSM5-208ENST00000450169 SCGB3A2Q96PL1 93 aa7.64□□□□□ -1.19
LSM5-208ENST00000450169 RTBDNQ9BSG5 229 aaPredicted RBP7.64□□□□□ -1.19
LSM5-208ENST00000450169 ELOVL1Q9BW60 279 aa7.64□□□□□ -1.19
LSM5-208ENST00000450169 PCED1AQ9H1Q7 454 aa7.64□□□□□ -1.19
LSM5-208ENST00000450169 WDR76Q9H967 626 aa7.64□□□□□ -1.19
LSM5-208ENST00000450169 MKKSQ9NPJ1 570 aaPredicted RBP7.64□□□□□ -1.19
LSM5-208ENST00000450169 FBXO34Q9NWN3 711 aa7.64□□□□□ -1.19
LSM5-208ENST00000450169 KIAA1456Q9P272 454 aa7.64□□□□□ -1.19
LSM5-208ENST00000450169 HSPB2A8KAH6 182 aa7.63□□□□□ -1.19
LSM5-208ENST00000450169 PQBP1O60828 265 aaKnown RBP7.63□□□□□ -1.19
LSM5-208ENST00000450169 HPRT1P00492 218 aa7.63□□□□□ -1.19
LSM5-208ENST00000450169 FSTP19883 344 aa7.63□□□□□ -1.19
LSM5-208ENST00000450169 TNFSF10P50591 281 aa7.63□□□□□ -1.19
LSM5-208ENST00000450169 NFATC4Q14934 902 aa7.63□□□□□ -1.19
LSM5-208ENST00000450169 P2RY6Q15077 328 aa7.63□□□□□ -1.19
LSM5-208ENST00000450169 HSPB2Q16082 182 aa7.63□□□□□ -1.19
LSM5-208ENST00000450169 BATFQ16520 125 aa7.63□□□□□ -1.19
LSM5-208ENST00000450169 MAJINQ3KP22 176 aa7.63□□□□□ -1.19
LSM5-208ENST00000450169 NKAIN1Q4KMZ8 207 aa7.63□□□□□ -1.19
LSM5-208ENST00000450169 WIPI1Q5MNZ9 446 aaPredicted RBP7.63□□□□□ -1.19
LSM5-208ENST00000450169 LEMD1Q68G75 181 aa7.63□□□□□ -1.19
LSM5-208ENST00000450169 CLEC2AQ6UVW9 174 aa7.63□□□□□ -1.19
LSM5-208ENST00000450169 Q7L0L9 218 aa7.63□□□□□ -1.19
LSM5-208ENST00000450169 SGPP2Q8IWX5 399 aa7.63□□□□□ -1.19
LSM5-208ENST00000450169 C11orf42Q8N5U0 333 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms