RNA–Protein interactions for RNA: ENST00000447578.6

VPS29-202, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 996 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-202ENST00000447578 CRMP1Q14194 572 aa3.27□□□□□ -1.89
VPS29-202ENST00000447578 PTGES3Q15185 160 aaKnown RBP3.27□□□□□ -1.89
VPS29-202ENST00000447578 CST6Q15828 149 aa3.27□□□□□ -1.89
VPS29-202ENST00000447578 DUSP7Q16829 419 aa3.27□□□□□ -1.89
VPS29-202ENST00000447578 C17orf58Q2M2W7 97 aa3.27□□□□□ -1.89
VPS29-202ENST00000447578 TRIM16LQ309B1 348 aa3.27□□□□□ -1.89
VPS29-202ENST00000447578 TIGITQ495A1 244 aa3.27□□□□□ -1.89
VPS29-202ENST00000447578 VWA2Q5GFL6 755 aa3.27□□□□□ -1.89
VPS29-202ENST00000447578 DMRTC1Q5HYR2 192 aa3.27□□□□□ -1.89
VPS29-202ENST00000447578 UBE2UQ5VVX9 321 aa3.27□□□□□ -1.89
VPS29-202ENST00000447578 MLIPQ5VWP3 458 aa3.27□□□□□ -1.89
VPS29-202ENST00000447578 SAXO2Q658L1 398 aa3.27□□□□□ -1.89
VPS29-202ENST00000447578 PVRIGQ6DKI7 326 aa3.27□□□□□ -1.89
VPS29-202ENST00000447578 REEP3Q6NUK4 255 aa3.27□□□□□ -1.89
VPS29-202ENST00000447578 REG3GQ6UW15 175 aa3.27□□□□□ -1.89
VPS29-202ENST00000447578 UQCC3Q6UW78 93 aa3.27□□□□□ -1.89
VPS29-202ENST00000447578 TMUB2Q71RG4 321 aa3.27□□□□□ -1.89
VPS29-202ENST00000447578 PAGE2Q7Z2X7 111 aa3.27□□□□□ -1.89
VPS29-202ENST00000447578 C6orf120Q7Z4R8 191 aa3.27□□□□□ -1.89
VPS29-202ENST00000447578 PHC2Q8IXK0 858 aa3.27□□□□□ -1.89
VPS29-202ENST00000447578 NATD1Q8N6N6 113 aa3.27□□□□□ -1.89
VPS29-202ENST00000447578 FAM83FQ8NEG4 500 aaPredicted RBP3.27□□□□□ -1.89
VPS29-202ENST00000447578 GPR32P1Q8NGA4 272 aa3.27□□□□□ -1.89
VPS29-202ENST00000447578 OR6Q1Q8NGQ2 317 aa3.27□□□□□ -1.89
VPS29-202ENST00000447578 OR5K2Q8NHB8 316 aa3.27□□□□□ -1.89
VPS29-202ENST00000447578 RHOXF1Q8NHV9 184 aa3.27□□□□□ -1.89
VPS29-202ENST00000447578 MCFD2Q8NI22 146 aa3.27□□□□□ -1.89
VPS29-202ENST00000447578 ZNF675Q8TD23 568 aa3.27□□□□□ -1.89
VPS29-202ENST00000447578 S100ZQ8WXG8 99 aa3.27□□□□□ -1.89
VPS29-202ENST00000447578 ST8SIA1Q92185 356 aa3.27□□□□□ -1.89
VPS29-202ENST00000447578 SLC38A4Q969I6 547 aa3.27□□□□□ -1.89
VPS29-202ENST00000447578 PPP1R14BQ96C90 147 aa3.27□□□□□ -1.89
VPS29-202ENST00000447578 NEURL3Q96EH8 262 aa3.27□□□□□ -1.89
VPS29-202ENST00000447578 ZBED6CLQ96FA7 236 aaPredicted RBP3.27□□□□□ -1.89
VPS29-202ENST00000447578 PDXPQ96GD0 296 aa3.27□□□□□ -1.89
VPS29-202ENST00000447578 TIMD4Q96H15 378 aa3.27□□□□□ -1.89
VPS29-202ENST00000447578 SLC35G5Q96KT7 338 aa3.27□□□□□ -1.89
VPS29-202ENST00000447578 COL21A1Q96P44 957 aa3.27□□□□□ -1.89
VPS29-202ENST00000447578 CITED1Q99966 193 aa3.27□□□□□ -1.89
VPS29-202ENST00000447578 MAPKAP1Q9BPZ7 522 aa3.27□□□□□ -1.89
VPS29-202ENST00000447578 NIPSNAP3BQ9BS92 247 aa3.27□□□□□ -1.89
VPS29-202ENST00000447578 DPH7Q9BTV6 452 aa3.27□□□□□ -1.89
VPS29-202ENST00000447578 FAIM2Q9BWQ8 316 aa3.27□□□□□ -1.89
VPS29-202ENST00000447578 HCAR1Q9BXC0 346 aa3.27□□□□□ -1.89
VPS29-202ENST00000447578 ZNF717Q9BY31 904 aaPredicted RBP3.27□□□□□ -1.89
VPS29-202ENST00000447578 PLA2G2FQ9BZM2 168 aa3.27□□□□□ -1.89
VPS29-202ENST00000447578 UCK2Q9BZX2 261 aa3.27□□□□□ -1.89
VPS29-202ENST00000447578 ROGDIQ9GZN7 287 aa3.27□□□□□ -1.89
VPS29-202ENST00000447578 RHBGQ9H310 441 aa3.27□□□□□ -1.89
VPS29-202ENST00000447578 OR51I1Q9H343 314 aa3.27□□□□□ -1.89
VPS29-202ENST00000447578 NMNAT1Q9HAN9 279 aaPredicted RBP3.27□□□□□ -1.89
VPS29-202ENST00000447578 HMG20AQ9NP66 347 aa3.27□□□□□ -1.89
VPS29-202ENST00000447578 TIGARQ9NQ88 270 aa3.27□□□□□ -1.89
VPS29-202ENST00000447578 ACER3Q9NUN7 267 aa3.27□□□□□ -1.89
VPS29-202ENST00000447578 FKBP14Q9NWM8 211 aa3.27□□□□□ -1.89
VPS29-202ENST00000447578 CLN6Q9NWW5 311 aa3.27□□□□□ -1.89
VPS29-202ENST00000447578 MS4A12Q9NXJ0 267 aa3.27□□□□□ -1.89
VPS29-202ENST00000447578 KLHL28Q9NXS3 571 aa3.27□□□□□ -1.89
VPS29-202ENST00000447578 ENOPH1Q9UHY7 261 aa3.27□□□□□ -1.89
VPS29-202ENST00000447578 ERGIC3Q9Y282 383 aa3.27□□□□□ -1.89
VPS29-202ENST00000447578 CA5BQ9Y2D0 317 aa3.27□□□□□ -1.89
VPS29-202ENST00000447578 PPIAL4EA0A075B759 164 aa3.26□□□□□ -1.89
VPS29-202ENST00000447578 A0A0A6YYD5 115 aa3.26□□□□□ -1.89
VPS29-202ENST00000447578 LOC100506127A0A0U1RQW1 187 aa3.26□□□□□ -1.89
VPS29-202ENST00000447578 FUOMA2VDF0 154 aa3.26□□□□□ -1.89
VPS29-202ENST00000447578 ARRDC5A6NEK1 342 aa3.26□□□□□ -1.89
VPS29-202ENST00000447578 EFCAB10A6NFE3 127 aa3.26□□□□□ -1.89
VPS29-202ENST00000447578 METTL15A6NJ78 407 aa3.26□□□□□ -1.89
VPS29-202ENST00000447578 PDZK1P1A8MUH7 402 aa3.26□□□□□ -1.89
VPS29-202ENST00000447578 E9PLD3 99 aa3.26□□□□□ -1.89
VPS29-202ENST00000447578 G3V3Y1 287 aa3.26□□□□□ -1.89
VPS29-202ENST00000447578 H3BN98 237 aa3.26□□□□□ -1.89
VPS29-202ENST00000447578 BOLA2-SMG1P6H3BVE0 249 aa3.26□□□□□ -1.89
VPS29-202ENST00000447578 HMGN4O00479 90 aa3.26□□□□□ -1.89
VPS29-202ENST00000447578 FAAHO00519 579 aa3.26□□□□□ -1.89
VPS29-202ENST00000447578 FFAR1O14842 300 aa3.26□□□□□ -1.89
VPS29-202ENST00000447578 ZW10O43264 779 aa3.26□□□□□ -1.89
VPS29-202ENST00000447578 ERI3O43414 337 aaKnown RBP3.26□□□□□ -1.89
VPS29-202ENST00000447578 OR10H3O60404 316 aa3.26□□□□□ -1.89
VPS29-202ENST00000447578 MPZL2O60487 215 aa3.26□□□□□ -1.89
VPS29-202ENST00000447578 SERPINB7O75635 380 aa3.26□□□□□ -1.89
VPS29-202ENST00000447578 SULT1C4O75897 302 aa3.26□□□□□ -1.89
VPS29-202ENST00000447578 ATP5LO75964 103 aa3.26□□□□□ -1.89
VPS29-202ENST00000447578 SOX14O95416 240 aa3.26□□□□□ -1.89
VPS29-202ENST00000447578 OXSR1O95747 527 aaPredicted RBP3.26□□□□□ -1.89
VPS29-202ENST00000447578 PTHP01270 115 aa3.26□□□□□ -1.89
VPS29-202ENST00000447578 PPIAL4FP0DN26 164 aa3.26□□□□□ -1.89
VPS29-202ENST00000447578 NTSP30990 170 aa3.26□□□□□ -1.89
VPS29-202ENST00000447578 UGT2B10P36537 528 aa3.26□□□□□ -1.89
VPS29-202ENST00000447578 DUSP3P51452 185 aaPredicted RBP3.26□□□□□ -1.89
VPS29-202ENST00000447578 XKP51811 444 aa3.26□□□□□ -1.89
VPS29-202ENST00000447578 NCBP2P52298 156 aaKnown RBP eCLIP3.26□□□□□ -1.89
VPS29-202ENST00000447578 CRISP1P54107 249 aa3.26□□□□□ -1.89
VPS29-202ENST00000447578 UGT2B15P54855 530 aa3.26□□□□□ -1.89
VPS29-202ENST00000447578 SMIM11AP58511 58 aa3.26□□□□□ -1.89
VPS29-202ENST00000447578 CDC42P60953 191 aa3.26□□□□□ -1.89
VPS29-202ENST00000447578 PRDX1Q06830 199 aaKnown RBP3.26□□□□□ -1.89
VPS29-202ENST00000447578 TGM3Q08188 693 aa3.26□□□□□ -1.89
VPS29-202ENST00000447578 CD300CQ08708 224 aa3.26□□□□□ -1.89
VPS29-202ENST00000447578 ST3GAL4Q11206 333 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms