RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 ACKR3P25106 362 aa11.94□□□□□ -0.5
SSBP3-208ENST00000444533 GATA4P43694 442 aa11.94□□□□□ -0.5
SSBP3-208ENST00000444533 WNT4P56705 351 aa11.94□□□□□ -0.5
SSBP3-208ENST00000444533 OR2G6Q5TZ20 316 aa11.94□□□□□ -0.5
SSBP3-208ENST00000444533 DNM1P46Q6ZS02 220 aa11.94□□□□□ -0.5
SSBP3-208ENST00000444533 MOB3CQ70IA8 216 aa11.94□□□□□ -0.5
SSBP3-208ENST00000444533 MOGAT3Q86VF5 341 aa11.94□□□□□ -0.5
SSBP3-208ENST00000444533 OR13C3Q8NGS6 347 aa11.94□□□□□ -0.5
SSBP3-208ENST00000444533 TSEN15Q8WW01 171 aaKnown RBP11.94□□□□□ -0.5
SSBP3-208ENST00000444533 PP6455Q8WZ26 134 aa11.94□□□□□ -0.5
SSBP3-208ENST00000444533 YIPF5Q969M3 257 aa11.94□□□□□ -0.5
SSBP3-208ENST00000444533 RNF170Q96K19 258 aa11.94□□□□□ -0.5
SSBP3-208ENST00000444533 GCM1Q9NP62 436 aa11.94□□□□□ -0.5
SSBP3-208ENST00000444533 TREM2Q9NZC2 230 aa11.94□□□□□ -0.5
SSBP3-208ENST00000444533 OR5B21A6NL26 309 aa11.93□□□□□ -0.5
SSBP3-208ENST00000444533 CD2P06729 351 aa11.93□□□□□ -0.5
SSBP3-208ENST00000444533 C21orf33P30042 268 aaPredicted RBP11.93□□□□□ -0.5
SSBP3-208ENST00000444533 KIR3DL2P43630 455 aa11.93□□□□□ -0.5
SSBP3-208ENST00000444533 GNG3P63215 75 aa11.93□□□□□ -0.5
SSBP3-208ENST00000444533 RIN1Q13671 783 aa11.93□□□□□ -0.5
SSBP3-208ENST00000444533 KCNJ8Q15842 424 aa11.93□□□□□ -0.5
SSBP3-208ENST00000444533 ZNF181Q2M3W8 571 aa11.93□□□□□ -0.5
SSBP3-208ENST00000444533 CEACAM21Q3KPI0 293 aa11.93□□□□□ -0.5
SSBP3-208ENST00000444533 LAIR2Q6ISS4 152 aa11.93□□□□□ -0.5
SSBP3-208ENST00000444533 OR5A2Q8NGI9 324 aa11.93□□□□□ -0.5
SSBP3-208ENST00000444533 OR14K1Q8NGZ2 314 aa11.93□□□□□ -0.5
SSBP3-208ENST00000444533 DVL3Q92997 716 aaPredicted RBP11.93□□□□□ -0.5
SSBP3-208ENST00000444533 YTHDF1Q9BYJ9 559 aaKnown RBP11.93□□□□□ -0.5
SSBP3-208ENST00000444533 UFSP2Q9NUQ7 469 aa11.93□□□□□ -0.5
SSBP3-208ENST00000444533 FKBP14Q9NWM8 211 aa11.93□□□□□ -0.5
SSBP3-208ENST00000444533 CLEC2DQ9UHP7 191 aa11.93□□□□□ -0.5
SSBP3-208ENST00000444533 PCDHB10Q9UN67 800 aa11.93□□□□□ -0.5
SSBP3-208ENST00000444533 DHDHQ9UQ10 334 aa11.93□□□□□ -0.5
SSBP3-208ENST00000444533 IGHV3-64DA0A0J9YX35 117 aa11.92□□□□□ -0.5
SSBP3-208ENST00000444533 A0A1B0GTI1 187 aa11.92□□□□□ -0.5
SSBP3-208ENST00000444533 ANKRD61A6NGH8 418 aa11.92□□□□□ -0.5
SSBP3-208ENST00000444533 H3BSH0 61 aa11.92□□□□□ -0.5
SSBP3-208ENST00000444533 RP2O75695 350 aa11.92□□□□□ -0.5
SSBP3-208ENST00000444533 INHBBP09529 407 aa11.92□□□□□ -0.5
SSBP3-208ENST00000444533 CRHBPP24387 322 aa11.92□□□□□ -0.5
SSBP3-208ENST00000444533 NANOS3P60323 173 aaKnown RBP11.92□□□□□ -0.5
SSBP3-208ENST00000444533 SLC35A2P78381 396 aa11.92□□□□□ -0.5
SSBP3-208ENST00000444533 MVKQ03426 396 aa11.92□□□□□ -0.5
SSBP3-208ENST00000444533 LOXL1Q08397 574 aaPredicted RBP11.92□□□□□ -0.5
SSBP3-208ENST00000444533 MAB21L1Q13394 359 aa11.92□□□□□ -0.5
SSBP3-208ENST00000444533 CDK5R1Q15078 307 aa11.92□□□□□ -0.5
SSBP3-208ENST00000444533 CNN3Q15417 329 aaKnown RBP11.92□□□□□ -0.5
SSBP3-208ENST00000444533 CEP78Q5JTW2 689 aa11.92□□□□□ -0.5
SSBP3-208ENST00000444533 RNLSQ5VYX0 342 aa11.92□□□□□ -0.5
SSBP3-208ENST00000444533 RDH10Q8IZV5 341 aa11.92□□□□□ -0.5
SSBP3-208ENST00000444533 MUC20Q8N307 709 aaPredicted RBP11.92□□□□□ -0.5
SSBP3-208ENST00000444533 NANOGP1Q8N7R0 232 aa11.92□□□□□ -0.5
SSBP3-208ENST00000444533 GPR148Q8TDV2 347 aa11.92□□□□□ -0.5
SSBP3-208ENST00000444533 OR5P3Q8WZ94 311 aa11.92□□□□□ -0.5
SSBP3-208ENST00000444533 RAB39BQ96DA2 213 aa11.92□□□□□ -0.5
SSBP3-208ENST00000444533 ITPKCQ96DU7 683 aa11.92□□□□□ -0.5
SSBP3-208ENST00000444533 GAL3ST1Q99999 423 aa11.92□□□□□ -0.5
SSBP3-208ENST00000444533 ZNF649Q9BS31 505 aa11.92□□□□□ -0.5
SSBP3-208ENST00000444533 CDCA4Q9BXL8 241 aa11.92□□□□□ -0.5
SSBP3-208ENST00000444533 RNF7Q9UBF6 113 aa11.92□□□□□ -0.5
SSBP3-208ENST00000444533 NPTNQ9Y639 398 aa11.92□□□□□ -0.5
SSBP3-208ENST00000444533 OR4C45A6NMZ5 311 aa11.91□□□□□ -0.5
SSBP3-208ENST00000444533 VWC2LB2RUY7 222 aa11.91□□□□□ -0.5
SSBP3-208ENST00000444533 TMEM178BH3BS89 294 aa11.91□□□□□ -0.5
SSBP3-208ENST00000444533 ZFPL1O95159 310 aa11.91□□□□□ -0.5
SSBP3-208ENST00000444533 GPM6AP51674 278 aa11.91□□□□□ -0.5
SSBP3-208ENST00000444533 BTG1P62324 171 aa11.91□□□□□ -0.5
SSBP3-208ENST00000444533 MED22Q15528 200 aa11.91□□□□□ -0.5
SSBP3-208ENST00000444533 PRAMEF6Q5VXH4 476 aa11.91□□□□□ -0.5
SSBP3-208ENST00000444533 PRSS48Q7RTY5 328 aa11.91□□□□□ -0.5
SSBP3-208ENST00000444533 ZNF573Q86YE8 665 aa11.91□□□□□ -0.5
SSBP3-208ENST00000444533 SPICQ8N5J4 248 aa11.91□□□□□ -0.5
SSBP3-208ENST00000444533 OR1M1Q8NGA1 313 aa11.91□□□□□ -0.5
SSBP3-208ENST00000444533 OR5D14Q8NGL3 314 aa11.91□□□□□ -0.5
SSBP3-208ENST00000444533 ZNF420Q8TAQ5 688 aaPredicted RBP11.91□□□□□ -0.5
SSBP3-208ENST00000444533 Q8TCH9 128 aa11.91□□□□□ -0.5
SSBP3-208ENST00000444533 THRSPQ92748 146 aa11.91□□□□□ -0.5
SSBP3-208ENST00000444533 FGGYQ96C11 551 aa11.91□□□□□ -0.5
SSBP3-208ENST00000444533 SMIM19Q96E16 107 aa11.91□□□□□ -0.5
SSBP3-208ENST00000444533 CPNE2Q96FN4 548 aaPredicted RBP11.91□□□□□ -0.5
SSBP3-208ENST00000444533 COX4I2Q96KJ9 171 aa11.91□□□□□ -0.5
SSBP3-208ENST00000444533 PDCD1LG2Q9BQ51 273 aa11.91□□□□□ -0.5
SSBP3-208ENST00000444533 SOX7Q9BT81 388 aa11.91□□□□□ -0.5
SSBP3-208ENST00000444533 TMUB1Q9BVT8 246 aa11.91□□□□□ -0.5
SSBP3-208ENST00000444533 GPR173Q9NS66 373 aa11.91□□□□□ -0.5
SSBP3-208ENST00000444533 C1orf123Q9NWV4 160 aa11.91□□□□□ -0.5
SSBP3-208ENST00000444533 ZNF281Q9Y2X9 895 aa11.91□□□□□ -0.5
SSBP3-208ENST00000444533 WIPI2Q9Y4P8 454 aa11.91□□□□□ -0.5
SSBP3-208ENST00000444533 CACNG2Q9Y698 323 aa11.91□□□□□ -0.5
SSBP3-208ENST00000444533 LOC100289279A0A1B0GTE1 492 aa11.9□□□□□ -0.5
SSBP3-208ENST00000444533 LRP5LA4QPB2 252 aa11.9□□□□□ -0.5
SSBP3-208ENST00000444533 A6NIN4 97 aa11.9□□□□□ -0.5
SSBP3-208ENST00000444533 ZNF732B4DXR9 585 aa11.9□□□□□ -0.5
SSBP3-208ENST00000444533 E9PI62 339 aa11.9□□□□□ -0.5
SSBP3-208ENST00000444533 MAGEB3O15480 346 aa11.9□□□□□ -0.5
SSBP3-208ENST00000444533 MRPS14O60783 128 aaKnown RBP11.9□□□□□ -0.5
SSBP3-208ENST00000444533 PRKACBP22694 351 aa11.9□□□□□ -0.5
SSBP3-208ENST00000444533 MDH2P40926 338 aaKnown RBP11.9□□□□□ -0.5
SSBP3-208ENST00000444533 GZMKP49863 264 aa11.9□□□□□ -0.5
SSBP3-208ENST00000444533 GTF2A1P52655 376 aaPredicted RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms