RNA–Protein interactions for RNA: ENST00000443780.5

UBE2D4-205, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-205ENST00000443780 SMURF1Q9HCE7 757 aa16.95■□□□□ 0.3
UBE2D4-205ENST00000443780 IKZF2Q9UKS7 526 aa16.95■□□□□ 0.3
UBE2D4-205ENST00000443780 TMEM210A6NLX4 147 aa16.94■□□□□ 0.3
UBE2D4-205ENST00000443780 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.94■□□□□ 0.3
UBE2D4-205ENST00000443780 MUC1P15941 1255 aaPredicted RBP16.94■□□□□ 0.3
UBE2D4-205ENST00000443780 CXCR4P61073 352 aa16.94■□□□□ 0.3
UBE2D4-205ENST00000443780 ZNF829Q3KNS6 432 aaPredicted RBP16.94■□□□□ 0.3
UBE2D4-205ENST00000443780 ZNF322Q6U7Q0 402 aaPredicted RBP16.94■□□□□ 0.3
UBE2D4-205ENST00000443780 RBMS3Q6XE24 437 aaKnown RBP16.94■□□□□ 0.3
UBE2D4-205ENST00000443780 DOK3Q7L591 496 aa16.94■□□□□ 0.3
UBE2D4-205ENST00000443780 KRT74Q7RTS7 529 aa16.94■□□□□ 0.3
UBE2D4-205ENST00000443780 GID4Q8IVV7 300 aa16.94■□□□□ 0.3
UBE2D4-205ENST00000443780 FAM81AQ8TBF8 368 aa16.94■□□□□ 0.3
UBE2D4-205ENST00000443780 PYDC1Q8WXC3 89 aa16.94■□□□□ 0.3
UBE2D4-205ENST00000443780 ITFG2Q969R8 447 aa16.94■□□□□ 0.3
UBE2D4-205ENST00000443780 RNF170Q96K19 258 aa16.94■□□□□ 0.3
UBE2D4-205ENST00000443780 MNTQ99583 582 aa16.94■□□□□ 0.3
UBE2D4-205ENST00000443780 OSBPL10Q9BXB5 764 aa16.94■□□□□ 0.3
UBE2D4-205ENST00000443780 FGF23Q9GZV9 251 aaPredicted RBP16.94■□□□□ 0.3
UBE2D4-205ENST00000443780 RASSF4Q9H2L5 321 aa16.94■□□□□ 0.3
UBE2D4-205ENST00000443780 HAO2Q9NYQ3 351 aa16.94■□□□□ 0.3
UBE2D4-205ENST00000443780 KAAG1Q9UBP8 84 aa16.94■□□□□ 0.3
UBE2D4-205ENST00000443780 NUFIP1Q9UHK0 495 aaKnown RBP16.94■□□□□ 0.3
UBE2D4-205ENST00000443780 ANK2Q01484 3957 aa16.94■□□□□ 0.3
UBE2D4-205ENST00000443780 IGHV3OR16-10A0A075B7F0 116 aa16.93■□□□□ 0.3
UBE2D4-205ENST00000443780 ZNF816-ZNF321PA0A0X1KG74 233 aa16.93■□□□□ 0.3
UBE2D4-205ENST00000443780 SAC3D1A6NKF1 404 aa16.93■□□□□ 0.3
UBE2D4-205ENST00000443780 SRRM5B3KS81 715 aa16.93■□□□□ 0.3
UBE2D4-205ENST00000443780 FCN3O75636 299 aa16.93■□□□□ 0.3
UBE2D4-205ENST00000443780 IGLV3-1P01715 115 aa16.93■□□□□ 0.3
UBE2D4-205ENST00000443780 FGF12P61328 243 aa16.93■□□□□ 0.3
UBE2D4-205ENST00000443780 ACTG1P63261 375 aa16.93■□□□□ 0.3
UBE2D4-205ENST00000443780 MICBQ29980 383 aa16.93■□□□□ 0.3
UBE2D4-205ENST00000443780 FAM76BQ5HYJ3 339 aa16.93■□□□□ 0.3
UBE2D4-205ENST00000443780 ZDHHC23Q8IYP9 409 aa16.93■□□□□ 0.3
UBE2D4-205ENST00000443780 HPSE2Q8WWQ2 592 aa16.93■□□□□ 0.3
UBE2D4-205ENST00000443780 RPL3LQ92901 407 aaKnown RBP16.93■□□□□ 0.3
UBE2D4-205ENST00000443780 PPP1R14AQ96A00 147 aa16.93■□□□□ 0.3
UBE2D4-205ENST00000443780 APOL4Q9BPW4 351 aa16.93■□□□□ 0.3
UBE2D4-205ENST00000443780 GABARAPL3Q9BY60 117 aa16.93■□□□□ 0.3
UBE2D4-205ENST00000443780 MS4A7Q9GZW8 240 aaPredicted RBP16.93■□□□□ 0.3
UBE2D4-205ENST00000443780 GPR84Q9NQS5 396 aa16.93■□□□□ 0.3
UBE2D4-205ENST00000443780 CLN6Q9NWW5 311 aa16.93■□□□□ 0.3
UBE2D4-205ENST00000443780 TRAV40A0A0B4J280 105 aa16.92■□□□□ 0.3
UBE2D4-205ENST00000443780 DVL1O14640 695 aa16.92■□□□□ 0.3
UBE2D4-205ENST00000443780 TMPRSS2O15393 492 aa16.92■□□□□ 0.3
UBE2D4-205ENST00000443780 MAGEB4O15481 346 aaPredicted RBP16.92■□□□□ 0.3
UBE2D4-205ENST00000443780 SRSF10O75494 262 aaKnown RBP16.92■□□□□ 0.3
UBE2D4-205ENST00000443780 PLATP00750 562 aa16.92■□□□□ 0.3
UBE2D4-205ENST00000443780 LIPFP07098 398 aa16.92■□□□□ 0.3
UBE2D4-205ENST00000443780 ATP6V1B1P15313 513 aa16.92■□□□□ 0.3
UBE2D4-205ENST00000443780 ACTR3P61158 418 aa16.92■□□□□ 0.3
UBE2D4-205ENST00000443780 UBA52P62987 128 aaKnown RBP16.92■□□□□ 0.3
UBE2D4-205ENST00000443780 MFGE8Q08431 387 aaPredicted RBP16.92■□□□□ 0.3
UBE2D4-205ENST00000443780 CCDC121Q6ZUS5 278 aa16.92■□□□□ 0.3
UBE2D4-205ENST00000443780 KCTD8Q6ZWB6 473 aa16.92■□□□□ 0.3
UBE2D4-205ENST00000443780 COMMD2Q86X83 199 aa16.92■□□□□ 0.3
UBE2D4-205ENST00000443780 SCCPDHQ8NBX0 429 aa16.92■□□□□ 0.3
UBE2D4-205ENST00000443780 OR10Z1Q8NGY1 313 aa16.92■□□□□ 0.3
UBE2D4-205ENST00000443780 OR51E1Q8TCB6 317 aa16.92■□□□□ 0.3
UBE2D4-205ENST00000443780 SEH1LQ96EE3 360 aa16.92■□□□□ 0.3
UBE2D4-205ENST00000443780 ZNF48Q96MX3 618 aaPredicted RBP16.92■□□□□ 0.3
UBE2D4-205ENST00000443780 HIST1H2AAQ96QV6 131 aa16.92■□□□□ 0.3
UBE2D4-205ENST00000443780 RBM4BQ9BQ04 359 aaKnown RBP16.92■□□□□ 0.3
UBE2D4-205ENST00000443780 RIBC2Q9H4K1 309 aa16.92■□□□□ 0.3
UBE2D4-205ENST00000443780 WARS2Q9UGM6 360 aaKnown RBP16.92■□□□□ 0.3
UBE2D4-205ENST00000443780 TMEM89A2RUT3 159 aa16.91■□□□□ 0.3
UBE2D4-205ENST00000443780 ZNF670-ZNF695F2Z2N8 137 aa16.91■□□□□ 0.3
UBE2D4-205ENST00000443780 TTRP02766 147 aa16.91■□□□□ 0.3
UBE2D4-205ENST00000443780 ELF3P78545 371 aaPredicted RBP16.91■□□□□ 0.3
UBE2D4-205ENST00000443780 C11orf91Q3C1V1 193 aa16.91■□□□□ 0.3
UBE2D4-205ENST00000443780 WDR38Q5JTN6 314 aa16.91■□□□□ 0.3
UBE2D4-205ENST00000443780 C12orf54Q6X4T0 127 aa16.91■□□□□ 0.3
UBE2D4-205ENST00000443780 C9orf139Q6ZV77 190 aa16.91■□□□□ 0.3
UBE2D4-205ENST00000443780 OR51G2Q8NGK0 314 aa16.91■□□□□ 0.3
UBE2D4-205ENST00000443780 C12orf43Q96C57 262 aaKnown RBP16.91■□□□□ 0.3
UBE2D4-205ENST00000443780 FAM71F1Q96KD3 344 aaPredicted RBP16.91■□□□□ 0.3
UBE2D4-205ENST00000443780 CCL13Q99616 98 aa16.91■□□□□ 0.3
UBE2D4-205ENST00000443780 ZNF879B4DU55 563 aa16.9■□□□□ 0.3
UBE2D4-205ENST00000443780 LOC110117498-PIK3R3F6TDL0 507 aa16.9■□□□□ 0.3
UBE2D4-205ENST00000443780 GPM6AP51674 278 aa16.9■□□□□ 0.3
UBE2D4-205ENST00000443780 EGR3Q06889 387 aa16.9■□□□□ 0.3
UBE2D4-205ENST00000443780 RIPPLY1Q0D2K3 151 aa16.9■□□□□ 0.3
UBE2D4-205ENST00000443780 KPNB1Q14974 876 aaKnown RBP16.9■□□□□ 0.3
UBE2D4-205ENST00000443780 ZBTB37Q5TC79 503 aa16.9■□□□□ 0.3
UBE2D4-205ENST00000443780 BTN2A1Q7KYR7 527 aa16.9■□□□□ 0.3
UBE2D4-205ENST00000443780 THAP5Q7Z6K1 395 aa16.9■□□□□ 0.3
UBE2D4-205ENST00000443780 PNLDC1Q8NA58 520 aaKnown RBP16.9■□□□□ 0.3
UBE2D4-205ENST00000443780 OR8J1Q8NGP2 316 aa16.9■□□□□ 0.3
UBE2D4-205ENST00000443780 GCDHQ92947 438 aaPredicted RBP16.9■□□□□ 0.3
UBE2D4-205ENST00000443780 WDR13Q9H1Z4 485 aa16.9■□□□□ 0.3
UBE2D4-205ENST00000443780 MOB1AQ9H8S9 216 aa16.9■□□□□ 0.3
UBE2D4-205ENST00000443780 MRM2Q9UI43 246 aaKnown RBP16.9■□□□□ 0.3
UBE2D4-205ENST00000443780 GTF2A1LQ9UNN4 478 aa16.9■□□□□ 0.3
UBE2D4-205ENST00000443780 PIGLQ9Y2B2 252 aa16.9■□□□□ 0.3
UBE2D4-205ENST00000443780 SOX21Q9Y651 276 aaPredicted RBP16.9■□□□□ 0.3
UBE2D4-205ENST00000443780 R4GMQ9 66 aa16.9■□□□□ 0.3
UBE2D4-205ENST00000443780 A0A1B0GW55 424 aa16.89■□□□□ 0.29
UBE2D4-205ENST00000443780 ZNF732B4DXR9 585 aa16.89■□□□□ 0.29
UBE2D4-205ENST00000443780 H3BNX3 289 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms