RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 GOLGA8JA6NMD2 632 aa2.1□□□□□ -2.07
TRAPPC13-204ENST00000438419 TNFRSF11BO00300 401 aa2.1□□□□□ -2.07
TRAPPC13-204ENST00000438419 EIF1BO60739 113 aaKnown RBP2.1□□□□□ -2.07
TRAPPC13-204ENST00000438419 CTNSO60931 367 aa2.1□□□□□ -2.07
TRAPPC13-204ENST00000438419 GLSO94925 669 aaPredicted RBP2.1□□□□□ -2.07
TRAPPC13-204ENST00000438419 SNAI1O95863 264 aaPredicted RBP2.1□□□□□ -2.07
TRAPPC13-204ENST00000438419 HLA-DQB1P01920 261 aa2.1□□□□□ -2.07
TRAPPC13-204ENST00000438419 GOLGA8HP0CJ92 632 aa2.1□□□□□ -2.07
TRAPPC13-204ENST00000438419 GFAPP14136 432 aa2.1□□□□□ -2.07
TRAPPC13-204ENST00000438419 MUC1P15941 1255 aaPredicted RBP2.1□□□□□ -2.07
TRAPPC13-204ENST00000438419 ME2P23368 584 aa2.1□□□□□ -2.07
TRAPPC13-204ENST00000438419 LOXP28300 417 aaPredicted RBP2.1□□□□□ -2.07
TRAPPC13-204ENST00000438419 NUP62P37198 522 aaPredicted RBP2.1□□□□□ -2.07
TRAPPC13-204ENST00000438419 EIF1P41567 113 aaKnown RBP2.1□□□□□ -2.07
TRAPPC13-204ENST00000438419 CXCL12P48061 93 aa2.1□□□□□ -2.07
TRAPPC13-204ENST00000438419 PITPNAQ00169 270 aa2.1□□□□□ -2.07
TRAPPC13-204ENST00000438419 PPIDQ08752 370 aaKnown RBP2.1□□□□□ -2.07
TRAPPC13-204ENST00000438419 PNOCQ13519 176 aa2.1□□□□□ -2.07
TRAPPC13-204ENST00000438419 PIGHQ14442 188 aaPredicted RBP2.1□□□□□ -2.07
TRAPPC13-204ENST00000438419 STK38Q15208 465 aa2.1□□□□□ -2.07
TRAPPC13-204ENST00000438419 OR1Q1Q15612 314 aa2.1□□□□□ -2.07
TRAPPC13-204ENST00000438419 RNASE13Q5GAN3 156 aaKnown RBP2.1□□□□□ -2.07
TRAPPC13-204ENST00000438419 AP1ARQ63HQ0 302 aa2.1□□□□□ -2.07
TRAPPC13-204ENST00000438419 OPN5Q6U736 354 aa2.1□□□□□ -2.07
TRAPPC13-204ENST00000438419 SLC35D2Q76EJ3 337 aa2.1□□□□□ -2.07
TRAPPC13-204ENST00000438419 OR2W3Q7Z3T1 314 aa2.1□□□□□ -2.07
TRAPPC13-204ENST00000438419 MDP1Q86V88 176 aa2.1□□□□□ -2.07
TRAPPC13-204ENST00000438419 ARHGAP18Q8N392 663 aa2.1□□□□□ -2.07
TRAPPC13-204ENST00000438419 ZNF561Q8N587 486 aa2.1□□□□□ -2.07
TRAPPC13-204ENST00000438419 TTLQ8NG68 377 aa2.1□□□□□ -2.07
TRAPPC13-204ENST00000438419 CDS1Q92903 461 aa2.1□□□□□ -2.07
TRAPPC13-204ENST00000438419 OR10C1Q96KK4 312 aa2.1□□□□□ -2.07
TRAPPC13-204ENST00000438419 C1orf198Q9H425 327 aa2.1□□□□□ -2.07
TRAPPC13-204ENST00000438419 ARMC7Q9H6L4 198 aa2.1□□□□□ -2.07
TRAPPC13-204ENST00000438419 OPN4Q9UHM6 478 aa2.1□□□□□ -2.07
TRAPPC13-204ENST00000438419 ENOPH1Q9UHY7 261 aa2.1□□□□□ -2.07
TRAPPC13-204ENST00000438419 CES1P1Q9UKY3 287 aa2.1□□□□□ -2.07
TRAPPC13-204ENST00000438419 RFNGQ9Y644 331 aa2.1□□□□□ -2.07
TRAPPC13-204ENST00000438419 KDM5BQ9UGL1 1544 aa2.1□□□□□ -2.07
TRAPPC13-204ENST00000438419 PKD1L2Q7Z442 2459 aa2.1□□□□□ -2.07
TRAPPC13-204ENST00000438419 UTRNP46939 3433 aa2.1□□□□□ -2.07
TRAPPC13-204ENST00000438419 VWDEQ8N2E2 1590 aa2.1□□□□□ -2.07
TRAPPC13-204ENST00000438419 FAM135BQ49AJ0 1406 aa2.1□□□□□ -2.07
TRAPPC13-204ENST00000438419 TRAPPC8Q9Y2L5 1435 aa2.1□□□□□ -2.07
TRAPPC13-204ENST00000438419 PDE4DIPQ5VU43 2346 aa2.1□□□□□ -2.07
TRAPPC13-204ENST00000438419 CDK13Q14004 1512 aaKnown RBP2.09□□□□□ -2.07
TRAPPC13-204ENST00000438419 A0A0J9YYE9 177 aa2.09□□□□□ -2.07
TRAPPC13-204ENST00000438419 SPRR5A0A1B0GTR4 108 aa2.09□□□□□ -2.07
TRAPPC13-204ENST00000438419 DFFAO00273 331 aa2.09□□□□□ -2.07
TRAPPC13-204ENST00000438419 LCA5LO95447 670 aa2.09□□□□□ -2.07
TRAPPC13-204ENST00000438419 ETHE1O95571 254 aa2.09□□□□□ -2.07
TRAPPC13-204ENST00000438419 CCNE2O96020 404 aa2.09□□□□□ -2.07
TRAPPC13-204ENST00000438419 PAHP00439 452 aa2.09□□□□□ -2.07
TRAPPC13-204ENST00000438419 PTHP01270 115 aa2.09□□□□□ -2.07
TRAPPC13-204ENST00000438419 GCGP01275 180 aa2.09□□□□□ -2.07
TRAPPC13-204ENST00000438419 IGHV3-11P01762 117 aa2.09□□□□□ -2.07
TRAPPC13-204ENST00000438419 TRBC1P01850 177 aa2.09□□□□□ -2.07
TRAPPC13-204ENST00000438419 THRAP10827 490 aa2.09□□□□□ -2.07
TRAPPC13-204ENST00000438419 HOXB8P17481 243 aaPredicted RBP2.09□□□□□ -2.07
TRAPPC13-204ENST00000438419 PTNP21246 168 aa2.09□□□□□ -2.07
TRAPPC13-204ENST00000438419 APLNRP35414 380 aa2.09□□□□□ -2.07
TRAPPC13-204ENST00000438419 CSKP41240 450 aa2.09□□□□□ -2.07
TRAPPC13-204ENST00000438419 UBE2E1P51965 193 aa2.09□□□□□ -2.07
TRAPPC13-204ENST00000438419 IFITM3Q01628 133 aa2.09□□□□□ -2.07
TRAPPC13-204ENST00000438419 SIGLEC14Q08ET2 396 aa2.09□□□□□ -2.07
TRAPPC13-204ENST00000438419 NAB1Q13506 487 aa2.09□□□□□ -2.07
TRAPPC13-204ENST00000438419 HNRNPA1L2Q32P51 320 aaKnown RBP2.09□□□□□ -2.07
TRAPPC13-204ENST00000438419 C6orf183Q5T699 404 aa2.09□□□□□ -2.07
TRAPPC13-204ENST00000438419 ZNF880Q6PDB4 577 aa2.09□□□□□ -2.07
TRAPPC13-204ENST00000438419 TMPRSS11AQ6ZMR5 421 aa2.09□□□□□ -2.07
TRAPPC13-204ENST00000438419 SHISA6Q6ZSJ9 500 aa2.09□□□□□ -2.07
TRAPPC13-204ENST00000438419 NDUFAF7Q7L592 441 aa2.09□□□□□ -2.07
TRAPPC13-204ENST00000438419 PDCL2Q8N4E4 241 aa2.09□□□□□ -2.07
TRAPPC13-204ENST00000438419 MITD1Q8WV92 249 aa2.09□□□□□ -2.07
TRAPPC13-204ENST00000438419 RXFP2Q8WXD0 754 aa2.09□□□□□ -2.07
TRAPPC13-204ENST00000438419 OR8D1Q8WZ84 308 aa2.09□□□□□ -2.07
TRAPPC13-204ENST00000438419 TMEM159Q96B96 161 aa2.09□□□□□ -2.07
TRAPPC13-204ENST00000438419 UBE2E2Q96LR5 201 aa2.09□□□□□ -2.07
TRAPPC13-204ENST00000438419 TEAD3Q99594 435 aa2.09□□□□□ -2.07
TRAPPC13-204ENST00000438419 KCNS3Q9BQ31 491 aa2.09□□□□□ -2.07
TRAPPC13-204ENST00000438419 SCRT1Q9BWW7 348 aa2.09□□□□□ -2.07
TRAPPC13-204ENST00000438419 OSBPL11Q9BXB4 747 aa2.09□□□□□ -2.07
TRAPPC13-204ENST00000438419 RSPO3Q9BXY4 272 aaPredicted RBP2.09□□□□□ -2.07
TRAPPC13-204ENST00000438419 TOLLIPQ9H0E2 274 aa2.09□□□□□ -2.07
TRAPPC13-204ENST00000438419 GAL3ST2Q9H3Q3 398 aa2.09□□□□□ -2.07
TRAPPC13-204ENST00000438419 ZNF442Q9H7R0 627 aa2.09□□□□□ -2.07
TRAPPC13-204ENST00000438419 LZTFL1Q9NQ48 299 aa2.09□□□□□ -2.07
TRAPPC13-204ENST00000438419 FBXO6Q9NRD1 293 aaPredicted RBP2.09□□□□□ -2.07
TRAPPC13-204ENST00000438419 RBFOX1Q9NWB1 397 aaKnown RBP2.09□□□□□ -2.07
TRAPPC13-204ENST00000438419 ZNF835Q9Y2P0 537 aa2.09□□□□□ -2.07
TRAPPC13-204ENST00000438419 ZNF257Q9Y2Q1 563 aa2.09□□□□□ -2.07
TRAPPC13-204ENST00000438419 OR51B2Q9Y5P1 312 aa2.09□□□□□ -2.07
TRAPPC13-204ENST00000438419 KDM5CP41229 1560 aa2.09□□□□□ -2.07
TRAPPC13-204ENST00000438419 ZCCHC11Q5TAX3 1644 aaKnown RBP2.09□□□□□ -2.07
TRAPPC13-204ENST00000438419 LOXHD1Q8IVV2 1947 aa2.09□□□□□ -2.07
TRAPPC13-204ENST00000438419 C3P01024 1663 aa2.09□□□□□ -2.07
TRAPPC13-204ENST00000438419 ROBO1Q9Y6N7 1651 aa2.09□□□□□ -2.07
TRAPPC13-204ENST00000438419 PHLPP1O60346 1717 aa2.09□□□□□ -2.07
TRAPPC13-204ENST00000438419 SUPT6HQ7KZ85 1726 aaKnown RBP2.09□□□□□ -2.07
TRAPPC13-204ENST00000438419 SHANK3Q9BYB0 1731 aa2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms